RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 RALYQ9UKM9 306 aaKnown RBP10.11□□□□□ -0.79
PTPN20-216ENST00000506080 ACKR2O00590 384 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 WNT7AO00755 349 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 ZNF197O14709 1029 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 ZNF263O14978 683 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 CDKL5O76039 1030 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 ABLIM3O94929 683 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 PSMC3P17980 439 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 KRT2P35908 639 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 RBM25P49756 843 aaKnown RBP10.1□□□□□ -0.79
PTPN20-216ENST00000506080 SOX4Q06945 474 aaPredicted RBP10.1□□□□□ -0.79
PTPN20-216ENST00000506080 CSRP2Q16527 193 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 CYP4A22Q5TCH4 519 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 SLC8B1Q6J4K2 584 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 DEPTORQ8TB45 409 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 SMARCD2Q92925 531 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 UROC1Q96N76 676 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 IER2Q9BTL4 223 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 KIFC3Q9BVG8 833 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 CCDC113Q9H0I3 377 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 RBM12Q9NTZ6 932 aaKnown RBP10.1□□□□□ -0.79
PTPN20-216ENST00000506080 INSL5Q9Y5Q6 135 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 NCANO14594 1321 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 TICRRQ7Z2Z1 1910 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 F5P12259 2224 aa10.1□□□□□ -0.79
PTPN20-216ENST00000506080 HEPACAM2A8MVW5 462 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 NEMFO60524 1076 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 MOSPD3O75425 235 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 MED24O75448 989 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 REC8O95072 547 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 SPATA31C1P0DKV0 1188 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 MYL4P12829 197 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 XRCC6P12956 609 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTPN20-216ENST00000506080 ATF2P15336 505 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 HOXC13P31276 330 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 SOX9P48436 509 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 OSTNP61366 133 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 DCAF4L1Q3SXM0 396 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 CEP68Q76N32 757 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 CENPQQ7L2Z9 268 aaPredicted RBP10.09□□□□□ -0.79
PTPN20-216ENST00000506080 TCEAL8Q8IYN2 117 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 ELMOD1Q8N336 334 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 FAM160A2Q8N612 972 aaPredicted RBP10.09□□□□□ -0.79
PTPN20-216ENST00000506080 CEP120Q8N960 986 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 ZSCAN18Q8TBC5 510 aaPredicted RBP10.09□□□□□ -0.79
PTPN20-216ENST00000506080 DEPDC1BQ8WUY9 529 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 TNFRSF25Q93038 417 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 SLITRK6Q9H5Y7 841 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 PDRG1Q9NUG6 133 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 ORC3Q9UBD5 711 aaPredicted RBP10.09□□□□□ -0.79
PTPN20-216ENST00000506080 COL4A2P08572 1712 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 STK36Q9NRP7 1315 aa10.09□□□□□ -0.79
PTPN20-216ENST00000506080 SMIM28A0A1B0GU29 152 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 SLC38A8A6NNN8 435 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 H7C4K7 107 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 PODXLO00592 558 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 MICAL2O94851 1124 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 NAMPTP43490 491 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 KPNA1P52294 538 aaPredicted RBP10.08□□□□□ -0.8
PTPN20-216ENST00000506080 TWF1Q12792 350 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 TEAD2Q15562 447 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 CCDC6Q16204 474 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
PTPN20-216ENST00000506080 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 N4BP2L1Q5TBK1 243 aaPredicted RBP10.08□□□□□ -0.8
PTPN20-216ENST00000506080 NT5DC1Q5TFE4 455 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 ATF7IP2Q5U623 682 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 IQCEQ6IPM2 695 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 Q6ZS52 159 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 LONP2Q86WA8 852 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 CATSPER3Q86XQ3 398 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 MFSD6LQ8IWD5 586 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 SPEM1Q8N4L4 309 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 TTC8Q8TAM2 541 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 CSGALNACT1Q8TDX6 532 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 ZNF512Q96ME7 567 aaPredicted RBP10.08□□□□□ -0.8
PTPN20-216ENST00000506080 TMEM60Q9H2L4 133 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 BRMS1Q9HCU9 246 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 TRPV5Q9NQA5 729 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 C2orf42Q9NWW7 574 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 CEP72Q9P209 647 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 FBXL5Q9UKA1 691 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 ANGPTL2Q9UKU9 493 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 CFAP47Q6ZTR5 3102 aa10.08□□□□□ -0.8
PTPN20-216ENST00000506080 ARHGEF35A5YM69 484 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 K7ESF4 209 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 ARNTLO00327 626 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 AXIN1O15169 862 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 CTDNEP1O95476 244 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 CYP11B2P19099 503 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 CNR2P34972 360 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
PTPN20-216ENST00000506080 LRRC32Q14392 662 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 SF3A2Q15428 464 aaKnown RBP10.07□□□□□ -0.8
PTPN20-216ENST00000506080 CTXN3Q4LDR2 81 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 YAF2Q8IY57 180 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 SHKBP1Q8TBC3 707 aa10.07□□□□□ -0.8
PTPN20-216ENST00000506080 DDX1Q92499 740 aaKnown RBP10.07□□□□□ -0.8
PTPN20-216ENST00000506080 RSPRY1Q96DX4 576 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms