RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.06
FDPS-219ENST00000495308 TAF6P49848 677 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 CLCN4P51793 760 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 DLG4P78352 724 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 DUOXA2Q1HG44 320 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 EDRF1Q3B7T1 1238 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 VARS2Q5ST30 1063 aaKnown RBP14.66□□□□□ -0.06
FDPS-219ENST00000495308 RSPO2Q6UXX9 243 aaPredicted RBP14.66□□□□□ -0.06
FDPS-219ENST00000495308 PALB2Q86YC2 1186 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 FAM186BQ8IYM0 893 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 TRIML1Q8N9V2 468 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 CXorf38Q8TB03 319 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 PARD3BQ8TEW8 1205 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 SLC22A17Q8WUG5 538 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 NELFBQ8WX92 580 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 ZNF516Q92618 1163 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 DHTKD1Q96HY7 919 aaPredicted RBP14.66□□□□□ -0.06
FDPS-219ENST00000495308 CLSTN3Q9BQT9 956 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.66□□□□□ -0.06
FDPS-219ENST00000495308 FNIP2Q9P278 1114 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 ITGA11Q9UKX5 1188 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 PCDHB8Q9UN66 801 aa14.66□□□□□ -0.06
FDPS-219ENST00000495308 FSD2A1L4K1 749 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 SYN3O14994 580 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 SPATA31D3P0C874 917 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 TRIM49P0CI25 452 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 TRIM49CP0CI26 452 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 KCNQ1P51787 676 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 STX17P56962 302 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 CREMQ03060 361 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 BFSP1Q12934 665 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 SV2CQ496J9 727 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 SPATA31D4Q6ZUB0 917 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 TRAPPC11Q7Z392 1133 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 GPR65Q8IYL9 337 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 SENP8Q96LD8 212 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 ZNF560Q96MR9 790 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 MTRRQ9UBK8 725 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 CDY1Q9Y6F8 540 aa14.65□□□□□ -0.06
FDPS-219ENST00000495308 CETN3O15182 167 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 TGM5O43548 720 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 MBD3O95983 291 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 SRGAP2BP0DMP2 458 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 ODC1P11926 461 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 OR1D2P34982 312 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 PSMC2P35998 433 aaKnown RBP14.64□□□□□ -0.07
FDPS-219ENST00000495308 PPP1R2P41236 205 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 RBP5P82980 135 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 LRRC63Q05C16 580 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 C1orf220Q5T0J3 134 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 PDXDC1Q6P996 788 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 ANKS3Q6ZW76 656 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 PPFIBP1Q86W92 1011 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 ZC3H3Q8IXZ2 948 aaKnown RBP14.64□□□□□ -0.07
FDPS-219ENST00000495308 APPL2Q8NEU8 664 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 CASP10Q92851 521 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 BORCS6Q96GS4 357 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 MSLNLQ96KJ4 702 aa14.64□□□□□ -0.07
FDPS-219ENST00000495308 DUSP9Q99956 384 aaKnown RBP14.64□□□□□ -0.07
FDPS-219ENST00000495308 MUC3AQ02505 3323 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 KPNA7A9QM74 516 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 CYB561D2O14569 222 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 MAPK13O15264 365 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 GLUD1P00367 558 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 CST3P01034 146 aaPredicted RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 EPB41P11171 864 aaKnown RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 PNPLA4P41247 253 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 VAMP7P51809 220 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 CLDN10P78369 228 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 FKBP3Q00688 224 aaKnown RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 YWHAHQ04917 246 aaPredicted RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 PAK1Q13153 545 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 BIRC3Q13489 604 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 MRPL58Q14197 206 aaKnown RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 LEXMQ3ZCV2 418 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 CTXN3Q4LDR2 81 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 TDRD10Q5VZ19 366 aaKnown RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 ZNF280DQ6N043 979 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 TTI2Q6NXR4 508 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 ANKRD54Q6NXT1 300 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 SYCE2Q6PIF2 218 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 TMEM184AQ6ZMB5 413 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 INTS8Q75QN2 995 aaKnown RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 LRRC52Q8N7C0 313 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 C12orf76Q8N812 135 aaPredicted RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 FEZF2Q8TBJ5 459 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 TMC2Q8TDI7 906 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 ATXN2LQ8WWM7 1075 aaKnown RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 MAN1C1Q9NR34 630 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 CD207Q9UJ71 328 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 FBXL5Q9UKA1 691 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
FDPS-219ENST00000495308 BACE2Q9Y5Z0 518 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 DENND4AQ7Z401 1863 aa14.63□□□□□ -0.07
FDPS-219ENST00000495308 H7C4K7 107 aa14.62□□□□□ -0.07
FDPS-219ENST00000495308 TBC1D4O60343 1298 aa14.62□□□□□ -0.07
FDPS-219ENST00000495308 PHACTR2O75167 634 aa14.62□□□□□ -0.07
FDPS-219ENST00000495308 C4BPAP04003 597 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms