RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.2■□□□□ 0.02
VTI1A-206ENST00000489142 IGSF9Q9P2J2 1179 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 FBXL21Q9UKT6 434 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 PCDHA7Q9UN72 937 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 DUSP12Q9UNI6 340 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 EXOC7Q9UPT5 735 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
VTI1A-206ENST00000489142 COL4A3Q01955 1670 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 LRG1P02750 347 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 ATF2P15336 505 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 AARSP49588 968 aaKnown RBP eCLIP15.19■□□□□ 0.02
VTI1A-206ENST00000489142 LILRA4P59901 499 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 ASIC1P78348 528 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 HTR4Q13639 388 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 UVSSAQ2YD98 709 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 PARM1Q6UWI2 310 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 CD302Q8IX05 232 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 SLC44A3Q8N4M1 653 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 FGF13Q92913 245 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 SENP8Q96LD8 212 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 TMEM209Q96SK2 561 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 BLZF1Q9H2G9 400 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 TNMDQ9H2S6 317 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 MFSD1Q9H3U5 465 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 CDH7Q9ULB5 785 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 ARIH1Q9Y4X5 557 aaPredicted RBP15.19■□□□□ 0.02
VTI1A-206ENST00000489142 PCDHB13Q9Y5F0 798 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 INSL5Q9Y5Q6 135 aa15.19■□□□□ 0.02
VTI1A-206ENST00000489142 NRG2O14511 850 aaPredicted RBP15.18■□□□□ 0.02
VTI1A-206ENST00000489142 POLR2DO15514 142 aaKnown RBP15.18■□□□□ 0.02
VTI1A-206ENST00000489142 VNN2O95498 520 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 RHOP08100 348 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 AVPR2P30518 371 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 SCARA3Q6AZY7 606 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 OVOS1Q6IE37 1185 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 USP37Q86T82 979 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 TCEAL8Q8IYN2 117 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 GRAMD1CQ8IYS0 662 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 SIX5Q8N196 739 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 TMEM105Q8N8V8 129 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 FLCNQ8NFG4 579 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 FGF14Q92915 247 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 KXD1Q9BQD3 176 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 CORO1BQ9BR76 489 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 TRIM9Q9C026 710 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 DPP3Q9NY33 737 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 CA14Q9ULX7 337 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 DERAQ9Y315 318 aa15.18■□□□□ 0.02
VTI1A-206ENST00000489142 ANO9A1A5B4 782 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 ARHGEF37A1IGU5 675 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 ANHXE9PGG2 379 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 PIRO00625 290 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 OAZ2O95190 189 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 CEBPBP17676 345 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 NHLH1Q02575 133 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 TWF1Q12792 350 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 POSTNQ15063 836 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 POTEHQ6S545 545 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 NPAS3Q8IXF0 933 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 HS6ST3Q8IZP7 471 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 IQUBQ8NA54 791 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 TCEAL4Q96EI5 215 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 MCRS1Q96EZ8 462 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 ASB7Q9H672 318 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 RBAKQ9NYW8 714 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-206ENST00000489142 MRPS23Q9Y3D9 190 aaKnown RBP15.17■□□□□ 0.02
VTI1A-206ENST00000489142 C2CD2Q9Y426 696 aa15.17■□□□□ 0.02
VTI1A-206ENST00000489142 SOAT2O75908 522 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 IL18RAPO95256 599 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 POU2F2P09086 479 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 ODC1P11926 461 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 HOXD13P35453 343 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 CCR2P41597 374 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 AFMP43652 599 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 TFAMQ00059 246 aaKnown RBP15.16■□□□□ 0.02
VTI1A-206ENST00000489142 TCF15Q12870 199 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 ALCAMQ13740 583 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 RESP18Q5W5W9 173 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 TPGS2Q68CL5 300 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 LMBRD2Q68DH5 695 aaPredicted RBP15.16■□□□□ 0.02
VTI1A-206ENST00000489142 CWF19L1Q69YN2 538 aaKnown RBP15.16■□□□□ 0.02
VTI1A-206ENST00000489142 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 BRSK2Q8IWQ3 736 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 TTC9BQ8N6N2 239 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 OR10T2Q8NGX3 314 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 GPR152Q8TDT2 470 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 TSPAN18Q96SJ8 248 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 PHOX2BQ99453 314 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 PYM1Q9BRP8 204 aaKnown RBP15.16■□□□□ 0.02
VTI1A-206ENST00000489142 CUEDC2Q9H467 287 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 CEP72Q9P209 647 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 AFF4Q9UHB7 1163 aaKnown RBP15.16■□□□□ 0.02
VTI1A-206ENST00000489142 SLC27A5Q9Y2P5 690 aa15.16■□□□□ 0.02
VTI1A-206ENST00000489142 ZDHHC9Q9Y397 364 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms