RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GJA1P17302 382 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 CSRP1P21291 193 aaKnown RBP8.4□□□□□ -1.06
PDPN-205ENST00000487038 CCT2P78371 535 aaKnown RBP8.4□□□□□ -1.06
PDPN-205ENST00000487038 AMPD2Q01433 879 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 PPP2R5AQ15172 486 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 PLK5Q496M5 336 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 CTXN3Q4LDR2 81 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 ARHGAP15Q53QZ3 475 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 TCEAL6Q6IPX3 200 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 RASEFQ8IZ41 740 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 HS6ST3Q8IZP7 471 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 APPL2Q8NEU8 664 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 DEPTORQ8TB45 409 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 GATA6Q92908 595 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 TCEAL3Q969E4 200 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 COL26A1Q96A83 441 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 JAKMIP1Q96N16 626 aaKnown RBP8.4□□□□□ -1.06
PDPN-205ENST00000487038 OXCT2Q9BYC2 517 aaPredicted RBP8.4□□□□□ -1.06
PDPN-205ENST00000487038 SMOC1Q9H4F8 434 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 GOLGA2P5Q9HBQ8 144 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 THG1LQ9NWX6 298 aaKnown RBP8.4□□□□□ -1.06
PDPN-205ENST00000487038 OBP2AQ9NY56 170 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 GTSE1Q9NYZ3 720 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 FBXL5Q9UKA1 691 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 TPCN1Q9ULQ1 816 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 NEUROG3Q9Y4Z2 214 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 CEP192Q8TEP8 1941 aa8.4□□□□□ -1.06
PDPN-205ENST00000487038 ANK1P16157 1881 aa8.4□□□□□ -1.07
PDPN-205ENST00000487038 ACACAQ13085 2346 aa8.4□□□□□ -1.07
PDPN-205ENST00000487038 HELZP42694 1942 aaKnown RBP8.39□□□□□ -1.07
PDPN-205ENST00000487038 LNP1A1A4G5 178 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 NRG2O14511 850 aaPredicted RBP8.39□□□□□ -1.07
PDPN-205ENST00000487038 GIPC1O14908 333 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 EXTL3O43909 919 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 MOSPD3O75425 235 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 CAVIN2O95810 425 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 XRCC6P12956 609 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDPN-205ENST00000487038 CPA1P15085 419 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 LIG1P18858 919 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 SPINK2P20155 84 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 RPS6KB1P23443 525 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 MCM4P33991 863 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 RDXP35241 583 aaKnown RBP8.39□□□□□ -1.07
PDPN-205ENST00000487038 NAMPTP43490 491 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 PXNP49023 591 aaPredicted RBP8.39□□□□□ -1.07
PDPN-205ENST00000487038 EPHB3P54753 998 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 GRSF1Q12849 480 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDPN-205ENST00000487038 ITPRIPL2Q3MIP1 535 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 MAEAQ7L5Y9 396 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 TTC8Q8TAM2 541 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 SHKBP1Q8TBC3 707 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 BPIFB1Q8TDL5 484 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 HAS1Q92839 578 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 GCNAQ96QF7 691 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 TMEM209Q96SK2 561 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 CCDC94Q9BW85 323 aaPredicted RBP8.39□□□□□ -1.07
PDPN-205ENST00000487038 AGXT2Q9BYV1 514 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 DUSP15Q9H1R2 295 aaPredicted RBP8.39□□□□□ -1.07
PDPN-205ENST00000487038 SLC32A1Q9H598 525 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 NCOA5Q9HCD5 579 aaKnown RBP8.39□□□□□ -1.07
PDPN-205ENST00000487038 C2orf42Q9NWW7 574 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 CEP72Q9P209 647 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 PCDHA12Q9UN75 941 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 WASF3Q9UPY6 502 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 YIPF1Q9Y548 306 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 ATG2BQ96BY7 2078 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 KALRNO60229 2985 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 PLXND1Q9Y4D7 1925 aa8.39□□□□□ -1.07
PDPN-205ENST00000487038 SMIM28A0A1B0GU29 152 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 TAF4O00268 1085 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 KHNYNO15037 678 aaKnown RBP8.38□□□□□ -1.07
PDPN-205ENST00000487038 CDKL5O76039 1030 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 PSMA5P28066 241 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 MARCKSP29966 332 aaPredicted RBP8.38□□□□□ -1.07
PDPN-205ENST00000487038 PDIA3P30101 505 aaKnown RBP8.38□□□□□ -1.07
PDPN-205ENST00000487038 GBP1P32455 592 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 RPL9P32969 192 aaKnown RBP8.38□□□□□ -1.07
PDPN-205ENST00000487038 ALDH1A3P47895 512 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 MCM2P49736 904 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 EFNA5P52803 228 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 YWHAHQ04917 246 aaPredicted RBP8.38□□□□□ -1.07
PDPN-205ENST00000487038 MRPL58Q14197 206 aaKnown RBP8.38□□□□□ -1.07
PDPN-205ENST00000487038 NPY5RQ15761 445 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 CALCRLQ16602 461 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 FBXO43Q4G163 708 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 ATF7IP2Q5U623 682 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 CD300LGQ6UXG3 332 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 PIK3AP1Q6ZUJ8 805 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 ARID3BQ8IVW6 561 aaPredicted RBP8.38□□□□□ -1.07
PDPN-205ENST00000487038 PIGOQ8TEQ8 1089 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 ACDQ96AP0 544 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 ZFYVE19Q96K21 471 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 IFT74Q96LB3 600 aa8.38□□□□□ -1.07
PDPN-205ENST00000487038 HSD17B14Q9BPX1 270 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms