RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 TRIM61Q5EBN2 209 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 EEF1DP3Q658K8 133 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 TRIM68Q6AZZ1 485 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 IQCEQ6IPM2 695 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 RNF19BQ6ZMZ0 732 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 SYNE3Q6ZMZ3 975 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 GAREM2Q75VX8 874 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 PNPLA1Q8N8W4 532 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 OR2I1PQ8NGU4 316 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 RPLP0P6Q8NHW5 317 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 E2F7Q96AV8 911 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 CAMK1GQ96NX5 476 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 PPP1R10Q96QC0 940 aaKnown RBP16.79■□□□□ 0.28
U2AF1-211ENST00000486519 LXNQ9BS40 222 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 VPS54Q9P1Q0 977 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 GDAQ9Y2T3 454 aa16.79■□□□□ 0.28
U2AF1-211ENST00000486519 URB1O60287 2271 aaKnown RBP16.79■□□□□ 0.28
U2AF1-211ENST00000486519 HELZP42694 1942 aaKnown RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 DENND4CQ5VZ89 1909 aa16.78■□□□□ 0.28
U2AF1-211ENST00000486519 ATXN2Q99700 1313 aaKnown RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 ARL2P36404 184 aa16.78■□□□□ 0.28
U2AF1-211ENST00000486519 DHPSP49366 369 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 DGKEP52429 567 aa16.78■□□□□ 0.28
U2AF1-211ENST00000486519 MRPL58Q14197 206 aaKnown RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 CTTNQ14247 550 aaKnown RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 KARSQ15046 597 aaKnown RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 ITPRIPL2Q3MIP1 535 aa16.78■□□□□ 0.28
U2AF1-211ENST00000486519 TMEM130Q8N3G9 435 aa16.78■□□□□ 0.28
U2AF1-211ENST00000486519 FRMD1Q8N878 549 aa16.78■□□□□ 0.28
U2AF1-211ENST00000486519 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 YIPF1Q9Y548 306 aa16.78■□□□□ 0.28
U2AF1-211ENST00000486519 ZNF638Q14966 1978 aaKnown RBP16.78■□□□□ 0.28
U2AF1-211ENST00000486519 CYP3A7-CYP3A51PA0A087WV96 503 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 KLF18A0A0U1RQI7 1052 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 APBB3O95704 486 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 CYP3A7P24462 503 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 PPP2R5CQ13362 524 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 DMC1Q14565 340 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 MXD4Q14582 209 aaPredicted RBP16.77■□□□□ 0.28
U2AF1-211ENST00000486519 CREB3L3Q68CJ9 461 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 CCNI2Q6ZMN8 369 aaPredicted RBP16.77■□□□□ 0.28
U2AF1-211ENST00000486519 ARMCX6Q7L4S7 300 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 MARCH9Q86YJ5 346 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 C4orf19Q8IY42 314 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 ELMOD1Q8N336 334 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 RIN3Q8TB24 985 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 DYDC2Q96IM9 177 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 EBF1Q9UH73 591 aa16.77■□□□□ 0.28
U2AF1-211ENST00000486519 A0A087WWV3 80 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 TRDMT1O14717 391 aaKnown RBP16.76■□□□□ 0.27
U2AF1-211ENST00000486519 ATG13O75143 517 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 P4HBP07237 508 aaKnown RBP16.76■□□□□ 0.27
U2AF1-211ENST00000486519 GNA11P29992 359 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 CYP4A11Q02928 519 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 POU5F1BQ06416 359 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 GRSF1Q12849 480 aaKnown RBP eCLIP16.76■□□□□ 0.27
U2AF1-211ENST00000486519 TFDP1Q14186 410 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 BPIFB1Q8TDL5 484 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 GPR88Q9GZN0 384 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 SCUBE2Q9NQ36 999 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 GPRC5CQ9NQ84 441 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 GKN1Q9NS71 199 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 EVLQ9UI08 416 aaPredicted RBP16.76■□□□□ 0.27
U2AF1-211ENST00000486519 OBSL1O75147 1896 aa16.76■□□□□ 0.27
U2AF1-211ENST00000486519 H0Y626 953 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 SOAT2O75908 522 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 TRIM16O95361 564 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 OR4Q2P0C623 313 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 ARSAP15289 507 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 PTGER3P43115 390 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 GALK1P51570 392 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 CYP4F8P98187 520 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 EXOSC10Q01780 885 aaKnown RBP16.75■□□□□ 0.27
U2AF1-211ENST00000486519 CTXN3Q4LDR2 81 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 GPR158Q5T848 1215 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 SYT13Q7L8C5 426 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 TTC9BQ8N6N2 239 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 LEMD2Q8NC56 503 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 PGLYRP2Q96PD5 576 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 NFKBIZQ9BYH8 718 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 POLR3FQ9H1D9 316 aaPredicted RBP16.75■□□□□ 0.27
U2AF1-211ENST00000486519 EBF3Q9H4W6 596 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 AFF4Q9UHB7 1163 aaKnown RBP16.75■□□□□ 0.27
U2AF1-211ENST00000486519 PPME1Q9Y570 386 aa16.75■□□□□ 0.27
U2AF1-211ENST00000486519 UPK3BL1B0FP48 263 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 DPYSL4O14531 572 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 CD59P13987 128 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 TPGS2Q68CL5 300 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 EXOC8Q8IYI6 725 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 RLN3Q8WXF3 142 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 FAM83CQ9BQN1 747 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 DDX25Q9UHL0 483 aaKnown RBP16.74■□□□□ 0.27
U2AF1-211ENST00000486519 RAI2Q9Y5P3 530 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms