RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CYP39A1Q9NYL5 469 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 STRIP2Q9ULQ0 834 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 SPEF2Q9C093 1822 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CYP3A7-CYP3A51PA0A087WV96 503 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 MAPK13O15264 365 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 MAGEB2O15479 319 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CALCAP01258 141 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 GLI1P08151 1106 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CYP3A7P24462 503 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CDH6P55285 790 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 JAG1P78504 1218 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 LAMC2Q13753 1193 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 RRP1BQ14684 758 aaKnown RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 KIAA1841Q6NSI8 718 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 METTL7BQ6UX53 244 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 C1orf131Q8NDD1 294 aaKnown RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 HSD3B7Q9H2F3 369 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 PARVAQ9NVD7 372 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 IP6K2Q9UHH9 426 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 SSX2IPQ9Y2D8 614 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 DIS3Q9Y2L1 958 aaKnown RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 ZNF541Q9H0D2 1346 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 A0A087WZ62 844 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CCT8L1PA6NM43 557 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 PIK3CDO00329 1044 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 GPS1Q13098 491 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 ITGB3BPQ13352 177 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 KCTD19Q17RG1 926 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 PDZD4Q76G19 769 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 PYROXD1Q8WU10 500 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CPB2Q96IY4 423 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 FDXACB1Q9BRP7 624 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 RNF19AQ9NV58 838 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 DONSONQ9NYP3 566 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 SIK3Q9Y2K2 1263 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 RASA4BC9J798 803 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 PDHXO00330 501 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 RASA4O43374 803 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 CREB3O43889 395 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 MYBL2P10244 700 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 MUTP22033 750 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 UGCGQ16739 394 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 NAIF1Q69YI7 327 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 CATSPERGQ6ZRH7 1159 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 TRPM8Q7Z2W7 1104 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 ARHGEF19Q8IW93 802 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 PDIK1LQ8N165 341 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 TGS1Q96RS0 853 aaKnown RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 NUDCD1Q96RS6 583 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 DHX35Q9H5Z1 703 aaKnown RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 PRMT7Q9NVM4 692 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 FNDC3AQ9Y2H6 1198 aaKnown RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 IGKV6D-41A0A0C4DH26 115 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 KIAA0391O15091 583 aaKnown RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 OGTO15294 1046 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 TBC1D12O60347 775 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 NPTXRO95502 500 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 INSRRP14616 1297 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 PRLRP16471 622 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 CHRNA3P32297 505 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 NAMPTP43490 491 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 NME3Q13232 169 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 RWDD4Q6NW29 188 aaKnown RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 C1orf228Q6PIY5 440 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 EP400NLQ6ZTU2 488 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 CFAP36Q96G28 342 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 LRRC37BQ96QE4 947 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 SH3GL3Q99963 347 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 NIF3L1Q9GZT8 377 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 SLITRK6Q9H5Y7 841 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 VCX3AQ9NNX9 186 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 DBR1Q9UK59 544 aaKnown RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 CYP11B1P15538 503 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 SERPINB6P35237 376 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 AARSP49588 968 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 IRX1P78414 480 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 KRT17Q04695 432 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 TSEN2Q8NCE0 465 aaKnown RBP11.93□□□□□ -0.5
SMPD4-218ENST00000482171 BCAS3Q9H6U6 928 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 BATF3Q9NR55 127 aa11.93□□□□□ -0.5
SMPD4-218ENST00000482171 A0A0G2JND7 137 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 PABPN1LA6NDY0 278 aaKnown RBP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 P4HA2O15460 535 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 TOM1L1O75674 476 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 CPP00450 1065 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 SCTRP47872 440 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 AP3M2P53677 418 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 RBP5P82980 135 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 PDE1BQ01064 536 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 CYP24A1Q07973 514 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 PPP3CAQ08209 521 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 KCNMA1Q12791 1236 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms