RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 RNPEPQ9H4A4 650 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 UNKLQ9H9P5 680 aaKnown RBP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 METTL14Q9HCE5 456 aaKnown RBP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 GALNT9Q9HCQ5 603 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 CCDC18Q5T9S5 1454 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 NESP48681 1621 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 S100BP04271 92 aaPredicted RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 SREBF1P36956 1147 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 MMP14P50281 582 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 EVA1CP58658 441 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 SRSF4Q08170 494 aaKnown RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 CHAF1AQ13111 956 aaPredicted RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 BRDTQ58F21 947 aaPredicted RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 CC2D1BQ5T0F9 858 aaKnown RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 ARMC6Q6NXE6 501 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 ZNF529Q6P280 563 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 PQLC1Q8N2U9 271 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 CNTD1Q8N815 330 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 FUBP1Q96AE4 644 aaKnown RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 MTMR8Q96EF0 704 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 PPP1R9BQ96SB3 815 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 QRSL1Q9H0R6 528 aaKnown RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 GEMIN8Q9NWZ8 242 aaKnown RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 CHMP5Q9NZZ3 219 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 HSFX1Q9UBD0 423 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 SLC23A1Q9UHI7 598 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 MTO1Q9Y2Z2 717 aaKnown RBP4.79□□□□□ -1.64
CMSS1-204ENST00000479555 SPEF1Q9Y4P9 236 aa4.79□□□□□ -1.64
CMSS1-204ENST00000479555 SYNJ1O43426 1573 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 UQCRHLA0A096LP55 91 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 K7ESF4 209 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 UQCRHP07919 91 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 ATP5JP18859 108 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 GCSHP23434 173 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 ECHS1P30084 290 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 RALBP1Q15311 655 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 AKNAD1Q5T1N1 836 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 SYDE2Q5VT97 1194 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 ZNF788Q6ZQV5 615 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 LHFPL2Q6ZUX7 228 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 DRC7Q8IY82 874 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 FAM9BQ8IZU0 186 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 CLRN3Q8NCR9 226 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 GPR156Q8NFN8 814 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 SSH3Q8TE77 659 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 SMG7Q92540 1137 aaKnown RBP4.78□□□□□ -1.64
CMSS1-204ENST00000479555 MARS2Q96GW9 593 aaKnown RBP4.78□□□□□ -1.64
CMSS1-204ENST00000479555 TIGD1Q96MW7 591 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 ACAP3Q96P50 834 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 CHMP4AQ9BY43 222 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 REXO4Q9GZR2 422 aaKnown RBP4.78□□□□□ -1.64
CMSS1-204ENST00000479555 BCO1Q9HAY6 547 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 TMEM74BQ9NUR3 256 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 KCTD5Q9NXV2 234 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 KCNE5Q9UJ90 142 aa4.78□□□□□ -1.64
CMSS1-204ENST00000479555 RUVBL1Q9Y265 456 aaKnown RBP4.78□□□□□ -1.64
CMSS1-204ENST00000479555 POLR1AO95602 1720 aaPredicted RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 PHF2O75151 1096 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 KATNA1O75449 491 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 PRKD3O94806 890 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 POMCP01189 267 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 ENPP1P22413 925 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 ZNF81P51508 661 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 SETQ01105 290 aaPredicted RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 SP140Q13342 867 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 MTMR1Q13613 665 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 UBXN2BQ14CS0 331 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 FSCN1Q16658 493 aaKnown RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 AMOTL1Q8IY63 956 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 COG1Q8WTW3 980 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 BOD1Q96IK1 185 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 SENP6Q9GZR1 1112 aaPredicted RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 DIAPH3Q9NSV4 1193 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 RBM28Q9NW13 759 aaKnown RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 TMEM51Q9NW97 253 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 ARPP21Q9UBL0 812 aaPredicted RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 AJAP1Q9UKB5 411 aaPredicted RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 NOL7Q9UMY1 257 aaKnown RBP4.77□□□□□ -1.65
CMSS1-204ENST00000479555 ACTL7AQ9Y615 435 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 UACAQ9BZF9 1416 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 ABCC8Q09428 1581 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 KIF21AQ7Z4S6 1674 aa4.77□□□□□ -1.65
CMSS1-204ENST00000479555 WDR91A4D1P6 747 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 WIPF3A6NGB9 483 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 ERN1O75460 977 aaKnown RBP4.76□□□□□ -1.65
CMSS1-204ENST00000479555 SOGA1O94964 1423 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 TPM3P06753 285 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 PCSK1P29120 753 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 VAV2P52735 878 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 PER3P56645 1201 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 NOMO3P69849 1222 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 PPP3CAQ08209 521 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 KLF1Q13351 362 aaPredicted RBP4.76□□□□□ -1.65
CMSS1-204ENST00000479555 NOMO1Q15155 1222 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 SF3B3Q15393 1217 aaKnown RBP4.76□□□□□ -1.65
CMSS1-204ENST00000479555 SYCP1Q15431 976 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 NCOA1Q15788 1441 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 ADRM1Q16186 407 aa4.76□□□□□ -1.65
CMSS1-204ENST00000479555 PLEKHG6Q3KR16 790 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms