RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 EPC1Q9H2F5 836 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 CERS4Q9HA82 394 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 PLA2G3Q9NZ20 509 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 HECAQ9UBI9 543 aaPredicted RBP7.29□□□□□ -1.24
VPS50-212ENST00000476413 E9PLN8 166 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 INHBBP09529 407 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 PARP1P09874 1014 aaKnown RBP7.28□□□□□ -1.24
VPS50-212ENST00000476413 KCNJ5P48544 419 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 PSMC1P62191 440 aaKnown RBP7.28□□□□□ -1.24
VPS50-212ENST00000476413 SLC13A2Q13183 592 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 CTBP1Q13363 440 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 SURF1Q15526 300 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 MFSD5Q6N075 450 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 DRICH1Q6PGQ1 229 aaPredicted RBP7.28□□□□□ -1.24
VPS50-212ENST00000476413 ZNF783Q6ZMS7 281 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 FAM83AQ86UY5 434 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 KRTAP1-3Q8IUG1 177 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 ELOA2Q8IYF1 753 aaPredicted RBP7.28□□□□□ -1.24
VPS50-212ENST00000476413 TFAP2CQ92754 450 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 KLHL32Q96NJ5 620 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 OR14A2Q96R54 314 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 VKORC1Q9BQB6 163 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 VPS11Q9H270 941 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 PPP4R1LQ9P1A2 415 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 CDC23Q9UJX2 597 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 SLC30A1Q9Y6M5 507 aa7.28□□□□□ -1.24
VPS50-212ENST00000476413 CDHR4A6H8M9 788 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 ZNF785A8K8V0 405 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 F5H423 210 aaPredicted RBP7.27□□□□□ -1.25
VPS50-212ENST00000476413 AGFG2O95081 481 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 UNC5CO95185 931 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 ANXA1P04083 346 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 IL1R1P14778 569 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 PTTG1IPP53801 180 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 TCF15Q12870 199 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 FOXL1Q12952 345 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
VPS50-212ENST00000476413 C1QL3Q5VWW1 255 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 SYT12Q8IV01 421 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 ZFPM1Q8IX07 1006 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 LRRC56Q8IYG6 542 aaPredicted RBP7.27□□□□□ -1.25
VPS50-212ENST00000476413 CCDC33Q8N5R6 958 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 PCSK9Q8NBP7 692 aaKnown RBP7.27□□□□□ -1.25
VPS50-212ENST00000476413 MDGA1Q8NFP4 955 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 ZFP28Q8NHY6 868 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 ST8SIA2Q92186 375 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 SCAMP4Q969E2 229 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 CPPED1Q9BRF8 314 aaPredicted RBP7.27□□□□□ -1.25
VPS50-212ENST00000476413 SELENOOQ9BVL4 669 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 TINAGL1Q9GZM7 467 aaPredicted RBP7.27□□□□□ -1.25
VPS50-212ENST00000476413 PPCSQ9HAB8 311 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
VPS50-212ENST00000476413 MRPS18AQ9NVS2 196 aaKnown RBP7.27□□□□□ -1.25
VPS50-212ENST00000476413 A0A087WWL8 130 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 TMEM233B4DJY2 109 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 APOL1O14791 398 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 CREB3O43889 395 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 FOSP01100 380 aaPredicted RBP7.26□□□□□ -1.25
VPS50-212ENST00000476413 CNR2P34972 360 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 SLC11A2P49281 568 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 ZNF135P52742 658 aaPredicted RBP7.26□□□□□ -1.25
VPS50-212ENST00000476413 SLFN5Q08AF3 891 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 ELAVL1Q15717 326 aaKnown RBP7.26□□□□□ -1.25
VPS50-212ENST00000476413 C4orf46Q504U0 113 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 INO80DQ53TQ3 878 aaPredicted RBP7.26□□□□□ -1.25
VPS50-212ENST00000476413 METTL24Q5JXM2 366 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 METRNLQ641Q3 311 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 TCTN3Q6NUS6 607 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 PPP1R32Q7Z5V6 425 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 FUKQ8N0W3 1084 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 FEZF2Q8TBJ5 459 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 ARFGAP3Q9NP61 516 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 GJB4Q9NTQ9 266 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 PCDHGB2Q9Y5G2 931 aa7.26□□□□□ -1.25
VPS50-212ENST00000476413 DRGXA6NNA5 263 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 FOXS1O43638 330 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 TBC1D4O60343 1298 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 RAD17O75943 681 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 ITGB1P05556 798 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 THP07101 528 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 HARSP12081 509 aaKnown RBP7.25□□□□□ -1.25
VPS50-212ENST00000476413 GNAT2P19087 354 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 FGFR2P21802 821 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 FDXRP22570 491 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 MSX2P35548 267 aaPredicted RBP7.25□□□□□ -1.25
VPS50-212ENST00000476413 SLC35G1Q2M3R5 365 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 TBC1D10BQ4KMP7 808 aaPredicted RBP7.25□□□□□ -1.25
VPS50-212ENST00000476413 USP37Q86T82 979 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 FITM2Q8N6M3 262 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 ATP11CQ8NB49 1132 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 OR56A3Q8NH54 315 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 KCNC2Q96PR1 638 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 NEU1Q99519 415 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 MPHOSPH9Q99550 1183 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 KRTAP4-12Q9BQ66 201 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 SSBP3Q9BWW4 388 aaPredicted RBP7.25□□□□□ -1.25
VPS50-212ENST00000476413 ZNF518BQ9C0D4 1074 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 MYO1AQ9UBC5 1043 aa7.25□□□□□ -1.25
VPS50-212ENST00000476413 RGS17Q9UGC6 210 aaPredicted RBP7.25□□□□□ -1.25
VPS50-212ENST00000476413 PLEKHM1Q9Y4G2 1056 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms