RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 SPC24Q8NBT2 197 aa14.32□□□□□ -0.12
BRAT1-205ENST00000473879 ZSWIM2Q8NEG5 633 aa14.32□□□□□ -0.12
BRAT1-205ENST00000473879 PARD3BQ8TEW8 1205 aa14.32□□□□□ -0.12
BRAT1-205ENST00000473879 BCL7CQ8WUZ0 217 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-205ENST00000473879 PCMTD1Q96MG8 357 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-205ENST00000473879 PARP2Q9UGN5 583 aa14.32□□□□□ -0.12
BRAT1-205ENST00000473879 CPSF3Q9UKF6 684 aaKnown RBP14.32□□□□□ -0.12
BRAT1-205ENST00000473879 TCF20Q9UGU0 1960 aaKnown RBP14.32□□□□□ -0.12
BRAT1-205ENST00000473879 CITO14578 2027 aa14.32□□□□□ -0.12
BRAT1-205ENST00000473879 TRIP11Q15643 1979 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 GRXCR2A6NFK2 248 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 HIDE1A8MVS5 230 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 PER2O15055 1255 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 P4HA2O15460 535 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 TBX10O75333 385 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 IL18RAPO95256 599 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 CLTAP09496 248 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 TRIM49P0CI25 452 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 TRIM49CP0CI26 452 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 CTSAP10619 480 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 GRM5P41594 1212 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 FMO5P49326 533 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 GSDMDP57764 484 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 MYL7Q01449 175 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 DLX2Q07687 328 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-205ENST00000473879 GRIK3Q13003 919 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 SYCP1Q15431 976 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 PTCRAQ6ISU1 281 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-205ENST00000473879 VPS52Q8N1B4 723 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 CCDC127Q96BQ5 260 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 MSLNLQ96KJ4 702 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 CGRRF1Q99675 332 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 NUP58Q9BVL2 599 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 CCDC94Q9BW85 323 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-205ENST00000473879 ZBP1Q9H171 429 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 RPF1Q9H9Y2 349 aaKnown RBP14.31□□□□□ -0.12
BRAT1-205ENST00000473879 SNTG2Q9NY99 539 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 KLK14Q9P0G3 267 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 FAM50BQ9Y247 325 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 IRAK3Q9Y616 596 aa14.31□□□□□ -0.12
BRAT1-205ENST00000473879 C2orf71A6NGG8 1288 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 LRRIQ3A6PVS8 624 aaPredicted RBP14.3□□□□□ -0.12
BRAT1-205ENST00000473879 TNFRSF10AO00220 468 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 PTGESO14684 152 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 PMM2O15305 246 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 CXCL14O95715 111 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 GLP2RO95838 553 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 DLATP10515 647 aaKnown RBP14.3□□□□□ -0.12
BRAT1-205ENST00000473879 NDUFV1P49821 464 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 MXI1P50539 228 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 AP3M2P53677 418 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 KCNC3Q14003 757 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 ZBTB41Q5SVQ8 909 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 TMEM184AQ6ZMB5 413 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 GBP6Q6ZN66 633 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 PPFIBP1Q86W92 1011 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 CEP120Q8N960 986 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 RPS6KC1Q96S38 1066 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 CXCL16Q9H2A7 254 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 TMEM8AQ9HCN3 771 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 CLEC1BQ9P126 229 aa14.3□□□□□ -0.12
BRAT1-205ENST00000473879 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-205ENST00000473879 RECQL4O94761 1208 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 IL9P15248 144 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 TNNI1P19237 187 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 TRIM21P19474 475 aaKnown RBP14.29□□□□□ -0.12
BRAT1-205ENST00000473879 TNFSF9P41273 254 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 OR1G1P47890 313 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 YARSP54577 528 aaKnown RBP14.29□□□□□ -0.12
BRAT1-205ENST00000473879 DLG4P78352 724 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 CLDN10P78369 228 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 ENOX2Q16206 610 aaKnown RBP14.29□□□□□ -0.12
BRAT1-205ENST00000473879 EXOC3L4Q17RC7 722 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 SEZ6Q53EL9 994 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 FIGNQ5HY92 759 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 KRT39Q6A163 491 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 WDR49Q8IV35 697 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 CD302Q8IX05 232 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 CCDC150Q8NCX0 1101 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 PLEKHO2Q8TD55 490 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 ACAP3Q96P50 834 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 NECAB3Q96P71 396 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-205ENST00000473879 COLEC11Q9BWP8 271 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 VN1R3Q9BXE9 311 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 MMRN2Q9H8L6 949 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 PDE11AQ9HCR9 933 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 MARCH5Q9NX47 278 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 GCNT4Q9P109 453 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 SIK3Q9Y2K2 1263 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 DAAM1Q9Y4D1 1078 aa14.29□□□□□ -0.12
BRAT1-205ENST00000473879 MBTPS2O43462 519 aa14.28□□□□□ -0.12
BRAT1-205ENST00000473879 THP07101 528 aa14.28□□□□□ -0.12
BRAT1-205ENST00000473879 SRGAP2BP0DMP2 458 aa14.28□□□□□ -0.12
BRAT1-205ENST00000473879 CXCL8P10145 99 aa14.28□□□□□ -0.12
BRAT1-205ENST00000473879 GCLMP48507 274 aa14.28□□□□□ -0.12
BRAT1-205ENST00000473879 OSTNP61366 133 aa14.28□□□□□ -0.12
BRAT1-205ENST00000473879 TUSC3Q13454 348 aa14.28□□□□□ -0.12
BRAT1-205ENST00000473879 SMAD4Q13485 552 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms