RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 K7ERI5 159 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 EPN2O95208 641 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 SPATA31C1P0DKV0 1188 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 CYP11B2P19099 503 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 RNF43Q68DV7 783 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 RNF19BQ6ZMZ0 732 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 CEP120Q8N960 986 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 GAB3Q8WWW8 586 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 WASF1Q92558 559 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 PDRG1Q9NUG6 133 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 MAFFQ9ULX9 164 aa20.77■□□□□ 0.92
NCKIPSD-209ENST00000470006 STK36Q9NRP7 1315 aa20.77■□□□□ 0.91
NCKIPSD-209ENST00000470006 MED24O75448 989 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 HOXA6P31267 233 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 GRM5P41594 1212 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 EPHA5P54756 1037 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 FCHO2Q0JRZ9 810 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 MRPL58Q14197 206 aaKnown RBP20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 ZNF568Q3ZCX4 644 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 ARHGAP29Q52LW3 1261 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 WDR44Q5JSH3 913 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 ARID3BQ8IVW6 561 aaPredicted RBP20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 TCHPQ9BT92 498 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 LSM14BQ9BX40 385 aaKnown RBP20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 DAXXQ9UER7 740 aaPredicted RBP20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 ZMIZ1Q9ULJ6 1067 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 SLC8A2Q9UPR5 921 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 YIPF1Q9Y548 306 aa20.76■□□□□ 0.91
NCKIPSD-209ENST00000470006 C1QTNF9BB2RNN3 333 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 EXTL3O43909 919 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 C1QTNF9P0C862 333 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 RPL9P32969 192 aaKnown RBP20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 EPHB3P54753 998 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 PLD1Q13393 1074 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 UNQ6494/PRO21346Q6UXR6 183 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 SYNPOQ8N3V7 929 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 DDX12PQ92771 950 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 C18orf25Q96B23 403 aaPredicted RBP20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 SUSD3Q96L08 255 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 ZMAT2Q96NC0 199 aaKnown RBP20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 TBC1D32Q96NH3 1257 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 ACAP3Q96P50 834 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 PGLYRP2Q96PD5 576 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 TNFSF13BQ9Y275 285 aa20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 KIF26AQ9ULI4 1882 aaPredicted RBP20.75■□□□□ 0.91
NCKIPSD-209ENST00000470006 ATG2BQ96BY7 2078 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 CCDC169A6NNP5 214 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 CITO14578 2027 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 HARSP12081 509 aaKnown RBP20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 MPLP40238 635 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 RAP1GAPP47736 663 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 ALDH1A3P47895 512 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 NOVA1P51513 510 aaKnown RBP20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 STXBP5Q5T5C0 1151 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 ALKAL1Q6UXT8 129 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 ERMNQ8TAM6 284 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 MTMR9Q96QG7 549 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 CDT1Q9H211 546 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 ATXN3LQ9H3M9 355 aa20.74■□□□□ 0.91
NCKIPSD-209ENST00000470006 FOSBP53539 338 aa20.73■□□□□ 0.91
NCKIPSD-209ENST00000470006 FOXC1Q12948 553 aa20.73■□□□□ 0.91
NCKIPSD-209ENST00000470006 CCINQ13939 588 aa20.73■□□□□ 0.91
NCKIPSD-209ENST00000470006 XKR4Q5GH76 650 aa20.73■□□□□ 0.91
NCKIPSD-209ENST00000470006 KIFAP3Q92845 792 aa20.73■□□□□ 0.91
NCKIPSD-209ENST00000470006 POLR3CQ9BUI4 534 aaPredicted RBP20.73■□□□□ 0.91
NCKIPSD-209ENST00000470006 VPS45Q9NRW7 570 aa20.73■□□□□ 0.91
NCKIPSD-209ENST00000470006 WNT7AO00755 349 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 OR4Q2P0C623 313 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 KCNE1P15382 129 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 MCM7P33993 719 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 TNK2Q07912 1038 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 DUSP4Q13115 394 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 ARHGAP15Q53QZ3 475 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 GPR158Q5T848 1215 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 CENPQQ7L2Z9 268 aaPredicted RBP20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 TNFRSF25Q93038 417 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 ACO2Q99798 780 aaKnown RBP20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 TMEM60Q9H2L4 133 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 PCDHB8Q9UN66 801 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 PCDHGA5Q9Y5G8 931 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 LAMA1P25391 3075 aa20.72■□□□□ 0.91
NCKIPSD-209ENST00000470006 BTBD18B2RXH4 712 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 ATG13O75143 517 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 HOXB3P14651 431 aaPredicted RBP20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 YWHAHQ04917 246 aaPredicted RBP20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 PTPAQ15257 358 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 TCEAL6Q6IPX3 200 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 USP37Q86T82 979 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 TMC8Q8IU68 726 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 TCEAL3Q969E4 200 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 LRRC3BQ96PB8 259 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 TMEM209Q96SK2 561 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 EDEM2Q9BV94 578 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 MRPL4Q9BYD3 311 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 THG1LQ9NWX6 298 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 SLC27A5Q9Y2P5 690 aa20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 TIMM13Q9Y5L4 95 aaPredicted RBP20.71■□□□□ 0.91
NCKIPSD-209ENST00000470006 RPA1P27694 616 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms