RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ANO9A1A5B4 782 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 SYCE3A1L190 88 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 LRRIQ3A6PVS8 624 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 GOLGA6L19H0YKK7 550 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 RBAK-RBAKDNI3L0D1 243 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 RFXAPO00287 272 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 PES1O00541 588 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 PIRO00625 290 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 CYB561D2O14569 222 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 B4GALT3O60512 393 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 TYMPP19971 482 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 KLRC2P26717 231 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 ELF1P32519 619 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 BRCC3P46736 316 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 NDUFV1P49821 464 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 ZNF165P49910 485 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 PMS1P54277 932 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 LILRA4P59901 499 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 YWHAEP62258 255 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 CLDN10P78369 228 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 MYL7Q01449 175 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 DSG1Q02413 1049 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 NCOA4Q13772 614 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 ZACNQ401N2 412 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 ANO6Q4KMQ2 910 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 LMBRD2Q68DH5 695 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 OVOS1Q6IE37 1185 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 EP400NLQ6ZTU2 488 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 DPH6Q7L8W6 267 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 SPRED2Q7Z698 418 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 TMEM173Q86WV6 379 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 ZC3H3Q8IXZ2 948 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 TTC39CQ8N584 583 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 MRPL43Q8N983 215 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 C1orf127Q8N9H9 656 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 FBXL13Q8NEE6 735 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 OR5B17Q8NGF7 314 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 SPATA18Q8TC71 538 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 HPDLQ96IR7 371 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 SENP8Q96LD8 212 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 MMS19Q96T76 1030 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 POP1Q99575 1024 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 DUSP9Q99956 384 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 PAAF1Q9BRP4 392 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 GPR62Q9BZJ7 368 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 DNAJC25Q9H1X3 360 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 CXCL16Q9H2A7 254 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 FNIP2Q9P278 1114 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 CACNG4Q9UBN1 327 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 PCDHB8Q9UN66 801 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 STXBP5LQ9Y2K9 1186 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 NFE2L3Q9Y4A8 694 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 SNX9Q9Y5X1 595 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 IRAK3Q9Y616 596 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 MTCH2Q9Y6C9 303 aa6.86□□□□□ -1.31
SF3B1-206ENST00000462613 RANBP2P49792 3224 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 LAMA2P24043 3122 aaKnown RBP6.86□□□□□ -1.31
SF3B1-206ENST00000462613 EPOPA6NHQ4 379 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 OR6C75A6NL08 312 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 M0QZQ0 153 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 P4HA2O15460 535 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 MEFVO15553 781 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 STAU1O95793 577 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 GLUD1P00367 558 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 AFPP02771 609 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 TRIM49P0CI25 452 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 TRIM49CP0CI26 452 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 CPB1P15086 417 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 FGFR3P22607 806 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 EEF1GP26641 437 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 PCSK1P29120 753 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 TKTP29401 623 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 GCLMP48507 274 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 NRIP1P48552 1158 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 LHX1P48742 406 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 GUCY2FP51841 1108 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 MARSP56192 900 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 ERVFC1P60507 584 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 TSPY1Q01534 308 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 PTPN14Q15678 1187 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 AAK1Q2M2I8 961 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 WDR72Q3MJ13 1102 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 ZSCAN23Q3MJ62 389 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 FILIP1LQ4L180 1135 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 CTXN3Q4LDR2 81 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 LIN9Q5TKA1 542 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 TDRD10Q5VZ19 366 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 SV2AQ7L0J3 742 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 RNF168Q8IYW5 571 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 DCP1BQ8IZD4 617 aaKnown RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 TOP6BLQ8N6T0 577 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 C3orf58Q8NDZ4 430 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 MAFAQ8NHW3 353 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-206ENST00000462613 PPM1EQ8WY54 764 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 PIK3R5Q8WYR1 880 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 CASP10Q92851 521 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 FAXDC2Q96IV6 333 aa6.85□□□□□ -1.31
SF3B1-206ENST00000462613 CNOT6LQ96LI5 555 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms