RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	SAAL1	Q96ER3	474 aa		13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	KIF12	Q96FN5	646 aa		13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	ST6GALNAC4	Q9H4F1	302 aa		13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	TMEM206	Q9H813	350 aa		13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	WNT16	Q9UBV4	365 aa		13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	AGO2	Q9UKV8	859 aa	Known RBP	13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	CDY1	Q9Y6F8	540 aa		13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	ANK1	P16157	1881 aa		13.8	□□□□□ -0.2
FDPS-204	ENST00000461507	TSC2	P49815	1807 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	PROB1	E7EW31	1015 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	PODXL	O00592	558 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	NARS	O43776	548 aa	Known RBP	13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	XYLB	O75191	536 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	PIGR	P01833	764 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	CLTA	P09496	248 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	FSHR	P23945	695 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	OR1D2	P34982	312 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	ACOT2	P49753	483 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	KYAT1	Q16773	422 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	SLC10A6	Q3KNW5	377 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	KMT5B	Q4FZB7	885 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	SLC39A4	Q6P5W5	647 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	SLC44A3	Q8N4M1	653 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	SLC7A14	Q8TBB6	771 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	RSAD2	Q8WXG1	361 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	HAPLN2	Q9GZV7	340 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	MFSD1	Q9H3U5	465 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	PCIF1	Q9H4Z3	704 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	AVEN	Q9NQS1	362 aa	Predicted RBP	13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	SLC2A4RG	Q9NR83	387 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507	CDH7	Q9ULB5	785 aa		13.79	□□□□□ -0.2
FDPS-204	ENST00000461507		A0A0B4J269	797 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	PVALEF	A0A1B0GWK0	134 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	ARHGEF37	A1IGU5	675 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	GOLGA8IP	A6NC78	632 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	GOLGA8J	A6NMD2	632 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507		I3L4J1	428 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	FAM189A1	O60320	539 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	PPP1R37	O75864	691 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	ABLIM3	O94929	683 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	RPN1	P04843	607 aa	Known RBP	13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	ROR1	Q01973	937 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	MRPL58	Q14197	206 aa	Known RBP	13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	POSTN	Q15063	836 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	VARS2	Q5ST30	1063 aa	Known RBP	13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	CCDC105	Q8IYK2	499 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	SIX5	Q8N196	739 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	C18orf25	Q96B23	403 aa	Predicted RBP	13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	SUSD3	Q96L08	255 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	FAM213A	Q9BRX8	229 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	PLEKHA5	Q9HAU0	1116 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	NUB1	Q9Y5A7	615 aa		13.78	□□□□□ -0.2
FDPS-204	ENST00000461507	TTC26	A0AVF1	554 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	KRBA1	A5PL33	1030 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	LACTBL1	A8MY62	500 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	EIF3D	O15371	548 aa	Known RBP eCLIP	13.77	□□□□□ -0.21	1e-8	■□□□□ 8.3
FDPS-204	ENST00000461507	CCL16	O15467	120 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	XPOT	O43592	962 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	KIN	O60870	393 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	ADRB2	P07550	413 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	LRPAP1	P30533	357 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	FAM160A1	Q05DH4	1040 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	ZBTB6	Q15916	424 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	CNNM4	Q6P4Q7	775 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	ZNF461	Q8TAF7	563 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	FGF13	Q92913	245 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	IPO9	Q96P70	1041 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	RTP3	Q9BQQ7	232 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	CBWD1	Q9BRT8	395 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	TUBGCP4	Q9UGJ1	667 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	HOOK1	Q9UJC3	728 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	FBXL21	Q9UKT6	434 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	NUMBL	Q9Y6R0	609 aa		13.77	□□□□□ -0.21
FDPS-204	ENST00000461507	FAM186A	A6NE01	2351 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	MIA3	Q5JRA6	1907 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	UBE4B	O95155	1302 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	FAM237A	A0A1B0GTK4	181 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	WDR27	A2RRH5	827 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	CLIC2	O15247	247 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	GADD45B	O75293	160 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	CLSTN1	O94985	981 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	MYL1	P05976	194 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	CYP3A5	P20815	502 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	NBL1	P41271	181 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	AARS	P49588	968 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	CYP2J2	P51589	502 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	NTHL1	P78549	312 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	PNOC	Q13519	176 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	TMEM132D	Q14C87	1099 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	ENOX2	Q16206	610 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	PHLDB3	Q6NSJ2	640 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	HS2ST1	Q7LGA3	356 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	NPAS3	Q8IXF0	933 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	TCEAL8	Q8IYN2	117 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	FLCN	Q8NFG4	579 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	FGF14	Q92915	247 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	TSPAN18	Q96SJ8	248 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms