RNA–Protein interactions for RNA: ENST00000461405.1

PHF20-208, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-208ENST00000461405 KRT19P08727 400 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 KRT13P13646 458 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 AP3M2P53677 418 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 ELAVL2Q12926 359 aaKnown RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 CBWD6Q4V339 395 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 CT47A1Q5JQC4 288 aaPredicted RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 CBWD3Q5JTY5 395 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 CBWD5Q5RIA9 395 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 RSPO2Q6UXX9 243 aaPredicted RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 MRPL43Q8N983 215 aaKnown RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 VN1R2Q8NFZ6 395 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 LNX1Q8TBB1 728 aaPredicted RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 SENP8Q96LD8 212 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 MMRN2Q9H8L6 949 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 RXFP1Q9HBX9 757 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 TMEM8AQ9HCN3 771 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 NGRNQ9NPE2 291 aaKnown RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 MTRRQ9UBK8 725 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 STK39Q9UEW8 545 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
PHF20-208ENST00000461405 PCDHB8Q9UN66 801 aa13.06□□□□□ -0.32
PHF20-208ENST00000461405 KPNA7A9QM74 516 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 SYN3O14994 580 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 ADAM12O43184 909 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 TBC1D4O60343 1298 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 STAU1O95793 577 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 GLP2RO95838 553 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 CNPP09543 421 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 PNPLA4P41247 253 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 MXI1P50539 228 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 MYL6P60660 151 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 RBP5P82980 135 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 RBM10P98175 930 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 BIRC3Q13489 604 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 NCAPHQ15003 741 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 PSMD5Q16401 504 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 DUSP6Q16828 381 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 SV2CQ496J9 727 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 CDKAL1Q5VV42 579 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 PDE12Q6L8Q7 609 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 LIMS2Q7Z4I7 341 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 GPR65Q8IYL9 337 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 TAS1R2Q8TE23 839 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 KLHL5Q96PQ7 755 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 RTP3Q9BQQ7 232 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 HSD3B7Q9H2F3 369 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 SAMSN1Q9NSI8 373 aaKnown RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 L1RE1Q9UN81 338 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 STXBP5LQ9Y2K9 1186 aa13.05□□□□□ -0.32
PHF20-208ENST00000461405 TIMM13Q9Y5L4 95 aaPredicted RBP13.05□□□□□ -0.32
PHF20-208ENST00000461405 MYO7AQ13402 2215 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 PER2O15055 1255 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 TEX28O15482 410 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 LINC01565O15544 149 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 TRAPPC3O43617 180 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 CLASP2O75122 1294 aaKnown RBP13.04□□□□□ -0.32
PHF20-208ENST00000461405 CXCL14O95715 111 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 HLA-DRAP01903 254 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 CYP11A1P05108 521 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 RPL17P18621 184 aaKnown RBP13.04□□□□□ -0.32
PHF20-208ENST00000461405 TYMPP19971 482 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 PAX3P23760 479 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 GTF2H1P32780 548 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 NRIP1P48552 1158 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 NCOA4Q13772 614 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 KCNC3Q14003 757 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 HSP90AA4PQ58FG1 418 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 TCERG1LQ5VWI1 586 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 DSTYKQ6XUX3 929 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 USP37Q86T82 979 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 RBM23Q86U06 439 aaKnown RBP13.04□□□□□ -0.32
PHF20-208ENST00000461405 OSTM1Q86WC4 334 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 MICAL1Q8TDZ2 1067 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 SEMA4DQ92854 862 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 HPDLQ96IR7 371 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 THAP9Q9H5L6 903 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 VRTNQ9H8Y1 702 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 APOBEC3GQ9HC16 384 aaKnown RBP13.04□□□□□ -0.32
PHF20-208ENST00000461405 MRPL17Q9NRX2 175 aaKnown RBP13.04□□□□□ -0.32
PHF20-208ENST00000461405 GDAP2Q9NXN4 497 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
PHF20-208ENST00000461405 REV3LO60673 3130 aa13.03□□□□□ -0.32
PHF20-208ENST00000461405 CYB561D2O14569 222 aa13.03□□□□□ -0.32
PHF20-208ENST00000461405 LETM1O95202 739 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms