RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TBXAS1P24557 533 aaPredicted RBP22.63■■□□□ 1.21
VPS13B-204ENST00000441350 HNRNPH3P31942 346 aaKnown RBP22.63■■□□□ 1.21
VPS13B-204ENST00000441350 ASPAP45381 313 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 CLCNKBP51801 687 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 ARHGAP44Q17R89 818 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 SHC3Q92529 594 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 SYN2Q92777 582 aaPredicted RBP22.63■■□□□ 1.21
VPS13B-204ENST00000441350 DDX27Q96GQ7 796 aaKnown RBP22.63■■□□□ 1.21
VPS13B-204ENST00000441350 ZNF560Q96MR9 790 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 UROC1Q96N76 676 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 SPAG5Q96R06 1193 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 LBHD1Q9BQE6 289 aaPredicted RBP22.63■■□□□ 1.21
VPS13B-204ENST00000441350 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.63■■□□□ 1.21
VPS13B-204ENST00000441350 PAAF1Q9BRP4 392 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 PTPRSQ13332 1948 aa22.62■■□□□ 1.21
VPS13B-204ENST00000441350 PODXLO00592 558 aa22.62■■□□□ 1.21
VPS13B-204ENST00000441350 LILRA4P59901 499 aa22.62■■□□□ 1.21
VPS13B-204ENST00000441350 E4F1Q66K89 784 aaPredicted RBP22.62■■□□□ 1.21
VPS13B-204ENST00000441350 LRRC8AQ8IWT6 810 aa22.62■■□□□ 1.21
VPS13B-204ENST00000441350 COLGALT2Q8IYK4 626 aa22.62■■□□□ 1.21
VPS13B-204ENST00000441350 MRPL9Q9BYD2 267 aaKnown RBP22.62■■□□□ 1.21
VPS13B-204ENST00000441350 BCO2Q9BYV7 579 aa22.62■■□□□ 1.21
VPS13B-204ENST00000441350 NXF1Q9UBU9 619 aaKnown RBP22.62■■□□□ 1.21
VPS13B-204ENST00000441350 POLIQ9UNA4 740 aa22.62■■□□□ 1.21
VPS13B-204ENST00000441350 TBKBP1A7MCY6 615 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 FOXN3O00409 490 aaPredicted RBP22.61■■□□□ 1.21
VPS13B-204ENST00000441350 SPTLC1O15269 473 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 CLSTN1O94985 981 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 IGFBP6P24592 240 aaPredicted RBP22.61■■□□□ 1.21
VPS13B-204ENST00000441350 KCNJ6P48051 423 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 TAF6P49848 677 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 RNASELQ05823 741 aaKnown RBP22.61■■□□□ 1.21
VPS13B-204ENST00000441350 UBR7Q8N806 425 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 HERVK_113Q902F9 699 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 RC3H2Q9HBD1 1191 aaKnown RBP22.61■■□□□ 1.21
VPS13B-204ENST00000441350 GDAP2Q9NXN4 497 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 AIPL1Q9NZN9 384 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 NR2E3Q9Y5X4 410 aa22.61■■□□□ 1.21
VPS13B-204ENST00000441350 P4HA1P13674 534 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 ACO1P21399 889 aaKnown RBP22.6■■□□□ 1.21
VPS13B-204ENST00000441350 FECHP22830 423 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 SOX5P35711 763 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 SV2CQ496J9 727 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 SMYD5Q6GMV2 418 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 WDR59Q6PJI9 974 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 C3orf58Q8NDZ4 430 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 ZNF689Q96CS4 500 aaPredicted RBP22.6■■□□□ 1.21
VPS13B-204ENST00000441350 KPNA7A9QM74 516 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 PNMA6AP0CW24 399 aaPredicted RBP22.6■■□□□ 1.21
VPS13B-204ENST00000441350 STAT1P42224 750 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 MEA1Q16626 185 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 SFMBT2Q5VUG0 894 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 CD300LGQ6UXG3 332 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 TMCO2Q7Z6W1 182 aaPredicted RBP22.6■■□□□ 1.21
VPS13B-204ENST00000441350 FAM71AQ8IYT1 594 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 RABGGTAQ92696 567 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 FAM193BQ96PV7 902 aaPredicted RBP22.6■■□□□ 1.21
VPS13B-204ENST00000441350 NRDE2Q9H7Z3 1164 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 CYP3A43Q9HB55 503 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 CXXC1Q9P0U4 656 aaPredicted RBP22.6■■□□□ 1.21
VPS13B-204ENST00000441350 CNTN6Q9UQ52 1028 aa22.6■■□□□ 1.21
VPS13B-204ENST00000441350 AARSP49588 968 aaKnown RBP eCLIP22.59■■□□□ 1.21
VPS13B-204ENST00000441350 TNNC1P63316 161 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 TSR1Q2NL82 804 aaKnown RBP22.59■■□□□ 1.21
VPS13B-204ENST00000441350 DCLRE1AQ6PJP8 1040 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 LIMS2Q7Z4I7 341 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 TMEM139Q8IV31 216 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 LRRC43Q8N309 656 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 SDCBP2Q9H190 292 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 DNAJB4Q9UDY4 337 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 SNX9Q9Y5X1 595 aa22.59■■□□□ 1.21
VPS13B-204ENST00000441350 ZBBXA8MT70 800 aa22.58■■□□□ 1.21
VPS13B-204ENST00000441350 WEE2P0C1S8 567 aa22.58■■□□□ 1.21
VPS13B-204ENST00000441350 PAX3P23760 479 aa22.58■■□□□ 1.21
VPS13B-204ENST00000441350 SCARA5Q6ZMJ2 495 aa22.58■■□□□ 1.21
VPS13B-204ENST00000441350 IRF2BP2Q7Z5L9 587 aa22.58■■□□□ 1.21
VPS13B-204ENST00000441350 FAM124BQ9H5Z6 455 aaPredicted RBP22.58■■□□□ 1.21
VPS13B-204ENST00000441350 SMYD3Q9H7B4 428 aa22.58■■□□□ 1.21
VPS13B-204ENST00000441350 B3GAT3O94766 335 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 GFPT2O94808 682 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 CDK17Q00537 523 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 PAN2Q504Q3 1202 aaKnown RBP22.57■■□□□ 1.2
VPS13B-204ENST00000441350 FMNL3Q8IVF7 1028 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 KCNF1Q9H3M0 494 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 CISHQ9NSE2 258 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 ZNHIT6Q9NWK9 470 aaKnown RBP22.57■■□□□ 1.2
VPS13B-204ENST00000441350 HCSTQ9UBK5 93 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 TMEM189-UBE2V1I3L0A0 370 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 FERP16591 822 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 RAP1GAPP47736 663 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 CDH8P55286 799 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 ASIC2Q16515 512 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 SOWAHAQ2M3V2 549 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 RASIP1Q5U651 963 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 HGSNATQ68CP4 663 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 FAM117BQ6P1L5 589 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 MMS19Q96T76 1030 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 BAG1Q99933 345 aaPredicted RBP22.57■■□□□ 1.2
VPS13B-204ENST00000441350 TMEM175Q9BSA9 504 aa22.57■■□□□ 1.2
VPS13B-204ENST00000441350 KIF4AO95239 1232 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms