RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 LRRIQ4A6NIV6 560 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 CCDC169A6NNP5 214 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 C9orf172C9J069 976 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 H0YCG3 227 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 KIAA0355O15063 1070 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 CCP110O43303 1012 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 NDUFB5O43674 189 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 MBD3O95983 291 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 LDHAP00338 332 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 TIMP1P01033 207 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 MYL1P05976 194 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 SRGAP2CP0DJJ0 459 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 SYN1P17600 705 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 GAP43P17677 238 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 CDC25BP30305 580 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 MCM4P33991 863 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 RFC2P35250 354 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 NAMPTP43490 491 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 TRPC1P48995 793 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 CRYBB1P53674 252 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 CCL23P55773 120 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 PEX3P56589 373 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 NLRP11P59045 1033 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 NCBP1Q09161 790 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 RAD51AP2Q09MP3 1159 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 WASHC5Q12768 1159 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 DMP1Q13316 513 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 PPIGQ13427 754 aaKnown RBP eCLIP6.74□□□□□ -1.338e-6■■■■□ 22.7
ECHDC1-208ENST00000436638 E2F5Q15329 346 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 ZNF618Q5T7W0 954 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 STXBP4Q6ZWJ1 553 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 KRT77Q7Z794 578 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 ZNF410Q86VK4 478 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 RPUSD2Q8IZ73 545 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 KIAA0319LQ8IZA0 1049 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 GJD3Q8N144 294 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 MYCT1Q8N699 235 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 RNF149Q8NC42 400 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 PRPF31Q8WWY3 499 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 PPM1EQ8WY54 764 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 STAMQ92783 540 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 PAGE5Q96GU1 130 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 TIGD1Q96MW7 591 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 CEP89Q96ST8 783 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 NOC4LQ9BVI4 516 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 C2orf40Q9H1Z8 148 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 CHRDQ9H2X0 955 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 C17orf75Q9HAS0 396 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 GPRC5CQ9NQ84 441 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 KMT5AQ9NQR1 393 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 XPNPEP1Q9NQW7 623 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 PANK4Q9NVE7 773 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 KBTBD4Q9NVX7 518 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 DDX56Q9NY93 547 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 ACAD8Q9UKU7 415 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 TBX21Q9UL17 535 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 PHLPP2Q6ZVD8 1323 aa6.74□□□□□ -1.33
ECHDC1-208ENST00000436638 A0A087WZ62 844 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 NPHP3-ACAD11A0A0J9YXS1 232 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 TRIM43BA6NCK2 446 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 MYMKA6NI61 221 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 TRIM64CA6NLI5 447 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 INO80B-WBP1J3KQ70 363 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 EREGO14944 169 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 GPR182O15218 404 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 RPS6KA5O75582 802 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 ERLIN2O94905 339 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 SMC2O95347 1197 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 IQCF3P0C7M6 154 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 ACTN1P12814 892 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 PLS3P13797 630 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 ACPPP15309 386 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 SFPQP23246 707 aaKnown RBP eCLIP6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 GLRA2P23416 452 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 CYP2C18P33260 490 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 ARL2P36404 184 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 CLK1P49759 484 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 GPC3P51654 580 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 RBL2Q08999 1139 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 LAMTOR4Q0VGL1 99 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 STRN3Q13033 797 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 DRP2Q13474 957 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 GIT2Q14161 759 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 BMS1Q14692 1282 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 POSTNQ15063 836 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 ENOX2Q16206 610 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 KIZQ2M2Z5 673 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 TRIM71Q2Q1W2 868 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 MAP9Q49MG5 647 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 HERC4Q5GLZ8 1057 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 MFSD4BQ5TF39 518 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 MFSD5Q6N075 450 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 C16orf87Q6PH81 154 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 SRGAP1Q7Z6B7 1085 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 IQCF2Q8IXL9 164 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 FAM178BQ8IXR5 827 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 LINC01465Q8N7H1 131 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 USP38Q8NB14 1042 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 SLC17A8Q8NDX2 589 aa6.73□□□□□ -1.33
ECHDC1-208ENST00000436638 ASAP3Q8TDY4 903 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms