RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TFAMQ00059 246 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 MAPK6Q16659 721 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 ARMCX2Q7L311 632 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 TXLNGYQ9BZA5 131 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 RAB17Q9H0T7 212 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 AVENQ9NQS1 362 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 KLHL11Q9NVR0 708 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 CNTN6Q9UQ52 1028 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 PLXNB2O15031 1838 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 DCDC2CA8MYV0 355 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 PPP1R12AO14974 1030 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 WEE2P0C1S8 567 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 CHRNA3P32297 505 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 GJC1P36383 396 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 IRAK1P51617 712 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 EFNA5P52803 228 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 MCL1Q07820 350 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ZNF568Q3ZCX4 644 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 PLPPR4Q7Z2D5 763 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ZNF677Q86XU0 584 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 WDR49Q8IV35 697 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■■■■■ 50.8
SCAMP4-202ENST00000409472 ZNF408Q9H9D4 720 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 CHST7Q9NS84 486 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ADAM22Q9P0K1 906 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 OGTO15294 1046 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 CXCL8P10145 99 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 PROZP22891 400 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 GNGT1P63211 74 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ARHGAP1Q07960 439 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 MAMLD1Q13495 774 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 SNX1Q13596 522 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 DHX34Q14147 1143 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 EFCAB12Q6NXP0 572 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ZBTB8OSQ8IWT0 167 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 MORC4Q8TE76 937 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 LRRC45Q96CN5 670 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 DDX27Q96GQ7 796 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ATP6V1G3Q96LB4 118 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 PTPRHQ9HD43 1115 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 PCYOX1Q9UHG3 505 aa16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 R3HDM2Q9Y2K5 976 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-202ENST00000409472 ANKRD65E5RJM6 399 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 C22orf31O95567 290 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 SHBGP04278 402 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 OSBPP22059 807 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 HNRNPH1P31943 449 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 COILP38432 576 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 RAP1GAPP47736 663 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 RPL7AP62424 266 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 MBTD1Q05BQ5 628 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 MXD4Q14582 209 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 CYP1B1Q16678 543 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 ATF7IP2Q5U623 682 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 GIMAP7Q8NHV1 300 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 ZNF606Q8WXB4 792 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 TFAP2BQ92481 460 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 CAPS2Q9BXY5 557 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 TMBIM4Q9HC24 238 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.15■□□□□ 0.183e-6■■■■□ 24.5
SCAMP4-202ENST00000409472 POLIQ9UNA4 740 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 CCDC189A1A4V9 331 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 FAM187AA6NFU0 413 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 GUCY1A3Q02108 690 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 ORC1Q13415 861 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 FAM81BQ96LP2 452 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 HEMGNQ9BXL5 484 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 XYLT2Q9H1B5 865 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 CISHQ9NSE2 258 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 USTQ9Y2C2 406 aa16.15■□□□□ 0.18
SCAMP4-202ENST00000409472 PPFIA2O75334 1257 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 HPDP32754 393 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 ASPAP45381 313 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 BPIFB4P59827 614 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 ZNF252P-AS1Q0IIN9 211 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 MPZL3Q6UWV2 235 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 USP50Q70EL3 339 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 CCDC105Q8IYK2 499 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 PPP1R13LQ8WUF5 828 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 L3MBTL3Q96JM7 780 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 CDT1Q9H211 546 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 FZD8Q9H461 694 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 KIF3CO14782 793 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 TP73O15350 636 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 ECM2O94769 699 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 PROSCO94903 275 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 NFICP08651 508 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 HSPA6P17066 643 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 NR1D1P20393 614 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 NBPF20Q3BBV1 942 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
SCAMP4-202ENST00000409472 TSHZ1Q6ZSZ6 1077 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms