RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MTMR9Q96QG7 549 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 CCDC94Q9BW85 323 aaPredicted RBP18.28■□□□□ 0.52
CHMP3-203ENST00000409225 TUFT1Q9NNX1 390 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 YIPF1Q9Y548 306 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 CEP295Q9C0D2 2601 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 FRYQ5TBA9 3013 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 EXTL3O43909 919 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 RPP40O75818 363 aaKnown RBP18.27■□□□□ 0.52
CHMP3-203ENST00000409225 HOXA6P31267 233 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 MCM4P33991 863 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 GRM5P41594 1212 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 EFNA5P52803 228 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 XKR4Q5GH76 650 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 STXBP5Q5T5C0 1151 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 GAB3Q8WWW8 586 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 C18orf25Q96B23 403 aaPredicted RBP18.27■□□□□ 0.52
CHMP3-203ENST00000409225 LOXL4Q96JB6 756 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 SUSD3Q96L08 255 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 IFT74Q96LB3 600 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 CDT1Q9H211 546 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 GTSE1Q9NYZ3 720 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 ORC3Q9UBD5 711 aaPredicted RBP18.27■□□□□ 0.52
CHMP3-203ENST00000409225 TNFSF13BQ9Y275 285 aa18.27■□□□□ 0.52
CHMP3-203ENST00000409225 C1QTNF9BB2RNN3 333 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 DPYSL4O14531 572 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 C1QTNF9P0C862 333 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 CCDC192P0DO97 292 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 RAP1GAPP47736 663 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 CCINQ13939 588 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 ZNF568Q3ZCX4 644 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 PSAPL1Q6NUJ1 521 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 TMC8Q8IU68 726 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 ARID3BQ8IVW6 561 aaPredicted RBP18.26■□□□□ 0.51
CHMP3-203ENST00000409225 APPL2Q8NEU8 664 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 DDX12PQ92771 950 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 LRRC3BQ96PB8 259 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 LSM14BQ9BX40 385 aaKnown RBP18.26■□□□□ 0.51
CHMP3-203ENST00000409225 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 MAFFQ9ULX9 164 aa18.26■□□□□ 0.51
CHMP3-203ENST00000409225 K7ERI5 159 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 HOXB3P14651 431 aaPredicted RBP18.25■□□□□ 0.51
CHMP3-203ENST00000409225 RPL9P32969 192 aaKnown RBP18.25■□□□□ 0.51
CHMP3-203ENST00000409225 PKN3Q6P5Z2 889 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 HAUS6Q7Z4H7 955 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 SYNPOQ8N3V7 929 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 WASF1Q92558 559 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 TBC1D32Q96NH3 1257 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 PGLYRP2Q96PD5 576 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 POLR3CQ9BUI4 534 aaPredicted RBP18.25■□□□□ 0.51
CHMP3-203ENST00000409225 LRRC3Q9BY71 257 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 ZMIZ1Q9ULJ6 1067 aa18.25■□□□□ 0.51
CHMP3-203ENST00000409225 CTDNEP1O95476 244 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 VNN2O95498 520 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 OR4Q2P0C623 313 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 KCNE1P15382 129 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 FOSBP53539 338 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 TNK2Q07912 1038 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 ARHGAP29Q52LW3 1261 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 PLA2G2CQ5R387 149 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 RNF43Q68DV7 783 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 TCEAL6Q6IPX3 200 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 UNQ6494/PRO21346Q6UXR6 183 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 CENPQQ7L2Z9 268 aaPredicted RBP18.24■□□□□ 0.51
CHMP3-203ENST00000409225 TCEAL3Q969E4 200 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 ACO2Q99798 780 aaKnown RBP18.24■□□□□ 0.51
CHMP3-203ENST00000409225 TM6SF1Q9BZW5 370 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 DNAJC25Q9H1X3 360 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
CHMP3-203ENST00000409225 PCDHB8Q9UN66 801 aa18.24■□□□□ 0.51
CHMP3-203ENST00000409225 SPAG17Q6Q759 2223 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 BTBD18B2RXH4 712 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 PFKFB2O60825 505 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 HARSP12081 509 aaKnown RBP18.23■□□□□ 0.51
CHMP3-203ENST00000409225 MARCKSP29966 332 aaPredicted RBP18.23■□□□□ 0.51
CHMP3-203ENST00000409225 MPLP40238 635 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 EPHB3P54753 998 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 PLD1Q13393 1074 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 ACAP3Q96P50 834 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 CRISPLD1Q9H336 500 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 CNTN3Q9P232 1028 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 SLC8A2Q9UPR5 921 aa18.23■□□□□ 0.51
CHMP3-203ENST00000409225 TIMM13Q9Y5L4 95 aaPredicted RBP18.23■□□□□ 0.51
CHMP3-203ENST00000409225 CCDC169A6NNP5 214 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 FDPSP14324 419 aaKnown RBP18.22■□□□□ 0.51
CHMP3-203ENST00000409225 MCM7P33993 719 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 NOVA1P51513 510 aaKnown RBP18.22■□□□□ 0.51
CHMP3-203ENST00000409225 DUSP4Q13115 394 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 GPR158Q5T848 1215 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 GAREM2Q75VX8 874 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 TMEM130Q8N3G9 435 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 BEST2Q8NFU1 509 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 ERMNQ8TAM6 284 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 KIFAP3Q92845 792 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 MKNK1Q9BUB5 465 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 TARS2Q9BW92 718 aaKnown RBP18.22■□□□□ 0.51
CHMP3-203ENST00000409225 ATXN3LQ9H3M9 355 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 PTPRHQ9HD43 1115 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 VPS45Q9NRW7 570 aa18.22■□□□□ 0.51
CHMP3-203ENST00000409225 TPCN1Q9ULQ1 816 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms