RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 RSRC1Q96IZ7 334 aaKnown RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 MTFR1LQ9H019 292 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 DMAC2Q9NW81 257 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 AGAP1Q9UPQ3 857 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PSTPIP1O43586 416 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 SDC4P31431 198 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 JAG1P78504 1218 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 RRP1BQ14684 758 aaKnown RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 P3H1Q32P28 736 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CFAP157Q5JU67 520 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 HP1BP3Q5SSJ5 553 aaPredicted RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 EFCAB12Q6NXP0 572 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 METTL7BQ6UX53 244 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CCDC60Q8IWA6 550 aaPredicted RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 ANKRD13AQ8IZ07 590 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ZBED8Q8IZ13 594 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 IQCKQ8N0W5 287 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 NME8Q8N427 588 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 MTMR14Q8NCE2 650 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 RAB3IPQ96QF0 476 aaPredicted RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 FAM118BQ9BPY3 351 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 AP5M1Q9H0R1 490 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 SPC25Q9HBM1 224 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ACP6Q9NPH0 428 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 PRMT7Q9NVM4 692 aaPredicted RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 USP20Q9Y2K6 914 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 PPP2R3BQ9Y5P8 575 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 UBR2Q8IWV8 1755 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 TIAM2Q8IVF5 1701 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 SYNJ2BP-COX16A0A087WUM0 186 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 NKRFO15226 690 aaKnown RBP eCLIP6.93□□□□□ -1.3
BDNF-203ENST00000395978 IL18RAPO95256 599 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CPP00450 1065 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 SLC8A1P32418 973 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 RBP5P82980 135 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 MKRN3Q13064 507 aaKnown RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 GRM1Q13255 1194 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 UGCGQ16739 394 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 FAM47CQ5HY64 1035 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ANO5Q75V66 913 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 C1orf131Q8NDD1 294 aaKnown RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 MYCBPAPQ8TBZ2 947 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ELMO3Q96BJ8 720 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ACAP3Q96P50 834 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 BCAS3Q9H6U6 928 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 LRRC4Q9HBW1 653 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 AVENQ9NQS1 362 aaPredicted RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 CYP39A1Q9NYL5 469 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ERAP1Q9NZ08 941 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 COX16Q9P0S2 106 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 COL20A1Q9P218 1284 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 RARAP10276 462 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 NCKAP1LP55160 1127 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CDH6P55285 790 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 BCAR1P56945 870 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 JAM2P57087 298 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 NLRP11P59045 1033 aaKnown RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 SKOR1P84550 965 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CNTN2Q02246 1040 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ZNF844Q08AG5 666 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 FAM47EQ6ZV65 393 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CDR2LQ86X02 465 aaPredicted RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 ATP11CQ8NB49 1132 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 RNF169Q8NCN4 708 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 BEST2Q8NFU1 509 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 MDM1Q8TC05 714 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CDKL2Q92772 493 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 STMN2Q93045 179 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 FAF2Q96CS3 445 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 KIF12Q96FN5 646 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 VCPIP1Q96JH7 1222 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CAMKK2Q96RR4 588 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 MTMR12Q9C0I1 747 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 SEMA4AQ9H3S1 761 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 WHRNQ9P202 907 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 NEU2Q9Y3R4 380 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 HEY1Q9Y5J3 304 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 IQANK1A0A1B0GTG1 560 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ADCY3O60266 1144 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CAND2O75155 1236 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CCNE2O96020 404 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 MAGEA4P43358 317 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 DRP2Q13474 957 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 DGKZQ13574 1117 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 HIF1AQ16665 826 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 KLHL38Q2WGJ6 581 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ZPBP2Q6X784 338 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CATSPERGQ6ZRH7 1159 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ARMCX2Q7L311 632 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ERO1BQ86YB8 467 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CD302Q8IX05 232 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ARHGAP24Q8N264 748 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 LRRC57Q8N9N7 239 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 CLEC4DQ8WXI8 215 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 SEC16BQ96JE7 1060 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ZBTB45Q96K62 511 aaPredicted RBP6.93□□□□□ -1.3
BDNF-203ENST00000395978 RILPQ96NA2 401 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 SPATC1LQ9H0A9 340 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 KLC2Q9H0B6 622 aa6.93□□□□□ -1.3
BDNF-203ENST00000395978 ST6GALNAC4Q9H4F1 302 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms