RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 C10orf88Q9H8K7 445 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 BCORL1Q5H9F3 1711 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 GOLGA8TH3BQL2 631 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 VCAM1P19320 739 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 SSTR3P32745 418 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 TTLL4Q14679 1199 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 FRMD8Q9BZ67 464 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 RAB6BQ9NRW1 208 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 COPG1Q9Y678 874 aaKnown RBP17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 H2AFYO75367 372 aaKnown RBP17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 KRT75O95678 551 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 USP10Q14694 798 aaKnown RBP17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 MCEEQ96PE7 176 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 SCN3BQ9NY72 215 aa17.93■□□□□ 0.46
SNAPC3-202ENST00000380821 AIM2O14862 343 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 NUP93Q8N1F7 819 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 TEKT4Q8WW24 435 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 CASKIN2Q8WXE0 1202 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 ERGIC2Q96RQ1 377 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 CD248Q9HCU0 757 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 MARCOQ9UEW3 520 aaPredicted RBP17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 O00370 1275 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 TLR2O60603 784 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 APRTP07741 180 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 BTBD8Q5XKL5 378 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 TWF2Q6IBS0 349 aaKnown RBP17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 GALNT4Q8N4A0 578 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 AFG1LQ8WV93 481 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 HPS3Q969F9 1004 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 EFL1Q7Z2Z2 1120 aaKnown RBP17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 ELMOD1Q8N336 334 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 TERB1Q8NA31 727 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 ANKS1AQ92625 1134 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 KIF12Q96FN5 646 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 VPS33BQ9H267 617 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 ZNF556Q9HAH1 456 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 COL15A1P39059 1388 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 QRICH2Q9H0J4 1663 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 F5H6K3 240 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 KLRC3Q07444 240 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 C3orf62Q6ZUJ4 267 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 FAM162AQ96A26 154 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 FRMD8P1Q9BZ68 369 aaPredicted RBP17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 TMBIM4Q9HC24 238 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 PPP1R3GB7ZBB8 358 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 MKNK1Q9BUB5 465 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 RSAD1Q9HA92 442 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 CHMP2BQ9UQN3 213 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 TSC22D4Q9Y3Q8 395 aa17.92■□□□□ 0.46
SNAPC3-202ENST00000380821 MYMKA6NI61 221 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 COPAP53621 1224 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 SMAD1Q15797 465 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 ANO4Q32M45 955 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 LRRC34Q8IZ02 419 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 PTPRN2Q92932 1015 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 ASIC4Q96FT7 647 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 FAM95CA0A1B0GW59 222 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 TRPC5OSA6NMA1 111 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 RPS6KA4O75676 772 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 RALAP11233 206 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 SERPINB1P30740 379 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 C12orf60Q5U649 245 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 MPP6Q9NZW5 540 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 TNPO2O14787 897 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 CTCFP49711 727 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 CHI3L2Q15782 390 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 CDR2LQ86X02 465 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 RBBP8NLQ8NC74 664 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 DNAJC7Q99615 494 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 FUT8Q9BYC5 575 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 M0R3G1 203 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 PRLRP16471 622 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 SGSM1Q2NKQ1 1148 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 RABL6Q3YEC7 729 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 KLHDC7AQ5VTJ3 777 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 B4GALNT2Q8NHY0 566 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 CALML6Q8TD86 181 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 ZNF512BQ96KM6 892 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 PNKPQ96T60 521 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 PRPF18Q99633 342 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 CELF4Q9BZC1 486 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 AFF4Q9UHB7 1163 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-202ENST00000380821 PRPF4O43172 522 aaKnown RBP eCLIP17.9■□□□□ 0.463e-6■□□□□ 10.6
SNAPC3-202ENST00000380821 POLBP06746 335 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 H2AFXP16104 143 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 SLC29A2Q14542 456 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 ANKS3Q6ZW76 656 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 ATG9AQ7Z3C6 839 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 PRKCBP05771 671 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 MYBP10242 640 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 MED15Q96RN5 788 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 ACAD9Q9H845 621 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 PLOD1Q02809 727 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 RUNX1T1Q06455 604 aa17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 SNRNP35Q16560 246 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-202ENST00000380821 SBK1Q52WX2 424 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms