RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CAPN6Q9Y6Q1 641 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 ZNF646O15015 1829 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 M0QYV0 167 aa8.83□□□□□ -1
VPS36-201ENST00000378060 COILP38432 576 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 GRM1Q13255 1194 aa8.83□□□□□ -1
VPS36-201ENST00000378060 TMED1Q13445 227 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ITIH4Q14624 930 aa8.83□□□□□ -1
VPS36-201ENST00000378060 STILQ15468 1287 aa8.83□□□□□ -1
VPS36-201ENST00000378060 HP1BP3Q5SSJ5 553 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
VPS36-201ENST00000378060 MOXD1Q6UVY6 613 aa8.83□□□□□ -1
VPS36-201ENST00000378060 SLC13A5Q86YT5 568 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 APLFQ8IW19 511 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 MYH7P12883 1935 aa8.83□□□□□ -1
VPS36-201ENST00000378060 A0A0A6YYK5 440 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 AP3B1O00203 1094 aa8.83□□□□□ -1
VPS36-201ENST00000378060 MYBP10242 640 aa8.83□□□□□ -1
VPS36-201ENST00000378060 KITP10721 976 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ACTR2P61160 394 aa8.83□□□□□ -1
VPS36-201ENST00000378060 SNRNP35Q16560 246 aaKnown RBP8.83□□□□□ -1
VPS36-201ENST00000378060 RASSF3Q86WH2 238 aa8.83□□□□□ -1
VPS36-201ENST00000378060 MYLK4Q86YV6 388 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 BEST2Q8NFU1 509 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ZBTB18Q99592 522 aa8.83□□□□□ -1
VPS36-201ENST00000378060 RTFDC1Q9BY42 306 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 TMBIM4Q9HC24 238 aa8.83□□□□□ -1
VPS36-201ENST00000378060 H3BQF6 201 aa8.83□□□□□ -1
VPS36-201ENST00000378060 NDUFB10O96000 172 aa8.83□□□□□ -1
VPS36-201ENST00000378060 RARGP13631 454 aa8.83□□□□□ -1
VPS36-201ENST00000378060 MED21Q13503 144 aa8.83□□□□□ -1
VPS36-201ENST00000378060 SEC23AQ15436 765 aa8.83□□□□□ -1
VPS36-201ENST00000378060 XKR3Q5GH77 459 aa8.83□□□□□ -1
VPS36-201ENST00000378060 SNRNP48Q6IEG0 339 aaKnown RBP8.83□□□□□ -1
VPS36-201ENST00000378060 CYB5D1Q6P9G0 228 aa8.83□□□□□ -1
VPS36-201ENST00000378060 EEPD1Q7L9B9 569 aa8.83□□□□□ -1
VPS36-201ENST00000378060 KCNK16Q96T55 309 aa8.83□□□□□ -1
VPS36-201ENST00000378060 CELF4Q9BZC1 486 aaKnown RBP8.83□□□□□ -1
VPS36-201ENST00000378060 TMEM8AQ9HCN3 771 aa8.83□□□□□ -1
VPS36-201ENST00000378060 DOCK2Q92608 1830 aa8.83□□□□□ -1
VPS36-201ENST00000378060 SBF1O95248 1867 aa8.83□□□□□ -1
VPS36-201ENST00000378060 RNF103-CHMP3A0A140T963 221 aa8.83□□□□□ -1
VPS36-201ENST00000378060 PIK3R2O00459 728 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ZBTB22O15209 634 aa8.83□□□□□ -1
VPS36-201ENST00000378060 NVLO15381 856 aaKnown RBP8.83□□□□□ -1
VPS36-201ENST00000378060 HUS1O60921 280 aa8.83□□□□□ -1
VPS36-201ENST00000378060 PLEKP08567 350 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 HERVK_113P62684 666 aa8.83□□□□□ -1
VPS36-201ENST00000378060 OCA2Q04671 838 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ST3GAL1Q11201 340 aa8.83□□□□□ -1
VPS36-201ENST00000378060 KIF19Q2TAC6 998 aa8.83□□□□□ -1
VPS36-201ENST00000378060 LONP2Q86WA8 852 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.83□□□□□ -1
VPS36-201ENST00000378060 CEP70Q8NHQ1 597 aa8.83□□□□□ -1
VPS36-201ENST00000378060 TTC8Q8TAM2 541 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ARL8AQ96BM9 186 aa8.83□□□□□ -1
VPS36-201ENST00000378060 JMJD4Q9H9V9 463 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ANLNQ9NQW6 1124 aa8.83□□□□□ -1
VPS36-201ENST00000378060 ZFATQ9P243 1243 aa8.83□□□□□ -1
VPS36-201ENST00000378060 MAGED2Q9UNF1 606 aaPredicted RBP8.83□□□□□ -1
VPS36-201ENST00000378060 L3MBTL1Q9Y468 752 aa8.83□□□□□ -1
VPS36-201ENST00000378060 LRRC10BA6NIK2 292 aa8.82□□□□□ -1
VPS36-201ENST00000378060 H3BRJ5 948 aa8.82□□□□□ -1
VPS36-201ENST00000378060 KLHL2O95198 593 aa8.82□□□□□ -1
VPS36-201ENST00000378060 CYP11B2P19099 503 aa8.82□□□□□ -1
VPS36-201ENST00000378060 MUTP22033 750 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ZNF200P98182 395 aaPredicted RBP8.82□□□□□ -1
VPS36-201ENST00000378060 IL1RL1Q01638 556 aa8.82□□□□□ -1
VPS36-201ENST00000378060 STX3Q13277 289 aa8.82□□□□□ -1
VPS36-201ENST00000378060 GRB10Q13322 594 aa8.82□□□□□ -1
VPS36-201ENST00000378060 EFTUD2Q15029 972 aaKnown RBP eCLIP8.82□□□□□ -1
VPS36-201ENST00000378060 HHIPL2Q6UWX4 724 aa8.82□□□□□ -1
VPS36-201ENST00000378060 C4orf22Q6V702 233 aa8.82□□□□□ -1
VPS36-201ENST00000378060 CCNYL1Q8N7R7 359 aa8.82□□□□□ -1
VPS36-201ENST00000378060 DNAJC9Q8WXX5 260 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ARHGEF26Q96DR7 871 aa8.82□□□□□ -1
VPS36-201ENST00000378060 DTNBP1Q96EV8 351 aa8.82□□□□□ -1
VPS36-201ENST00000378060 TRPV6Q9H1D0 765 aa8.82□□□□□ -1
VPS36-201ENST00000378060 GPR75-ASB3A0A0A6YYF3 556 aa8.82□□□□□ -1
VPS36-201ENST00000378060 F8W8V4 182 aa8.82□□□□□ -1
VPS36-201ENST00000378060 APOL1O14791 398 aa8.82□□□□□ -1
VPS36-201ENST00000378060 IL1R1P14778 569 aa8.82□□□□□ -1
VPS36-201ENST00000378060 CIITAP33076 1130 aa8.82□□□□□ -1
VPS36-201ENST00000378060 SLC30A9Q6PML9 568 aa8.82□□□□□ -1
VPS36-201ENST00000378060 MSL3Q8N5Y2 521 aaKnown RBP8.82□□□□□ -1
VPS36-201ENST00000378060 SLC30A5Q8TAD4 765 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ZSWIM1Q9BR11 485 aa8.82□□□□□ -1
VPS36-201ENST00000378060 NOD2Q9HC29 1040 aa8.82□□□□□ -1
VPS36-201ENST00000378060 UBN1Q9NPG3 1134 aa8.82□□□□□ -1
VPS36-201ENST00000378060 GTSE1Q9NYZ3 720 aa8.82□□□□□ -1
VPS36-201ENST00000378060 DUSP10Q9Y6W6 482 aa8.82□□□□□ -1
VPS36-201ENST00000378060 FAM237AA0A1B0GTK4 181 aa8.82□□□□□ -1
VPS36-201ENST00000378060 PI4K2BG5E9Z4 385 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ENTPD3O75355 529 aa8.82□□□□□ -1
VPS36-201ENST00000378060 SNRPAP09012 282 aaKnown RBP8.82□□□□□ -1
VPS36-201ENST00000378060 GZMAP12544 262 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ITGA8P53708 1063 aa8.82□□□□□ -1
VPS36-201ENST00000378060 EFHC2Q5JST6 749 aa8.82□□□□□ -1
VPS36-201ENST00000378060 DSTYKQ6XUX3 929 aa8.82□□□□□ -1
VPS36-201ENST00000378060 LRRC43Q8N309 656 aa8.82□□□□□ -1
VPS36-201ENST00000378060 SKA2Q8WVK7 121 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms