RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MYL4P12829 197 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 PLS3P13797 630 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 CPB1P15086 417 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 GDI1P31150 447 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 SPAG1Q07617 926 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 MCL1Q07820 350 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 HYIQ5T013 277 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 ZPBP2Q6X784 338 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 LEMD2Q8NC56 503 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 ZSCAN18Q8TBC5 510 aaPredicted RBP15.04■□□□□ -0
CXCL12-202ENST00000374426 DEPDC1BQ8WUY9 529 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 KIF2CQ99661 725 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 FAM126AQ9BYI3 521 aaPredicted RBP15.04■□□□□ -0
CXCL12-202ENST00000374426 ASAH2Q9NR71 780 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 TIMM13Q9Y5L4 95 aaPredicted RBP15.04■□□□□ -0
CXCL12-202ENST00000374426 PIAS3Q9Y6X2 628 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 CHD8Q9HCK8 2581 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 PDCD11Q14690 1871 aaKnown RBP15.03■□□□□ -0
CXCL12-202ENST00000374426 TTC26A0AVF1 554 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 ARNTLO00327 626 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 CLDN3O15551 220 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 OAZ2O95190 189 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 TGM1P22735 817 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 MARCKSP29966 332 aaPredicted RBP15.03■□□□□ -0
CXCL12-202ENST00000374426 LRPAP1P30533 357 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 AARSP49588 968 aaKnown RBP eCLIP15.03■□□□□ -0
CXCL12-202ENST00000374426 SMTNP53814 917 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 YWHAHQ04917 246 aaPredicted RBP15.03■□□□□ -0
CXCL12-202ENST00000374426 TEAD2Q15562 447 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 ZRSR1Q15695 479 aaKnown RBP15.03■□□□□ -0
CXCL12-202ENST00000374426 ZBTB6Q15916 424 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 MAMSTRQ6ZN01 415 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 GPR161Q8N6U8 529 aaKnown RBP15.03■□□□□ -0
CXCL12-202ENST00000374426 SYT2Q8N9I0 419 aaPredicted RBP15.03■□□□□ -0
CXCL12-202ENST00000374426 SHKBP1Q8TBC3 707 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 FAM3CQ92520 227 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 PNMA5Q96PV4 448 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 LRRC3Q9BY71 257 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 CRISPLD1Q9H336 500 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 PLEKHA5Q9HAU0 1116 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 YIPF1Q9Y548 306 aa15.03■□□□□ -0
CXCL12-202ENST00000374426 TICRRQ7Z2Z1 1910 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 CLTAP09496 248 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 OR4Q2P0C623 313 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 SLC12A3P55017 1021 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 TMC8Q8IU68 726 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 MFSD6LQ8IWD5 586 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 SECISBP2LQ93073 1101 aaKnown RBP15.02■□□□□ -0
CXCL12-202ENST00000374426 RSPRY1Q96DX4 576 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 KIF12Q96FN5 646 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 PGLYRP2Q96PD5 576 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 PLIN2Q99541 437 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 DNAJC25Q9H1X3 360 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 LMAN1LQ9HAT1 526 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 KCNG1Q9UIX4 513 aa15.02■□□□□ -0
CXCL12-202ENST00000374426 NPHP3-ACAD11A0A0J9YXS1 232 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 HEPACAM2A8MVW5 462 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 ZNF263O14978 683 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 CHRNB1P11230 501 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 CCNE1P24864 410 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 TNFSF9P41273 254 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 GUCY2FP51841 1108 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 ATP2C1P98194 919 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-202ENST00000374426 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-202ENST00000374426 DUSP4Q13115 394 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 GAS6Q14393 721 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 KCTD17Q8N5Z5 321 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 IER2Q9BTL4 223 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 OXCT2Q9BYC2 517 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-202ENST00000374426 GPR88Q9GZN0 384 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 SLITRK6Q9H5Y7 841 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 PARD6AQ9NPB6 346 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 KCND2Q9NZV8 630 aa15.01□□□□□ -0.01
CXCL12-202ENST00000374426 UBQLN1Q9UMX0 589 aaKnown RBP15.01□□□□□ -0.01
CXCL12-202ENST00000374426 MYH11P35749 1972 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 A0A1W2PRU2 124 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 OR6C75A6NL08 312 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 LACTBL1A8MY62 500 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 PPEF2O14830 753 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 FAM189A1O60320 539 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 PLA2G4BP0C869 781 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 CYP3A5P20815 502 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 MATR3P43243 847 aaKnown RBP eCLIP15□□□□□ -0.01
CXCL12-202ENST00000374426 CCR3P51677 355 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 ATXN1P54253 815 aaKnown RBP15□□□□□ -0.01
CXCL12-202ENST00000374426 NRLP54845 237 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 NCKAP1LP55160 1127 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 LMNB2Q03252 620 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 GPR17Q13304 367 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 ENOX2Q16206 610 aaKnown RBP15□□□□□ -0.01
CXCL12-202ENST00000374426 TMEM119Q4V9L6 283 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 RILPL1Q5EBL4 403 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 ARSHQ5FYA8 562 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 STXBP5Q5T5C0 1151 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 HAUS6Q7Z4H7 955 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 USP37Q86T82 979 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 KCNN1Q92952 543 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 BICD1Q96G01 975 aa15□□□□□ -0.01
CXCL12-202ENST00000374426 VWA3AA6NCI4 1184 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 PRR5-ARHGAP8B1AHC4 643 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms