RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 AKAP5P24588 427 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 CASP14P31944 242 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 ABCD1P33897 745 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 KRT9P35527 623 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 NPTX2P47972 431 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 YARSP54577 528 aaKnown RBP11.22□□□□□ -0.61
COL5A1-202ENST00000371820 KRT31Q15323 416 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 TMEM119Q4V9L6 283 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 KLHL10Q6JEL2 608 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 CC2D1AQ6P1N0 951 aaPredicted RBP11.22□□□□□ -0.61
COL5A1-202ENST00000371820 CNNM4Q6P4Q7 775 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 KCNK18Q7Z418 384 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 SUGP1Q8IWZ8 645 aaKnown RBP11.22□□□□□ -0.61
COL5A1-202ENST00000371820 GPR65Q8IYL9 337 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 FBXL6Q8N531 539 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 MSANTD4Q8NCY6 345 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 ASIC4Q96FT7 647 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 ZFP42Q96MM3 310 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 NECTIN4Q96NY8 510 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 C7orf25Q9BPX7 421 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 RUSC1Q9BVN2 902 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 TSPYL1Q9H0U9 437 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 NUCKS1Q9H1E3 243 aaKnown RBP11.22□□□□□ -0.61
COL5A1-202ENST00000371820 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 TOPORSQ9NS56 1045 aaPredicted RBP11.22□□□□□ -0.61
COL5A1-202ENST00000371820 ABHD10Q9NUJ1 306 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 CWC15Q9P013 229 aaKnown RBP11.22□□□□□ -0.61
COL5A1-202ENST00000371820 DPP7Q9UHL4 492 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 CDH22Q9UJ99 828 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 RAB21Q9UL25 225 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 ODF2LQ9ULJ1 636 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 TNFSF13BQ9Y275 285 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
COL5A1-202ENST00000371820 FHOD1Q9Y613 1164 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 PVALEFA0A1B0GWK0 134 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 A0A1W2PQJ5 194 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 CLASP2O75122 1294 aaKnown RBP11.21□□□□□ -0.61
COL5A1-202ENST00000371820 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
COL5A1-202ENST00000371820 THP07101 528 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 ADH1AP07327 375 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 PLS3P13797 630 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 CCNE1P24864 410 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
COL5A1-202ENST00000371820 PTPN5P54829 565 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 SLC12A3P55017 1021 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 CREMQ03060 361 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 UBXN1Q04323 297 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 ITIH3Q06033 890 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 MAPK7Q13164 816 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 TUSC3Q13454 348 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 ZNF568Q3ZCX4 644 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 ZNF569Q5MCW4 686 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 IER5LQ5T953 404 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 TOGARAM2Q6ZUX3 1019 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 DAW1Q8N136 415 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 RIPOR3Q96MK2 946 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 PRRX2Q99811 253 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.61
COL5A1-202ENST00000371820 PARD6BQ9BYG5 372 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 ADAM7Q9H2U9 754 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
COL5A1-202ENST00000371820 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL5A1-202ENST00000371820 KBTBD4Q9NVX7 518 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 SNTG2Q9NY99 539 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 ARHGAP28Q9P2N2 729 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL5A1-202ENST00000371820 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.61
COL5A1-202ENST00000371820 SF3B1O75533 1304 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 ANO9A1A5B4 782 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 A6NNZ2 444 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 LGALS16A8MUM7 142 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 TEX33O43247 280 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 B4GALT3O60512 393 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 TADA2AO75478 443 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 FAM13AO94988 1023 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 C1RP00736 705 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 CD44P16070 742 aaKnown RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 SP100P23497 879 aaPredicted RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 KLRC2P26717 231 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 GRM5P41594 1212 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 MTHFRP42898 656 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 GLUD2P49448 558 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 VCPP55072 806 aaKnown RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 STX17P56962 302 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 ZBED6P86452 979 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 ELAVL2Q12926 359 aaKnown RBP11.2□□□□□ -0.62
COL5A1-202ENST00000371820 USP41Q3LFD5 358 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 TUBB8Q3ZCM7 444 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 HSP90B2PQ58FF3 399 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 EEF1DP3Q658K8 133 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 FUT10Q6P4F1 479 aa11.2□□□□□ -0.62
COL5A1-202ENST00000371820 USP49Q70CQ1 688 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms