RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 HACE1Q8IYU2 909 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 DNAAF3Q8N9W5 541 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 RAPGEF5Q92565 580 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 PPP1R12CQ9BZL4 782 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 AP5M1Q9H0R1 490 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 DHX35Q9H5Z1 703 aaKnown RBP8.94□□□□□ -0.98
PTPRK-206ENST00000368215 MAP3K20Q9NYL2 800 aaKnown RBP8.94□□□□□ -0.98
PTPRK-206ENST00000368215 COL18A1P39060 1754 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 A8MXQ7 604 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 NPM3O75607 178 aaKnown RBP8.94□□□□□ -0.98
PTPRK-206ENST00000368215 STAMBPO95630 424 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 NAMPTP43490 491 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 RAP1GAPP47736 663 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 ZNF844Q08AG5 666 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 FKBP1CQ5VVH2 108 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 IER5Q5VY09 327 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 TMC3Q7Z5M5 1100 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 VSIG10LQ86VR7 867 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 MAP4K3Q8IVH8 894 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 TMEM161BQ8NDZ6 487 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 LENG9Q96B70 501 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 SMARCAD1Q9H4L7 1026 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 FGFR1OP2Q9NVK5 253 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 RIPK3Q9Y572 518 aa8.94□□□□□ -0.98
PTPRK-206ENST00000368215 ITGB3P05106 788 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MAPTP10636 758 aaKnown RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MAGEA4P43358 317 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 FNTAP49354 379 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 NIPA1Q7RTP0 329 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 SIAH1Q8IUQ4 282 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MCOLN2Q8IZK6 566 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 SIX6OS1Q8N1H7 587 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ZSWIM2Q8NEG5 633 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ZNF526Q8TF50 670 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ACAP3Q96P50 834 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 DDX56Q9NY93 547 aaKnown RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 AJAP1Q9UKB5 411 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 CICQ96RK0 1608 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ASTN2O75129 1339 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 PEX10O60683 326 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 PDGFRBP09619 1106 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 PTPRAP18433 802 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 CORO7P57737 925 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MRPS9P82933 396 aaKnown RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 TWF2Q6IBS0 349 aaKnown RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ZNF677Q86XU0 584 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 CCDC125Q86Z20 511 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 EMC1Q8N766 993 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 SPIRE2Q8WWL2 714 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ALG3Q92685 438 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 RAB3IPQ96QF0 476 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 CDC42EP4Q9H3Q1 356 aaKnown RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 WRAP73Q9P2S5 460 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MARF1Q9Y4F3 1742 aaKnown RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 OGTO15294 1046 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 CDH16O75309 829 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MYL3P08590 195 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 GTF2BQ00403 316 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ROR1Q01973 937 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 C11orf63Q6NUN7 778 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ANO5Q75V66 913 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MAML1Q92585 1016 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 CDKL2Q92772 493 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 TTC25Q96NG3 672 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 TRABDQ9H4I3 376 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 EFCC1Q9HA90 598 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 SMYD2Q9NRG4 433 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 METTL5Q9NRN9 209 aaKnown RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 HAUS2Q9NVX0 235 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 MYH6P13533 1939 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 A0A1B0GUA9 196 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 ARHGAP42A6NI28 874 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 RBAK-RBAKDNI3L0D1 243 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 CREB3O43889 395 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 TOM1L1O75674 476 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 LCP1P13796 627 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 STAT4Q14765 748 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 KIF22Q14807 665 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 LLGL2Q6P1M3 1020 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 LRRC34Q8IZ02 419 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 PDGFDQ9GZP0 370 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-206ENST00000368215 SPC25Q9HBM1 224 aa8.93□□□□□ -0.98
PTPRK-206ENST00000368215 IQANK1A0A1B0GTG1 560 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 CCNE2O96020 404 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 SPIRE1Q08AE8 756 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 TMEM132DQ14C87 1099 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 FOXR2Q6PJQ5 311 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 CGRRF1Q99675 332 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 DDX23Q9BUQ8 820 aaKnown RBP8.92□□□□□ -0.98
PTPRK-206ENST00000368215 KLC2Q9H0B6 622 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 CHST7Q9NS84 486 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 CISHQ9NSE2 258 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 SYNPO2Q9UMS6 1093 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 ASB14A6NK59 587 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 DDNO94850 711 aaPredicted RBP8.92□□□□□ -0.98
PTPRK-206ENST00000368215 PROSCO94903 275 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 LCA5LO95447 670 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 RBP3P10745 1247 aa8.92□□□□□ -0.98
PTPRK-206ENST00000368215 SLC8A1P32418 973 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms