RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 F8VP50 259 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 GPR39O43194 453 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 B4GALT5O43286 388 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 ACOT2P49753 483 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 EPHA7Q15375 998 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 FBXO48Q5FWF7 155 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 DCAF17Q5H9S7 520 aaPredicted RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 ARTNQ5T4W7 220 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 TREML1Q86YW5 311 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 OGFOD1Q8N543 542 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 GPR161Q8N6U8 529 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 SNX29Q8TEQ0 813 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 AGAP11Q8TF27 550 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 SYAP1Q96A49 352 aaPredicted RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 NXF1Q9UBU9 619 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 JRKLQ9Y4A0 524 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 ARIH1Q9Y4X5 557 aaPredicted RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 PTPRDP23468 1912 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 CXorf49A8MYA2 514 aaPredicted RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 AURKAO14965 403 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 KIAA0391O15091 583 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 ACSL3O95573 720 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 PRKCGP05129 697 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 HOXD8P13378 290 aaPredicted RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 NNTQ13423 1086 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 C12orf29Q8N999 325 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 CLEC4CQ8WTT0 213 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 CPA5Q8WXQ8 436 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 NSMCE3Q96MG7 304 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 B3GNT5Q9BYG0 378 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 CCSER1Q9C0I3 900 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 FGFR1OP2Q9NVK5 253 aa6.07□□□□□ -1.44
CD47-201ENST00000355354 NOVA2Q9UNW9 492 aaKnown RBP6.07□□□□□ -1.44
CD47-201ENST00000355354 USP1O94782 785 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CCND3P30281 292 aaPredicted RBP6.06□□□□□ -1.44
CD47-201ENST00000355354 PTGIRP43119 386 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CPA2P48052 419 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 AARSP49588 968 aaKnown RBP eCLIP6.06□□□□□ -1.44
CD47-201ENST00000355354 CYP2J2P51589 502 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 TRMT10BQ6PF06 316 aaKnown RBP6.06□□□□□ -1.44
CD47-201ENST00000355354 SHCBP1Q8NEM2 672 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CCT6BQ92526 530 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 AZIN2Q96A70 460 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 ERGIC2Q96RQ1 377 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 FAM167BQ9BTA0 163 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.06□□□□□ -1.44
CD47-201ENST00000355354 LUC7L2Q9Y383 392 aaKnown RBP6.06□□□□□ -1.44
CD47-201ENST00000355354 TMEM265A0A087WTH1 108 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CCDC78A2IDD5 438 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 KIAA0355O15063 1070 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 NEMFO60524 1076 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 UBOX5O94941 541 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 LETM1O95202 739 aaPredicted RBP6.06□□□□□ -1.44
CD47-201ENST00000355354 KRT2P35908 639 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 NOP14P78316 857 aaKnown RBP6.06□□□□□ -1.44
CD47-201ENST00000355354 CCL14Q16627 93 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 LRRC34Q8IZ02 419 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 FUKQ8N0W3 1084 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 EPAS1Q99814 870 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CPA4Q9UI42 421 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 PCDHA4Q9UN74 947 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 PCDHGC5Q9Y5F6 944 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 PCDHA1Q9Y5I3 950 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CCDC168Q8NDH2 2452 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CLDN3O15551 220 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 PLA2G6O60733 806 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 ZMPSTE24O75844 475 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 SLC5A1P13866 664 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 NR2F2P24468 414 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CASQ1P31415 396 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 UBA7P41226 1012 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 MEI1Q5TIA1 1274 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 TLDC1Q6P9B6 456 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 C1orf186Q6ZWK4 172 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 GPATCH11Q8N954 259 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CDHR5Q9HBB8 845 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 C11orf16Q9NQ32 467 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 NFASCO94856 1347 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CYP26A1O43174 497 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 DNAJC6O75061 913 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 ETS2P15036 469 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 CCNE1P24864 410 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 SSTR1P30872 391 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 MAGEA1P43355 309 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 FLT3LGP49771 235 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 NAPAP54920 295 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 TMC3Q7Z5M5 1100 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 OSBPL1AQ9BXW6 950 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 TBX21Q9UL17 535 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 NEU2Q9Y3R4 380 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 ATP6V1DQ9Y5K8 247 aa6.06□□□□□ -1.44
CD47-201ENST00000355354 ERCC5P28715 1186 aaPredicted RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 PMS2P54278 862 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 CTC1Q2NKJ3 1217 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 HSDL1Q3SXM5 330 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 UTS2BQ765I0 119 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 ZNF467Q7Z7K2 595 aaPredicted RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.05□□□□□ -1.44
CD47-201ENST00000355354 NEDD1Q8NHV4 660 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 NOC3LQ8WTT2 800 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms