RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 HOXC10Q9NYD6 342 aa17.5■□□□□ 0.39
SATB1-201ENST00000338745 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
SATB1-201ENST00000338745 C21orf2O43822 256 aa17.5■□□□□ 0.39
SATB1-201ENST00000338745 MAP3K4Q9Y6R4 1608 aa17.5■□□□□ 0.39
SATB1-201ENST00000338745 HMBSP08397 361 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 WEE2P0C1S8 567 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 CYLC2Q14093 348 aaPredicted RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 SH3TC2Q8TF17 1288 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 PKP3Q9Y446 797 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 COPG1Q9Y678 874 aaKnown RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 ORC2Q13416 577 aaPredicted RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 CIAPIN1Q6FI81 312 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 CNDP1Q96KN2 507 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 GLI2P10070 1586 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 KYNUQ16719 465 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 SPATA2LQ8IUW3 424 aaPredicted RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 WRNIP1Q96S55 665 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 QTRT2Q9H974 415 aaKnown RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 GID8Q9NWU2 228 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 H2AFY2Q9P0M6 372 aaPredicted RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 FARP1Q9Y4F1 1045 aaPredicted RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 CPB1P15086 417 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 RCN1Q15293 331 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 NSUN6Q8TEA1 469 aaKnown RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 C18orf8Q96DM3 657 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 TUFT1Q9NNX1 390 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 ZC3H4Q9UPT8 1303 aaKnown RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 SEC24CP53992 1094 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 QRICH1Q2TAL8 776 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
SATB1-201ENST00000338745 SHCBP1LQ9BZQ2 653 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.49■□□□□ 0.39
SATB1-201ENST00000338745 DPYSL4O14531 572 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 MAGEA4P43358 317 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 TSPAN17Q96FV3 270 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 ZSCAN32Q9NX65 697 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 ADCY10Q96PN6 1610 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 SERPINB1P30740 379 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 RIN3Q8TB24 985 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 KCNK16Q96T55 309 aa17.49■□□□□ 0.39
SATB1-201ENST00000338745 NFIBO00712 420 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 PIGHQ14442 188 aaPredicted RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 SCN3BQ9NY72 215 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 SERPINB5P36952 375 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 CLK1P49759 484 aaKnown RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 SH2D3AQ9BRG2 576 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 PSMD3O43242 534 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 CDH2P19022 906 aaPredicted RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 HSD17B4P51659 736 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 PCYOX1LQ8NBM8 494 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 PDLIM2Q96JY6 352 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 REEP2Q9BRK0 252 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 NOD2Q9HC29 1040 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 FMO5P49326 533 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 CYP4A22Q5TCH4 519 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 CHORDC1Q9UHD1 332 aaPredicted RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 C3orf70A6NLC5 250 aaPredicted RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 M0R3G1 203 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 EEF2KO00418 725 aaKnown RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 TRIP4Q15650 581 aaPredicted RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 HAUS6Q7Z4H7 955 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 RAB42Q8N4Z0 105 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 ASZ1Q8WWH4 475 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 PRPF18Q99633 342 aaKnown RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 CAAP1Q9H8G2 361 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 RNF146Q9NTX7 359 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 GSG1L2A8MUP6 293 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 FOXP2O15409 715 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 NDUFS3O75489 264 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 NUDT2P50583 147 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 FXR1P51114 621 aaKnown RBP eCLIP17.48■□□□□ 0.39
SATB1-201ENST00000338745 ACSF2Q96CM8 615 aaPredicted RBP17.48■□□□□ 0.39
SATB1-201ENST00000338745 DYRK4Q9NR20 520 aa17.48■□□□□ 0.39
SATB1-201ENST00000338745 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 GUCA1CO95843 209 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 KRT87PA6NCN2 255 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 VHLP40337 213 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 NAB2Q15742 525 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 SH3GL2Q99962 352 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 POLRMTO00411 1230 aaKnown RBP17.47■□□□□ 0.39
SATB1-201ENST00000338745 EYA4O95677 639 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 PDGFRBP09619 1106 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 DDX5P17844 614 aaKnown RBP17.47■□□□□ 0.39
SATB1-201ENST00000338745 MROH9Q5TGP6 573 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 C11orf96Q7Z7L8 435 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 TNIP2Q8NFZ5 429 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 USP11P51784 963 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 TMEM143Q96AN5 459 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 TSC22D2O75157 780 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 MUC3BQ9H195 1237 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 USP1O94782 785 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 DEFA1P59665 94 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 DEFA3P59666 94 aa17.47■□□□□ 0.39
SATB1-201ENST00000338745 TTC33Q6PID6 262 aaPredicted RBP17.47■□□□□ 0.39
SATB1-201ENST00000338745 ELMSAN1Q6PJG2 1045 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms