RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SLC38A7Q9NVC3 462 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 GPD1P21695 349 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 THAP2Q9H0W7 228 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 NDFIP2Q9NV92 336 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 OR2W6PQ8NHA6 318 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 BTBD6Q96KE9 485 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 C17orf75Q9HAS0 396 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 AFF4Q9UHB7 1163 aaKnown RBP18.11■□□□□ 0.49
CDCP1-201ENST00000296129 COL5A2P05997 1499 aaPredicted RBP18.11■□□□□ 0.49
CDCP1-201ENST00000296129 TAL1P17542 331 aaPredicted RBP18.11■□□□□ 0.49
CDCP1-201ENST00000296129 EEF1B2P24534 225 aaKnown RBP18.11■□□□□ 0.49
CDCP1-201ENST00000296129 BACE1P56817 501 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 ATPAF2Q8N5M1 289 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 SEMA6BQ9H3T3 888 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 DBR1Q9UK59 544 aaKnown RBP18.11■□□□□ 0.49
CDCP1-201ENST00000296129 GRIN3BO60391 1043 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 DEUP1Q05D60 604 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 NOTUMQ6P988 496 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDCP1-201ENST00000296129 C9orf72Q96LT7 481 aa18.11■□□□□ 0.49
CDCP1-201ENST00000296129 FAF1Q9UNN5 650 aaPredicted RBP18.11■□□□□ 0.49
CDCP1-201ENST00000296129 CUL2Q13617 745 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 LCA5Q86VQ0 697 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 TMX2Q9Y320 296 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 MYO1CO00159 1063 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 ESRRBO95718 433 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 MAGEA9P43362 315 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 CASP4P49662 377 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 CPT1AP50416 773 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 NLRP11P59045 1033 aaKnown RBP18.1■□□□□ 0.49
CDCP1-201ENST00000296129 FEZF2Q8TBJ5 459 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 RNF217Q8TC41 542 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 SH3TC2Q8TF17 1288 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 TRPV6Q9H1D0 765 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 SALL1Q9NSC2 1324 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 MROH1Q8NDA8 1641 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 TCP11X1B4DZS4 312 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 HUNKP57058 714 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 C1orf131Q8NDD1 294 aaKnown RBP18.1■□□□□ 0.49
CDCP1-201ENST00000296129 SLC7A14Q8TBB6 771 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 DNAJC7Q99615 494 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 VIPAS39Q9H9C1 493 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 KBTBD4Q9NVX7 518 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 CHN1P15882 459 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 ZBTB41Q5SVQ8 909 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 ASAP3Q8TDY4 903 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 NOP53Q9NZM5 478 aaKnown RBP18.1■□□□□ 0.49
CDCP1-201ENST00000296129 ZC3H7BQ9UGR2 993 aaKnown RBP18.1■□□□□ 0.49
CDCP1-201ENST00000296129 RRN3P2A6NIE6 340 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 C3orf70A6NLC5 250 aaPredicted RBP18.1■□□□□ 0.49
CDCP1-201ENST00000296129 SGPL1O95470 568 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 MORF4L2Q15014 288 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 TRIM65Q6PJ69 517 aa18.1■□□□□ 0.49
CDCP1-201ENST00000296129 CCDC78A2IDD5 438 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 ANP32DO95626 131 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 ESRRGP62508 458 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 CDR2Q01850 454 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 RGS9BPQ6ZS82 235 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 CBWD2Q8IUF1 395 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 DDX50Q9BQ39 737 aaKnown RBP18.09■□□□□ 0.49
CDCP1-201ENST00000296129 IL17RBQ9NRM6 502 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDCP1-201ENST00000296129 BCL9O00512 1426 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 GNL1P36915 607 aaPredicted RBP18.09■□□□□ 0.49
CDCP1-201ENST00000296129 MDH1P40925 334 aaKnown RBP18.09■□□□□ 0.49
CDCP1-201ENST00000296129 ACADSBP45954 432 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 ACAD10Q6JQN1 1059 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 TPCN2Q8NHX9 752 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 ARL8AQ96BM9 186 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 SEPT5Q99719 369 aaPredicted RBP18.09■□□□□ 0.49
CDCP1-201ENST00000296129 RIOX1Q9H6W3 641 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 CFAP69A5D8W1 941 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 MGEA5O60502 916 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 VCAM1P19320 739 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 NUDT12Q9BQG2 462 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 PGK2P07205 417 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 SUPT20HL2P0C7V6 817 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 ANO4Q32M45 955 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 ACSF2Q96CM8 615 aaPredicted RBP18.09■□□□□ 0.49
CDCP1-201ENST00000296129 PXMP2Q9NR77 195 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 DPP3Q9NY33 737 aa18.09■□□□□ 0.49
CDCP1-201ENST00000296129 UPP2O95045 317 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 DEFB132Q7Z7B7 95 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 REXO1L1PQ8IX06 675 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 NOA1Q8NC60 698 aaKnown RBP18.08■□□□□ 0.49
CDCP1-201ENST00000296129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.08■□□□□ 0.49
CDCP1-201ENST00000296129 SENP1Q9P0U3 644 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 EFTUD2Q15029 972 aaKnown RBP eCLIP18.08■□□□□ 0.49
CDCP1-201ENST00000296129 DCAF6Q58WW2 860 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 PCNX4Q63HM2 1172 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 DDX42Q86XP3 938 aaKnown RBP eCLIP18.08■□□□□ 0.49
CDCP1-201ENST00000296129 DDIASQ8IXT1 998 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 SPATA18Q8TC71 538 aa18.08■□□□□ 0.49
CDCP1-201ENST00000296129 FARP1Q9Y4F1 1045 aaPredicted RBP18.08■□□□□ 0.49
CDCP1-201ENST00000296129 NFIBO00712 420 aa18.08■□□□□ 0.48
CDCP1-201ENST00000296129 TTI2Q6NXR4 508 aa18.08■□□□□ 0.48
CDCP1-201ENST00000296129 EHD2Q9NZN4 543 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms