RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 IFT88Q13099 833 aa26.64■■□□□ 1.86
ROM1-201ENST00000278833 TARBP2Q15633 366 aaKnown RBP26.64■■□□□ 1.86
ROM1-201ENST00000278833 C1orf54Q8WWF1 131 aa26.64■■□□□ 1.86
ROM1-201ENST00000278833 CPA5Q8WXQ8 436 aa26.64■■□□□ 1.86
ROM1-201ENST00000278833 TRPM7Q96QT4 1865 aa26.64■■□□□ 1.85
ROM1-201ENST00000278833 ATP5DP30049 168 aa26.64■■□□□ 1.85
ROM1-201ENST00000278833 ZPBP2Q6X784 338 aa26.64■■□□□ 1.85
ROM1-201ENST00000278833 CEP128Q6ZU80 1094 aa26.64■■□□□ 1.85
ROM1-201ENST00000278833 CCDC121Q6ZUS5 278 aa26.64■■□□□ 1.85
ROM1-201ENST00000278833 ZKSCAN4Q969J2 545 aaPredicted RBP26.64■■□□□ 1.85
ROM1-201ENST00000278833 TRIM7Q9C029 511 aa26.64■■□□□ 1.85
ROM1-201ENST00000278833 PAPPA2Q9BXP8 1791 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 K7ERI5 159 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 GNA15P30679 374 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 MAMLD1Q13495 774 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 EPS8L3Q8TE67 593 aaKnown RBP26.63■■□□□ 1.85
ROM1-201ENST00000278833 HERPUD2Q9BSE4 406 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 ADAM22Q9P0K1 906 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 ASIC3Q9UHC3 531 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 CAPN7Q9Y6W3 813 aa26.63■■□□□ 1.85
ROM1-201ENST00000278833 PTPRFP10586 1907 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 NOP14P78316 857 aaKnown RBP26.62■■□□□ 1.85
ROM1-201ENST00000278833 IFI35P80217 286 aaPredicted RBP26.62■■□□□ 1.85
ROM1-201ENST00000278833 SP2Q02086 613 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 ITIH4Q14624 930 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 BRSK2Q8IWQ3 736 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 RBBP8NLQ8NC74 664 aaPredicted RBP26.62■■□□□ 1.85
ROM1-201ENST00000278833 MDM1Q8TC05 714 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 SLC7A3Q8WY07 619 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 BBXQ8WY36 941 aaPredicted RBP26.62■■□□□ 1.85
ROM1-201ENST00000278833 KLRG1Q96E93 195 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 CABS1Q96KC9 395 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 MSTO1Q9BUK6 570 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 FZD1Q9UP38 647 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 PCDHB4Q9Y5E5 795 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 LSM8O95777 96 aaKnown RBP26.62■■□□□ 1.85
ROM1-201ENST00000278833 ATF2P15336 505 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 ACOT2P49753 483 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 UBAP2Q5T6F2 1119 aaKnown RBP26.62■■□□□ 1.85
ROM1-201ENST00000278833 DRICH1Q6PGQ1 229 aaPredicted RBP26.62■■□□□ 1.85
ROM1-201ENST00000278833 CPLX4Q7Z7G2 160 aa26.62■■□□□ 1.85
ROM1-201ENST00000278833 TTC4O95801 387 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 EDNRBP24530 442 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 PTPN7P35236 360 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 NF2P35240 595 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 APLP1P51693 650 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 PRKG1Q13976 671 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 LRRC38Q5VT99 294 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 PIGWQ7Z7B1 504 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 CCDC89Q8N998 374 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 TMEM143Q96AN5 459 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 SELENOSQ9BQE4 189 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 KDM4CQ9H3R0 1056 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 INTS9Q9NV88 658 aaKnown RBP26.61■■□□□ 1.85
ROM1-201ENST00000278833 AFG3L2Q9Y4W6 797 aa26.61■■□□□ 1.85
ROM1-201ENST00000278833 TLDC2A0PJX2 215 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 ADCY3O60266 1144 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 CALCAP01258 141 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 LMBRD2Q68DH5 695 aaPredicted RBP26.6■■□□□ 1.85
ROM1-201ENST00000278833 SPOPLQ6IQ16 392 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 WDR49Q8IV35 697 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 CCHCR1Q8TD31 782 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 ELMO3Q96BJ8 720 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 OSBPL7Q9BZF2 842 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 PARVAQ9NVD7 372 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 IP6K2Q9UHH9 426 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 LGALS13Q9UHV8 139 aa26.6■■□□□ 1.85
ROM1-201ENST00000278833 LRRIQ4A6NIV6 560 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 ITGA8P53708 1063 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 LMNB2Q03252 620 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 MCL1Q07820 350 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 RNF187Q5TA31 235 aaPredicted RBP26.59■■□□□ 1.85
ROM1-201ENST00000278833 FEZF2Q8TBJ5 459 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 C11orf70Q9BRQ4 267 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 OSBPL8Q9BZF1 889 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 FBXO40Q9UH90 709 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 NUB1Q9Y5A7 615 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 TMEM88BA6NKF7 163 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 RALAP11233 206 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 MMP8P22894 467 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 TAS2R40P59535 323 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 SP4Q02446 784 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 CNGA2Q16280 664 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 ANKRD20A8PQ5CZ79 823 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 TMEM270Q6UE05 265 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 MOB2Q70IA6 237 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 CCDC197Q8NCU1 140 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 TARS2Q9BW92 718 aaKnown RBP26.59■■□□□ 1.85
ROM1-201ENST00000278833 GBA2Q9HCG7 927 aaPredicted RBP26.59■■□□□ 1.85
ROM1-201ENST00000278833 CEP350Q5VT06 3117 aa26.59■■□□□ 1.85
ROM1-201ENST00000278833 FAM189A1O60320 539 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 ASS1P00966 412 aaKnown RBP26.58■■□□□ 1.85
ROM1-201ENST00000278833 ABHD2P08910 425 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 ALDH5A1P51649 535 aaPredicted RBP26.58■■□□□ 1.85
ROM1-201ENST00000278833 EFNA5P52803 228 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 NCOA4Q13772 614 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 CCDC13Q8IYE1 715 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 ATG4AQ8WYN0 398 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 CCT6BQ92526 530 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 RBM41Q96IZ5 413 aaKnown RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms