RNA–Protein interactions for RNA: ENST00000196169.7

TDRD3-201, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-201ENST00000196169 CIITAP33076 1130 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 PAPOLAP51003 745 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 YARSP54577 528 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 TFDP1Q14186 410 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 STAT4Q14765 748 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 LRRC36Q1X8D7 754 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 TSNAXIP1Q2TAA8 658 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 C12orf50Q8NA57 414 aaPredicted RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 IL31RAQ8NI17 732 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SCG3Q8WXD2 468 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 MCUR1Q96AQ8 359 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 CDCA7Q9BWT1 371 aaPredicted RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 TDRD3Q9H7E2 651 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 LRRC42Q9Y546 428 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 ATP9AO75110 1047 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 CETN2P41208 172 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 NSFP46459 744 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 RPL7AP62424 266 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SLC15A2Q16348 729 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 ACSBG2Q5FVE4 666 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SV2AQ7L0J3 742 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 CPXCR1Q8N123 301 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 CCDC89Q8N998 374 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 TTC17Q96AE7 1141 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 CPSF2Q9P2I0 782 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 UVRAGQ9P2Y5 699 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 ZHX2Q9Y6X8 837 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 GYG2O15488 501 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SP100P23497 879 aaPredicted RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 MARK3P27448 753 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 DSG3P32926 999 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 MCOLN2Q8IZK6 566 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 GRK7Q8WTQ7 553 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 DDX1Q92499 740 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 CLPTM1LQ96KA5 538 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 MARCOQ9UEW3 520 aaPredicted RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 STARD13Q9Y3M8 1113 aa12.64□□□□□ -0.39
TDRD3-201ENST00000196169 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.64□□□□□ -0.39
TDRD3-201ENST00000196169 ABCA3Q99758 1704 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 SGK1O00141 431 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 DCTN3O75935 186 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 ITGB5P18084 799 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 CALRP27797 417 aaKnown RBP12.63□□□□□ -0.39
TDRD3-201ENST00000196169 RASSF2P50749 326 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 UGCGQ16739 394 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 CLEC16AQ2KHT3 1053 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 KRT39Q6A163 491 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 FBXO27Q8NI29 283 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 TCP10LQ8TDR4 215 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 CCDC17Q96LX7 622 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 C8orf37Q96NL8 207 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 FAM213AQ9BRX8 229 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 RAB20Q9NX57 234 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 TNRC6CQ9HCJ0 1690 aaKnown RBP12.63□□□□□ -0.39
TDRD3-201ENST00000196169 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 SMAPO00193 183 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 TBX10O75333 385 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 KITP10721 976 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 HARSP12081 509 aaKnown RBP12.63□□□□□ -0.39
TDRD3-201ENST00000196169 NR1H3Q13133 447 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 ALCAMQ13740 583 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 THOC5Q13769 683 aaKnown RBP12.63□□□□□ -0.39
TDRD3-201ENST00000196169 SMAD1Q15797 465 aaKnown RBP12.63□□□□□ -0.39
TDRD3-201ENST00000196169 SEZ6Q53EL9 994 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 MFSD7Q6UXD7 560 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 DENND1AQ8TEH3 1009 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 GRAMD1AQ96CP6 724 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 CFAP57Q96MR6 1250 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 ZNF395Q9H8N7 513 aaPredicted RBP12.63□□□□□ -0.39
TDRD3-201ENST00000196169 KANSL3Q9P2N6 904 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 LGALS13Q9UHV8 139 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 ATAD5Q96QE3 1844 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 ATP8B3O60423 1300 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 SPATA31A5Q5VU36 1347 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 SPATA31A7Q8IWB4 1347 aa12.63□□□□□ -0.39
TDRD3-201ENST00000196169 TLR3O15455 904 aaKnown RBP12.62□□□□□ -0.39
TDRD3-201ENST00000196169 SNUPNO95149 360 aaKnown RBP12.62□□□□□ -0.39
TDRD3-201ENST00000196169 BAG2O95816 211 aa12.62□□□□□ -0.39
TDRD3-201ENST00000196169 CNGA1P29973 690 aa12.62□□□□□ -0.39
TDRD3-201ENST00000196169 NEK3P51956 506 aa12.62□□□□□ -0.39
TDRD3-201ENST00000196169 RBBP5Q15291 538 aaKnown RBP12.62□□□□□ -0.39
TDRD3-201ENST00000196169 PDK4Q16654 411 aa12.62□□□□□ -0.39
TDRD3-201ENST00000196169 PARP6Q2NL67 630 aa12.62□□□□□ -0.39
TDRD3-201ENST00000196169 SMTNL2Q2TAL5 461 aa12.62□□□□□ -0.39
TDRD3-201ENST00000196169 XKR9Q5GH70 373 aa12.62□□□□□ -0.39
TDRD3-201ENST00000196169 C4orf50Q6ZRC1 276 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms