RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C ROG3P43602 733 aa3.24□□□□□ -1.89
NIP100YPL174C CWH41P53008 833 aa3.24□□□□□ -1.89
NIP100YPL174C ECM23Q02710 187 aa3.24□□□□□ -1.89
NIP100YPL174C SLX8P40072 274 aa3.23□□□□□ -1.89
NIP100YPL174C SUM1P46676 1062 aa3.23□□□□□ -1.89
NIP100YPL174C SWI5P08153 709 aa3.23□□□□□ -1.89
NIP100YPL174C HAP4P14064 554 aa3.23□□□□□ -1.89
NIP100YPL174C MRX10Q05648 414 aa3.23□□□□□ -1.89
NIP100YPL174C TSC13Q99190 310 aa3.23□□□□□ -1.89
NIP100YPL174C VAN1P23642 535 aa3.23□□□□□ -1.89
NIP100YPL174C ACO2P39533 789 aa3.23□□□□□ -1.89
NIP100YPL174C SSA4P22202 642 aaKnown RBP3.22□□□□□ -1.89
NIP100YPL174C PHO87P25360 923 aa3.22□□□□□ -1.89
NIP100YPL174C UBX7P38349 436 aa3.22□□□□□ -1.89
NIP100YPL174C APL6P46682 809 aa3.22□□□□□ -1.89
NIP100YPL174C UBP15P50101 1230 aa3.22□□□□□ -1.89
NIP100YPL174C RDS2P19541 446 aaKnown RBP3.22□□□□□ -1.89
NIP100YPL174C CDC19P00549 500 aaKnown RBP3.21□□□□□ -1.9
NIP100YPL174C MSN5P52918 1224 aa3.21□□□□□ -1.9
NIP100YPL174C TY1A-MR1Q04215 440 aa3.21□□□□□ -1.9
NIP100YPL174C GAL2P13181 574 aa3.21□□□□□ -1.9
NIP100YPL174C TTI1P36097 1038 aa3.21□□□□□ -1.9
NIP100YPL174C GAS4Q08271 471 aa3.21□□□□□ -1.9
NIP100YPL174C TRS33Q99394 268 aa3.21□□□□□ -1.9
NIP100YPL174C DAL1P32375 460 aa3.2□□□□□ -1.9
NIP100YPL174C TGL4P36165 910 aa3.2□□□□□ -1.9
NIP100YPL174C KRE33P53914 1056 aaKnown RBP3.2□□□□□ -1.9
NIP100YPL174C STB3Q12427 513 aa3.2□□□□□ -1.9
NIP100YPL174C IRE1P32361 1115 aa3.2□□□□□ -1.9
NIP100YPL174C JJJ2P46997 583 aa3.2□□□□□ -1.9
NIP100YPL174C VTC4P47075 721 aa3.2□□□□□ -1.9
NIP100YPL174C ACS2P52910 683 aaKnown RBP3.2□□□□□ -1.9
NIP100YPL174C FOX2Q02207 900 aaKnown RBP3.2□□□□□ -1.9
NIP100YPL174C HPF1Q05164 967 aa3.2□□□□□ -1.9
NIP100YPL174C LYS5P50113 272 aa3.19□□□□□ -1.9
NIP100YPL174C ADE12P80210 433 aaKnown RBP3.19□□□□□ -1.9
NIP100YPL174C YDL176WQ12027 708 aa3.19□□□□□ -1.9
NIP100YPL174C RLF2Q12495 606 aa3.19□□□□□ -1.9
NIP100YPL174C FPS1P23900 669 aa3.18□□□□□ -1.9
NIP100YPL174C SSN3P39073 555 aa3.18□□□□□ -1.9
NIP100YPL174C MTO1P53070 669 aa3.18□□□□□ -1.9
NIP100YPL174C CUZ1P53899 274 aa3.18□□□□□ -1.9
NIP100YPL174C RPL34AP87262 121 aaPredicted RBP3.18□□□□□ -1.9
NIP100YPL174C Q0182Q9ZZW1 134 aa3.18□□□□□ -1.9
NIP100YPL174C TRK2P28584 889 aa3.18□□□□□ -1.9
NIP100YPL174C PEP12P32854 288 aa3.18□□□□□ -1.9
NIP100YPL174C RPP1AP05318 106 aaPredicted RBP3.17□□□□□ -1.9
NIP100YPL174C NAM8Q00539 523 aaKnown RBP3.17□□□□□ -1.9
NIP100YPL174C PUN1Q06991 263 aa3.17□□□□□ -1.9
NIP100YPL174C DPH6Q12429 685 aa3.17□□□□□ -1.9
NIP100YPL174C NAB2P32505 525 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
NIP100YPL174C MRPL16P38064 232 aa3.17□□□□□ -1.9
NIP100YPL174C DIT1P21623 536 aa3.16□□□□□ -1.9
NIP100YPL174C PDC6P26263 563 aaKnown RBP3.16□□□□□ -1.9
NIP100YPL174C MCM1P11746 286 aa3.15□□□□□ -1.9
NIP100YPL174C MLF3P32047 452 aa3.15□□□□□ -1.9
NIP100YPL174C YNR014WP53719 212 aa3.15□□□□□ -1.9
NIP100YPL174C NSG2P53898 299 aa3.15□□□□□ -1.91
NIP100YPL174C PSH1Q12161 406 aa3.15□□□□□ -1.91
NIP100YPL174C SCD5P34758 872 aa3.14□□□□□ -1.91
NIP100YPL174C THI72Q08579 599 aa3.14□□□□□ -1.91
NIP100YPL174C TY1A-DR3Q12441 440 aa3.14□□□□□ -1.91
NIP100YPL174C AI1P03875 834 aa3.14□□□□□ -1.91
NIP100YPL174C SLA1P32790 1244 aa3.14□□□□□ -1.91
NIP100YPL174C ROM1P53046 1155 aa3.14□□□□□ -1.91
NIP100YPL174C PUS1Q12211 544 aaKnown RBP3.14□□□□□ -1.91
NIP100YPL174C SHM1P37292 490 aaPredicted RBP3.13□□□□□ -1.91
NIP100YPL174C CCP1P00431 361 aa3.13□□□□□ -1.91
NIP100YPL174C NCL1P38205 684 aaKnown RBP3.13□□□□□ -1.91
NIP100YPL174C PUP1P25043 261 aa3.12□□□□□ -1.91
NIP100YPL174C JJJ3P47138 172 aa3.12□□□□□ -1.91
NIP100YPL174C YML083CQ04526 418 aa3.12□□□□□ -1.91
NIP100YPL174C YPQ2Q06328 317 aa3.12□□□□□ -1.91
NIP100YPL174C RRN6P32786 894 aa3.12□□□□□ -1.91
NIP100YPL174C RGP1P16664 663 aa3.11□□□□□ -1.91
NIP100YPL174C ISC10P32645 267 aa3.11□□□□□ -1.91
NIP100YPL174C KAP122P32767 1081 aa3.11□□□□□ -1.91
NIP100YPL174C YBR287WP38355 427 aa3.11□□□□□ -1.91
NIP100YPL174C QDR2P40474 542 aa3.11□□□□□ -1.91
NIP100YPL174C MET1P36150 593 aa3.11□□□□□ -1.91
NIP100YPL174C FIR1P40020 876 aa3.11□□□□□ -1.91
NIP100YPL174C YNL165WP53891 406 aa3.11□□□□□ -1.91
NIP100YPL174C YDR461C-AQ2V2P7 80 aa3.11□□□□□ -1.91
NIP100YPL174C UBP1P25037 809 aa3.1□□□□□ -1.91
NIP100YPL174C NGR1P32831 672 aaKnown RBP3.1□□□□□ -1.91
NIP100YPL174C LDH1P38139 375 aa3.1□□□□□ -1.91
NIP100YPL174C PUF6Q04373 656 aaKnown RBP3.1□□□□□ -1.91
NIP100YPL174C SYT1Q06836 1226 aa3.1□□□□□ -1.91
NIP100YPL174C PHM7Q12252 991 aa3.1□□□□□ -1.91
NIP100YPL174C LEU1P07264 779 aaKnown RBP3.1□□□□□ -1.91
NIP100YPL174C BOI2P39969 1040 aa3.1□□□□□ -1.91
NIP100YPL174C ALD4P46367 519 aaKnown RBP3.1□□□□□ -1.91
NIP100YPL174C FUR4P05316 633 aaKnown RBP3.09□□□□□ -1.91
NIP100YPL174C DYS1P38791 387 aa3.09□□□□□ -1.91
NIP100YPL174C SRS2P12954 1174 aa3.09□□□□□ -1.91
NIP100YPL174C SUT1P53032 299 aaKnown RBP3.09□□□□□ -1.91
NIP100YPL174C CUS1Q02554 436 aaPredicted RBP3.08□□□□□ -1.92
NIP100YPL174C PNP1Q05788 311 aa3.08□□□□□ -1.92
NIP100YPL174C UTP4Q06679 776 aaKnown RBP3.08□□□□□ -1.92
NIP100YPL174C RPS31P05759 152 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms