RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	YML083C	Q04526	418 aa		7.65	□□□□□ -1.18
HIM1	YDR317W	YLR346C	Q06139	101 aa		7.65	□□□□□ -1.18
HIM1	YDR317W	TSC13	Q99190	310 aa		7.65	□□□□□ -1.18
HIM1	YDR317W	GAL2	P13181	574 aa		7.64	□□□□□ -1.19
HIM1	YDR317W	PHO87	P25360	923 aa		7.64	□□□□□ -1.19
HIM1	YDR317W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.64	□□□□□ -1.19	not detected
HIM1	YDR317W	SIS2	P36024	562 aa		7.64	□□□□□ -1.19
HIM1	YDR317W	SUM1	P46676	1062 aa		7.64	□□□□□ -1.19
HIM1	YDR317W	YPL062W	Q02781	134 aa		7.64	□□□□□ -1.19
HIM1	YDR317W	RPP2B	P02400	110 aa	Known RBP	7.63	□□□□□ -1.19
HIM1	YDR317W	ROM1	P53046	1155 aa		7.63	□□□□□ -1.19
HIM1	YDR317W	CDC19	P00549	500 aa	Known RBP	7.62	□□□□□ -1.19
HIM1	YDR317W	YIR007W	P40566	764 aa		7.62	□□□□□ -1.19
HIM1	YDR317W	UBP2	Q01476	1272 aa		7.62	□□□□□ -1.19
HIM1	YDR317W	YPQ2	Q06328	317 aa		7.62	□□□□□ -1.19
HIM1	YDR317W	NOB1	Q08444	459 aa	Known RBP	7.62	□□□□□ -1.19
HIM1	YDR317W	SLA1	P32790	1244 aa		7.61	□□□□□ -1.19
HIM1	YDR317W	SHM1	P37292	490 aa	Predicted RBP	7.61	□□□□□ -1.19
HIM1	YDR317W	OSH7	P38755	437 aa		7.6	□□□□□ -1.19
HIM1	YDR317W	ACO2	P39533	789 aa		7.6	□□□□□ -1.19
HIM1	YDR317W	NAM8	Q00539	523 aa	Known RBP	7.6	□□□□□ -1.19
HIM1	YDR317W	DAL1	P32375	460 aa		7.59	□□□□□ -1.19
HIM1	YDR317W	YFL034W	P43564	1073 aa		7.59	□□□□□ -1.19
HIM1	YDR317W	VTC4	P47075	721 aa		7.59	□□□□□ -1.19
HIM1	YDR317W	CYT1	P07143	309 aa		7.58	□□□□□ -1.2
HIM1	YDR317W	UBX7	P38349	436 aa		7.58	□□□□□ -1.2
HIM1	YDR317W	MSN5	P52918	1224 aa		7.58	□□□□□ -1.2
HIM1	YDR317W	HAP4	P14064	554 aa		7.57	□□□□□ -1.2
HIM1	YDR317W	SSA4	P22202	642 aa	Known RBP	7.57	□□□□□ -1.2
HIM1	YDR317W	ALA1	P40825	983 aa	Known RBP	7.57	□□□□□ -1.2
HIM1	YDR317W	ROG3	P43602	733 aa		7.57	□□□□□ -1.2
HIM1	YDR317W	JJJ2	P46997	583 aa		7.57	□□□□□ -1.2
HIM1	YDR317W	YNL165W	P53891	406 aa		7.57	□□□□□ -1.2
HIM1	YDR317W	CCP1	P00431	361 aa		7.56	□□□□□ -1.2
HIM1	YDR317W	SUB2	Q07478	446 aa	Known RBP	7.56	□□□□□ -1.2
HIM1	YDR317W	GAS4	Q08271	471 aa		7.56	□□□□□ -1.2
HIM1	YDR317W	TY1A-MR1	Q04215	440 aa		7.55	□□□□□ -1.2
HIM1	YDR317W	RPS31	P05759	152 aa	Known RBP	7.54	□□□□□ -1.2
HIM1	YDR317W	SUV3	P32580	737 aa		7.53	□□□□□ -1.2
HIM1	YDR317W	AHP1	P38013	176 aa	Known RBP	7.53	□□□□□ -1.2
HIM1	YDR317W	UBP1	P25037	809 aa		7.51	□□□□□ -1.21
HIM1	YDR317W	IRE1	P32361	1115 aa		7.51	□□□□□ -1.21
HIM1	YDR317W	PSH1	Q12161	406 aa		7.51	□□□□□ -1.21
HIM1	YDR317W	MCM1	P11746	286 aa		7.49	□□□□□ -1.21
HIM1	YDR317W	PDC6	P26263	563 aa	Known RBP	7.49	□□□□□ -1.21
HIM1	YDR317W	MLF3	P32047	452 aa		7.49	□□□□□ -1.21
HIM1	YDR317W	UBP15	P50101	1230 aa		7.49	□□□□□ -1.21
HIM1	YDR317W	TPS3	P38426	1054 aa	Known RBP	7.48	□□□□□ -1.21
HIM1	YDR317W	VAN1	P23642	535 aa		7.47	□□□□□ -1.21
HIM1	YDR317W	NGR1	P32831	672 aa	Known RBP	7.47	□□□□□ -1.21
HIM1	YDR317W	HXT5	P38695	592 aa		7.47	□□□□□ -1.21
HIM1	YDR317W	CUZ1	P53899	274 aa		7.47	□□□□□ -1.21
HIM1	YDR317W	Q0182	Q9ZZW1	134 aa		7.47	□□□□□ -1.21
HIM1	YDR317W	ALD2	P47771	506 aa		7.46	□□□□□ -1.22
HIM1	YDR317W	TAF7	Q05021	590 aa		7.46	□□□□□ -1.22
HIM1	YDR317W	HPF1	Q05164	967 aa		7.45	□□□□□ -1.22
HIM1	YDR317W	CAB1	Q04430	367 aa		7.44	□□□□□ -1.22
HIM1	YDR317W	FOX2	Q02207	900 aa	Known RBP	7.43	□□□□□ -1.22
HIM1	YDR317W	TRS33	Q99394	268 aa		7.43	□□□□□ -1.22
HIM1	YDR317W	ALD4	P46367	519 aa	Known RBP	7.42	□□□□□ -1.22
HIM1	YDR317W	LEU1	P07264	779 aa	Known RBP	7.41	□□□□□ -1.22
HIM1	YDR317W	CWC15	Q03772	175 aa	Known RBP	7.41	□□□□□ -1.22
HIM1	YDR317W	PUN1	Q06991	263 aa		7.41	□□□□□ -1.22
HIM1	YDR317W	MRPL16	P38064	232 aa		7.4	□□□□□ -1.22
HIM1	YDR317W	STB3	Q12427	513 aa		7.4	□□□□□ -1.22
HIM1	YDR317W	DIT1	P21623	536 aa		7.39	□□□□□ -1.23
HIM1	YDR317W	YBR197C	P38306	217 aa		7.39	□□□□□ -1.23
HIM1	YDR317W	YGR035C	P53222	116 aa		7.39	□□□□□ -1.23
HIM1	YDR317W	YMR265C	Q03508	461 aa	Known RBP	7.39	□□□□□ -1.23
HIM1	YDR317W	PUF6	Q04373	656 aa	Known RBP	7.38	□□□□□ -1.23
HIM1	YDR317W	SCD5	P34758	872 aa		7.37	□□□□□ -1.23
HIM1	YDR317W	MTO1	P53070	669 aa		7.37	□□□□□ -1.23
HIM1	YDR317W	KRE33	P53914	1056 aa	Known RBP	7.37	□□□□□ -1.23
HIM1	YDR317W	ISC10	P32645	267 aa		7.36	□□□□□ -1.23
HIM1	YDR317W	YTA6	P40328	754 aa		7.36	□□□□□ -1.23
HIM1	YDR317W	CWH41	P53008	833 aa		7.36	□□□□□ -1.23
HIM1	YDR317W	SSA1	P10591	642 aa	Known RBP	7.35	□□□□□ -1.23
HIM1	YDR317W	SRS2	P12954	1174 aa		7.35	□□□□□ -1.23
HIM1	YDR317W	RGP1	P16664	663 aa		7.35	□□□□□ -1.23
HIM1	YDR317W	CEM1	P39525	442 aa		7.35	□□□□□ -1.23
HIM1	YDR317W	SPR3	P41901	512 aa		7.35	□□□□□ -1.23
HIM1	YDR317W	ADE12	P80210	433 aa	Known RBP	7.35	□□□□□ -1.23
HIM1	YDR317W	PNP1	Q05788	311 aa		7.35	□□□□□ -1.23
HIM1	YDR317W	SYT1	Q06836	1226 aa		7.35	□□□□□ -1.23
HIM1	YDR317W	BOI1	P38041	980 aa	Known RBP	7.34	□□□□□ -1.23
HIM1	YDR317W	QDR2	P40474	542 aa		7.34	□□□□□ -1.23
HIM1	YDR317W	JJJ3	P47138	172 aa		7.34	□□□□□ -1.23
HIM1	YDR317W	UTP4	Q06679	776 aa	Known RBP	7.34	□□□□□ -1.23
HIM1	YDR317W	MRPL33	P20084	86 aa		7.33	□□□□□ -1.24
HIM1	YDR317W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.33	□□□□□ -1.24	not detected
HIM1	YDR317W	BOL3	P39724	118 aa		7.33	□□□□□ -1.24
HIM1	YDR317W	VMA3	P25515	160 aa		7.32	□□□□□ -1.24
HIM1	YDR317W	KTR2	P33550	425 aa		7.31	□□□□□ -1.24
HIM1	YDR317W	LYS5	P50113	272 aa		7.31	□□□□□ -1.24
HIM1	YDR317W	YDR461C-A	Q2V2P7	80 aa		7.31	□□□□□ -1.24
HIM1	YDR317W	RPC31	P17890	251 aa		7.3	□□□□□ -1.24
HIM1	YDR317W	TRK2	P28584	889 aa		7.3	□□□□□ -1.24
HIM1	YDR317W	KAP122	P32767	1081 aa		7.3	□□□□□ -1.24
HIM1	YDR317W	MSC7	P38694	644 aa		7.3	□□□□□ -1.24
HIM1	YDR317W	RPL34A	P87262	121 aa	Predicted RBP	7.3	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 135.7 ms