RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
CASC19-278ENST00000642088 ANKRD13DQ6ZTN6 518 aa7.52□□□□□ -1.21
CASC19-278ENST00000642088 RBM46Q8TBY0 533 aaKnown RBP7.51□□□□□ -1.21
CASC19-278ENST00000642088 BEGAINQ9BUH8 593 aa7.51□□□□□ -1.21
CASC19-278ENST00000642088 RNF166Q96A37 237 aaPredicted RBP7.51□□□□□ -1.21
CASC19-278ENST00000642088 MYT1LQ9UL68 1186 aa7.51□□□□□ -1.21
CASC19-278ENST00000642088 TMEM134Q9H6X4 195 aa7.5□□□□□ -1.21
CASC19-278ENST00000642088 NACADO15069 1562 aa7.5□□□□□ -1.21
CASC19-278ENST00000642088 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
CASC19-278ENST00000642088 PACS2Q86VP3 889 aa7.49□□□□□ -1.21
CASC19-278ENST00000642088 SLC4A5Q9BY07 1137 aa7.49□□□□□ -1.21
CASC19-278ENST00000642088 RABGEF1Q9UJ41 708 aa7.48□□□□□ -1.21
CASC19-278ENST00000642088 DDX11L8A8MPP1 907 aa7.48□□□□□ -1.21
CASC19-278ENST00000642088 BHMG1C9JSJ3 638 aaPredicted RBP7.48□□□□□ -1.21
CASC19-278ENST00000642088 SLC10A3P09131 477 aa7.48□□□□□ -1.21
CASC19-278ENST00000642088 PROCA1Q8NCQ7 364 aaPredicted RBP7.48□□□□□ -1.21
CASC19-278ENST00000642088 DDRGK1Q96HY6 314 aa7.48□□□□□ -1.21
CASC19-278ENST00000642088 SWT1Q5T5J6 900 aaKnown RBP7.47□□□□□ -1.21
CASC19-278ENST00000642088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
CASC19-278ENST00000642088 DNAJB2P25686 324 aa7.47□□□□□ -1.21
CASC19-278ENST00000642088 HLA-CQ95604 372 aa7.47□□□□□ -1.21
CASC19-278ENST00000642088 POLR3EQ9NVU0 708 aa7.47□□□□□ -1.21
CASC19-278ENST00000642088 DAXXQ9UER7 740 aaPredicted RBP7.47□□□□□ -1.21
CASC19-278ENST00000642088 TK2O00142 265 aa7.46□□□□□ -1.22
CASC19-278ENST00000642088 HRO43593 1189 aa7.46□□□□□ -1.22
CASC19-278ENST00000642088 ADGRD1Q6QNK2 874 aa7.46□□□□□ -1.22
CASC19-278ENST00000642088 CD46P15529 392 aa7.45□□□□□ -1.22
CASC19-278ENST00000642088 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
CASC19-278ENST00000642088 SAMD7Q7Z3H4 446 aa7.45□□□□□ -1.22
CASC19-278ENST00000642088 KCNH8Q96L42 1107 aa7.45□□□□□ -1.22
CASC19-278ENST00000642088 TBC1D2Q9BYX2 928 aa7.43□□□□□ -1.22
CASC19-278ENST00000642088 LIMD1Q9UGP4 676 aa7.43□□□□□ -1.22
CASC19-278ENST00000642088 SPIRE2Q8WWL2 714 aa7.43□□□□□ -1.22
CASC19-278ENST00000642088 NDUFV2P19404 249 aa7.42□□□□□ -1.22
CASC19-278ENST00000642088 GUCA2AQ02747 115 aa7.42□□□□□ -1.22
CASC19-278ENST00000642088 FAM98CQ17RN3 349 aaKnown RBP7.42□□□□□ -1.22
CASC19-278ENST00000642088 ZFRQ96KR1 1074 aaKnown RBP7.42□□□□□ -1.22
CASC19-278ENST00000642088 ABCC9O60706 1549 aa7.41□□□□□ -1.22
CASC19-278ENST00000642088 RB1CC1Q8TDY2 1594 aa7.41□□□□□ -1.22
CASC19-278ENST00000642088 MOXD2PA6NHM9 499 aa7.4□□□□□ -1.22
CASC19-278ENST00000642088 SH3D19Q5HYK7 790 aa7.4□□□□□ -1.22
CASC19-278ENST00000642088 RDH13Q8NBN7 331 aa7.4□□□□□ -1.22
CASC19-278ENST00000642088 SUPT5HO00267 1087 aaKnown RBP7.4□□□□□ -1.23
CASC19-278ENST00000642088 PCDHB15Q9Y5E8 787 aa7.4□□□□□ -1.23
CASC19-278ENST00000642088 SCRIBQ14160 1630 aa7.4□□□□□ -1.23
CASC19-278ENST00000642088 RNF40O75150 1001 aa7.39□□□□□ -1.23
CASC19-278ENST00000642088 QPCTQ16769 361 aa7.39□□□□□ -1.23
CASC19-278ENST00000642088 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.39□□□□□ -1.23
CASC19-278ENST00000642088 BCAMP50895 628 aa7.38□□□□□ -1.23
CASC19-278ENST00000642088 CSPP1Q1MSJ5 1256 aa7.38□□□□□ -1.23
CASC19-278ENST00000642088 SKIV2LQ15477 1246 aaKnown RBP7.37□□□□□ -1.23
CASC19-278ENST00000642088 MRPL50Q8N5N7 158 aaKnown RBP7.37□□□□□ -1.23
CASC19-278ENST00000642088 PCDHGC3Q9UN70 934 aa7.37□□□□□ -1.23
CASC19-278ENST00000642088 GCGRP47871 477 aa7.37□□□□□ -1.23
CASC19-278ENST00000642088 GOPCQ9HD26 462 aa7.37□□□□□ -1.23
CASC19-278ENST00000642088 FUT2Q10981 343 aa7.36□□□□□ -1.23
CASC19-278ENST00000642088 CLK2P49760 499 aaKnown RBP7.36□□□□□ -1.23
CASC19-278ENST00000642088 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
CASC19-278ENST00000642088 NBPF3Q9H094 633 aa7.36□□□□□ -1.23
CASC19-278ENST00000642088 KDM4AO75164 1064 aa7.35□□□□□ -1.23
CASC19-278ENST00000642088 CFHP08603 1231 aa7.35□□□□□ -1.23
CASC19-278ENST00000642088 RSBN1LQ6PCB5 846 aaPredicted RBP7.35□□□□□ -1.23
CASC19-278ENST00000642088 RIC3Q7Z5B4 369 aa7.35□□□□□ -1.23
CASC19-278ENST00000642088 CABLES1Q8TDN4 633 aa7.35□□□□□ -1.23
CASC19-278ENST00000642088 HOXA2O43364 376 aa7.34□□□□□ -1.23
CASC19-278ENST00000642088 PUS10Q3MIT2 529 aaKnown RBP7.34□□□□□ -1.23
CASC19-278ENST00000642088 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
CASC19-278ENST00000642088 PCMTD1Q96MG8 357 aaPredicted RBP7.34□□□□□ -1.23
CASC19-278ENST00000642088 RTL5Q5HYW3 569 aaPredicted RBP7.33□□□□□ -1.24
CASC19-278ENST00000642088 C14orf37Q86TY3 774 aa7.33□□□□□ -1.24
CASC19-278ENST00000642088 LAPTM4BQ86VI4 370 aa7.33□□□□□ -1.24
CASC19-278ENST00000642088 NUTM1Q86Y26 1132 aa7.32□□□□□ -1.24
CASC19-278ENST00000642088 SPTLC1O15269 473 aa7.32□□□□□ -1.24
CASC19-278ENST00000642088 APLP1P51693 650 aa7.32□□□□□ -1.24
CASC19-278ENST00000642088 RSPH6AQ9H0K4 717 aa7.32□□□□□ -1.24
CASC19-278ENST00000642088 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
CASC19-278ENST00000642088 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.31□□□□□ -1.24
CASC19-278ENST00000642088 ATP1B4Q9UN42 357 aaPredicted RBP7.31□□□□□ -1.24
CASC19-278ENST00000642088 LRCH3Q96II8 777 aa7.31□□□□□ -1.24
CASC19-278ENST00000642088 WBP1LQ9NX94 342 aa7.31□□□□□ -1.24
CASC19-278ENST00000642088 SOWAHBA6NEL2 793 aa7.3□□□□□ -1.24
CASC19-278ENST00000642088 WNT2BQ93097 391 aa7.3□□□□□ -1.24
CASC19-278ENST00000642088 SNRKQ9NRH2 765 aa7.3□□□□□ -1.24
CASC19-278ENST00000642088 RFC5P40937 340 aa7.29□□□□□ -1.24
CASC19-278ENST00000642088 SLF2Q8IX21 1173 aa7.29□□□□□ -1.24
CASC19-278ENST00000642088 HPS5Q9UPZ3 1129 aa7.29□□□□□ -1.24
CASC19-278ENST00000642088 HRCP23327 699 aa7.29□□□□□ -1.24
CASC19-278ENST00000642088 POM121Q96HA1 1249 aa7.29□□□□□ -1.24
CASC19-278ENST00000642088 LILRB3O75022 631 aa7.28□□□□□ -1.24
CASC19-278ENST00000642088 MCM6Q14566 821 aa7.28□□□□□ -1.24
CASC19-278ENST00000642088 CLUAP1Q96AJ1 413 aa7.28□□□□□ -1.24
CASC19-278ENST00000642088 KCTD12Q96CX2 325 aaKnown RBP7.28□□□□□ -1.24
CASC19-278ENST00000642088 FDX1P10109 184 aa7.28□□□□□ -1.24
CASC19-278ENST00000642088 SLC27A5Q9Y2P5 690 aa7.28□□□□□ -1.24
CASC19-278ENST00000642088 HCSTQ9UBK5 93 aa7.27□□□□□ -1.25
CASC19-278ENST00000642088 CFAP99D6REC4 459 aa7.26□□□□□ -1.25
CASC19-278ENST00000642088 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
CASC19-278ENST00000642088 BLOC1S3Q6QNY0 202 aa7.26□□□□□ -1.25
CASC19-278ENST00000642088 RNF19BQ6ZMZ0 732 aa7.26□□□□□ -1.25
CASC19-278ENST00000642088 ANKK1Q8NFD2 765 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms