RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 ANKK1Q8NFD2 765 aa11.96□□□□□ -0.5
CASC19-261ENST00000641853 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
CASC19-261ENST00000641853 PDE4DQ08499 809 aa11.94□□□□□ -0.5
CASC19-261ENST00000641853 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
CASC19-261ENST00000641853 THSD4Q6ZMP0 1018 aa11.93□□□□□ -0.5
CASC19-261ENST00000641853 RNF166Q96A37 237 aaPredicted RBP11.93□□□□□ -0.5
CASC19-261ENST00000641853 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
CASC19-261ENST00000641853 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.93□□□□□ -0.5
CASC19-261ENST00000641853 PARP9Q8IXQ6 854 aa11.92□□□□□ -0.5
CASC19-261ENST00000641853 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
CASC19-261ENST00000641853 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
CASC19-261ENST00000641853 CLCN1P35523 988 aa11.89□□□□□ -0.51
CASC19-261ENST00000641853 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
CASC19-261ENST00000641853 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
CASC19-261ENST00000641853 RNF40O75150 1001 aa11.88□□□□□ -0.51
CASC19-261ENST00000641853 SLC10A3P09131 477 aa11.88□□□□□ -0.51
CASC19-261ENST00000641853 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
CASC19-261ENST00000641853 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
CASC19-261ENST00000641853 GPBP1L1Q9HC44 474 aaPredicted RBP11.87□□□□□ -0.51
CASC19-261ENST00000641853 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
CASC19-261ENST00000641853 SLF2Q8IX21 1173 aa11.86□□□□□ -0.51
CASC19-261ENST00000641853 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
CASC19-261ENST00000641853 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
CASC19-261ENST00000641853 PTPN5P54829 565 aa11.85□□□□□ -0.51
CASC19-261ENST00000641853 TSR3Q9UJK0 312 aaKnown RBP11.85□□□□□ -0.51
CASC19-261ENST00000641853 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
CASC19-261ENST00000641853 MS4A1P11836 297 aa11.82□□□□□ -0.52
CASC19-261ENST00000641853 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
CASC19-261ENST00000641853 PPP4CP60510 307 aa11.82□□□□□ -0.52
CASC19-261ENST00000641853 CD46P15529 392 aa11.81□□□□□ -0.52
CASC19-261ENST00000641853 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
CASC19-261ENST00000641853 RDH13Q8NBN7 331 aa11.8□□□□□ -0.52
CASC19-261ENST00000641853 KDM4CQ9H3R0 1056 aa11.8□□□□□ -0.52
CASC19-261ENST00000641853 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
CASC19-261ENST00000641853 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
CASC19-261ENST00000641853 APLP1P51693 650 aa11.78□□□□□ -0.52
CASC19-261ENST00000641853 CFHP08603 1231 aa11.78□□□□□ -0.52
CASC19-261ENST00000641853 PLSCR2Q9NRY7 297 aa11.78□□□□□ -0.52
CASC19-261ENST00000641853 HCSTQ9UBK5 93 aa11.78□□□□□ -0.52
CASC19-261ENST00000641853 GCGRP47871 477 aa11.76□□□□□ -0.53
CASC19-261ENST00000641853 BEGAINQ9BUH8 593 aa11.75□□□□□ -0.53
CASC19-261ENST00000641853 RSPH4AQ5TD94 716 aa11.74□□□□□ -0.53
CASC19-261ENST00000641853 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
CASC19-261ENST00000641853 FAM117AQ9C073 453 aa11.73□□□□□ -0.53
CASC19-261ENST00000641853 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
CASC19-261ENST00000641853 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
CASC19-261ENST00000641853 FUT2Q10981 343 aa11.7□□□□□ -0.54
CASC19-261ENST00000641853 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
CASC19-261ENST00000641853 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
CASC19-261ENST00000641853 KDM4AO75164 1064 aa11.68□□□□□ -0.54
CASC19-261ENST00000641853 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
CASC19-261ENST00000641853 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
CASC19-261ENST00000641853 PRR14Q9BWN1 585 aa11.67□□□□□ -0.54
CASC19-261ENST00000641853 HLA-CQ95604 372 aa11.66□□□□□ -0.54
CASC19-261ENST00000641853 TBC1D2Q9BYX2 928 aa11.65□□□□□ -0.54
CASC19-261ENST00000641853 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
CASC19-261ENST00000641853 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
CASC19-261ENST00000641853 BLOC1S3Q6QNY0 202 aa11.64□□□□□ -0.55
CASC19-261ENST00000641853 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
CASC19-261ENST00000641853 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
CASC19-261ENST00000641853 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
CASC19-261ENST00000641853 MTRQ99707 1265 aa11.64□□□□□ -0.55
CASC19-261ENST00000641853 HOXA2O43364 376 aa11.63□□□□□ -0.55
CASC19-261ENST00000641853 COPS2P61201 443 aa11.63□□□□□ -0.55
CASC19-261ENST00000641853 MORN1Q5T089 497 aa11.63□□□□□ -0.55
CASC19-261ENST00000641853 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
CASC19-261ENST00000641853 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
CASC19-261ENST00000641853 GUCA2AQ02747 115 aa11.61□□□□□ -0.55
CASC19-261ENST00000641853 USP46P62068 366 aa11.6□□□□□ -0.55
CASC19-261ENST00000641853 ZNF516Q92618 1163 aa11.6□□□□□ -0.55
CASC19-261ENST00000641853 NDUFV2P19404 249 aa11.6□□□□□ -0.55
CASC19-261ENST00000641853 MYSM1Q5VVJ2 828 aa11.6□□□□□ -0.55
CASC19-261ENST00000641853 SLC27A5Q9Y2P5 690 aa11.6□□□□□ -0.55
CASC19-261ENST00000641853 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
CASC19-261ENST00000641853 SCUBE3Q8IX30 993 aa11.58□□□□□ -0.56
CASC19-261ENST00000641853 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
CASC19-261ENST00000641853 IL21Q9HBE4 155 aa11.57□□□□□ -0.56
CASC19-261ENST00000641853 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
CASC19-261ENST00000641853 RSBN1LQ6PCB5 846 aaPredicted RBP11.56□□□□□ -0.56
CASC19-261ENST00000641853 LIMD1Q9UGP4 676 aa11.56□□□□□ -0.56
CASC19-261ENST00000641853 ZPR1O75312 459 aa11.55□□□□□ -0.56
CASC19-261ENST00000641853 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
CASC19-261ENST00000641853 POLR3EQ9NVU0 708 aa11.55□□□□□ -0.56
CASC19-261ENST00000641853 SPTLC1O15269 473 aa11.54□□□□□ -0.56
CASC19-261ENST00000641853 TLL1O43897 1013 aa11.54□□□□□ -0.56
CASC19-261ENST00000641853 NR1I2O75469 434 aa11.54□□□□□ -0.56
CASC19-261ENST00000641853 FDX1P10109 184 aa11.54□□□□□ -0.56
CASC19-261ENST00000641853 PCDHB15Q9Y5E8 787 aa11.54□□□□□ -0.56
CASC19-261ENST00000641853 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
CASC19-261ENST00000641853 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
CASC19-261ENST00000641853 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
CASC19-261ENST00000641853 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
CASC19-261ENST00000641853 RSPH6AQ9H0K4 717 aa11.53□□□□□ -0.56
CASC19-261ENST00000641853 KCNC4Q03721 635 aa11.53□□□□□ -0.56
CASC19-261ENST00000641853 RNF19BQ6ZMZ0 732 aa11.53□□□□□ -0.56
CASC19-261ENST00000641853 SYMPKQ92797 1274 aaKnown RBP11.52□□□□□ -0.57
CASC19-261ENST00000641853 BRICD5Q6PL45 260 aa11.51□□□□□ -0.57
CASC19-261ENST00000641853 GJA5P36382 358 aa11.5□□□□□ -0.57
CASC19-261ENST00000641853 CLK2P49760 499 aaKnown RBP11.5□□□□□ -0.57
CASC19-261ENST00000641853 SKIV2LQ15477 1246 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms