RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.65
AP3S1-209ENST00000640413 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.65
AP3S1-209ENST00000640413 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
AP3S1-209ENST00000640413 RBM46Q8TBY0 533 aaKnown RBP10.95□□□□□ -0.66
AP3S1-209ENST00000640413 PRR14Q9BWN1 585 aa10.95□□□□□ -0.66
AP3S1-209ENST00000640413 TMUB1Q9BVT8 246 aa10.94□□□□□ -0.66
AP3S1-209ENST00000640413 TMEM134Q9H6X4 195 aa10.94□□□□□ -0.66
AP3S1-209ENST00000640413 TLL1O43897 1013 aa10.93□□□□□ -0.66
AP3S1-209ENST00000640413 RCCD1A6NED2 376 aa10.92□□□□□ -0.66
AP3S1-209ENST00000640413 RNF223E7ERA6 249 aa10.91□□□□□ -0.66
AP3S1-209ENST00000640413 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
AP3S1-209ENST00000640413 PPEF1O14829 653 aaPredicted RBP10.88□□□□□ -0.67
AP3S1-209ENST00000640413 SEMA3EO15041 775 aa10.88□□□□□ -0.67
AP3S1-209ENST00000640413 ACTN4O43707 911 aaKnown RBP10.88□□□□□ -0.67
AP3S1-209ENST00000640413 CFHP08603 1231 aa10.88□□□□□ -0.67
AP3S1-209ENST00000640413 SLC19A1P41440 591 aa10.88□□□□□ -0.67
AP3S1-209ENST00000640413 KMT5BQ4FZB7 885 aa10.88□□□□□ -0.67
AP3S1-209ENST00000640413 SLC10A3P09131 477 aa10.87□□□□□ -0.67
AP3S1-209ENST00000640413 FCHSD2O94868 740 aa10.86□□□□□ -0.67
AP3S1-209ENST00000640413 S1PR4O95977 384 aa10.86□□□□□ -0.67
AP3S1-209ENST00000640413 TRIM67Q6ZTA4 783 aa10.86□□□□□ -0.67
AP3S1-209ENST00000640413 ZNF787Q6DD87 383 aa10.83□□□□□ -0.68
AP3S1-209ENST00000640413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
AP3S1-209ENST00000640413 SPRYD7Q5W111 196 aa10.82□□□□□ -0.68
AP3S1-209ENST00000640413 LIAT1Q6ZQX7 453 aa10.82□□□□□ -0.68
AP3S1-209ENST00000640413 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
AP3S1-209ENST00000640413 ANKLE1Q8NAG6 615 aa10.82□□□□□ -0.68
AP3S1-209ENST00000640413 PXYLP1Q8TE99 480 aa10.81□□□□□ -0.68
AP3S1-209ENST00000640413 ADH1BP00325 375 aa10.8□□□□□ -0.68
AP3S1-209ENST00000640413 ZNF598Q86UK7 904 aaKnown RBP10.8□□□□□ -0.68
AP3S1-209ENST00000640413 NR1I2O75469 434 aa10.79□□□□□ -0.68
AP3S1-209ENST00000640413 OATP04181 439 aa10.78□□□□□ -0.68
AP3S1-209ENST00000640413 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
AP3S1-209ENST00000640413 RBM26Q5T8P6 1007 aaKnown RBP10.77□□□□□ -0.69
AP3S1-209ENST00000640413 SCUBE3Q8IX30 993 aa10.77□□□□□ -0.69
AP3S1-209ENST00000640413 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
AP3S1-209ENST00000640413 ZNF697Q5TEC3 545 aa10.76□□□□□ -0.69
AP3S1-209ENST00000640413 METTL3Q86U44 580 aaKnown RBP10.76□□□□□ -0.69
AP3S1-209ENST00000640413 SLC6A16Q9GZN6 736 aa10.76□□□□□ -0.69
AP3S1-209ENST00000640413 FECHP22830 423 aa10.75□□□□□ -0.69
AP3S1-209ENST00000640413 HIC1Q14526 733 aa10.75□□□□□ -0.69
AP3S1-209ENST00000640413 PKDCCQ504Y2 493 aa10.75□□□□□ -0.69
AP3S1-209ENST00000640413 TNFRSF10AO00220 468 aa10.74□□□□□ -0.69
AP3S1-209ENST00000640413 PRR20EP86478 221 aa10.74□□□□□ -0.69
AP3S1-209ENST00000640413 PRR20CP86479 221 aa10.74□□□□□ -0.69
AP3S1-209ENST00000640413 PRR20DP86480 221 aa10.74□□□□□ -0.69
AP3S1-209ENST00000640413 PRR20BP86481 221 aa10.74□□□□□ -0.69
AP3S1-209ENST00000640413 PRR20AP86496 221 aa10.74□□□□□ -0.69
AP3S1-209ENST00000640413 MYT1Q01538 1121 aa10.73□□□□□ -0.69
AP3S1-209ENST00000640413 TESPA1A2RU30 521 aaPredicted RBP10.72□□□□□ -0.69
AP3S1-209ENST00000640413 GDF9O60383 454 aa10.72□□□□□ -0.69
AP3S1-209ENST00000640413 DGAT1O75907 488 aa10.72□□□□□ -0.69
AP3S1-209ENST00000640413 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
AP3S1-209ENST00000640413 RSPH4AQ5TD94 716 aa10.71□□□□□ -0.69
AP3S1-209ENST00000640413 ZNF775Q96BV0 537 aaPredicted RBP10.71□□□□□ -0.69
AP3S1-209ENST00000640413 SPSB2Q99619 263 aa10.71□□□□□ -0.69
AP3S1-209ENST00000640413 FAM187AA6NFU0 413 aa10.7□□□□□ -0.7
AP3S1-209ENST00000640413 RDH13Q8NBN7 331 aa10.7□□□□□ -0.7
AP3S1-209ENST00000640413 GNPATO15228 680 aa10.69□□□□□ -0.7
AP3S1-209ENST00000640413 POTECB2RU33 542 aa10.68□□□□□ -0.7
AP3S1-209ENST00000640413 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
AP3S1-209ENST00000640413 DDX11L8A8MPP1 907 aa10.67□□□□□ -0.7
AP3S1-209ENST00000640413 GPR37O15354 613 aa10.67□□□□□ -0.7
AP3S1-209ENST00000640413 FUT2Q10981 343 aa10.66□□□□□ -0.7
AP3S1-209ENST00000640413 FOXC1Q12948 553 aa10.66□□□□□ -0.7
AP3S1-209ENST00000640413 MORN1Q5T089 497 aa10.66□□□□□ -0.7
AP3S1-209ENST00000640413 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
AP3S1-209ENST00000640413 PKD2L1Q9P0L9 805 aa10.64□□□□□ -0.71
AP3S1-209ENST00000640413 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
AP3S1-209ENST00000640413 THAP11Q96EK4 314 aa10.63□□□□□ -0.71
AP3S1-209ENST00000640413 PHOX2BQ99453 314 aa10.63□□□□□ -0.71
AP3S1-209ENST00000640413 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
AP3S1-209ENST00000640413 SLC27A5Q9Y2P5 690 aa10.62□□□□□ -0.71
AP3S1-209ENST00000640413 FCF1Q9Y324 198 aaKnown RBP10.62□□□□□ -0.71
AP3S1-209ENST00000640413 FAM160A2Q8N612 972 aaPredicted RBP10.61□□□□□ -0.71
AP3S1-209ENST00000640413 GCGRP47871 477 aa10.6□□□□□ -0.71
AP3S1-209ENST00000640413 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
AP3S1-209ENST00000640413 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
AP3S1-209ENST00000640413 PRDM9Q9NQV7 894 aa10.59□□□□□ -0.71
AP3S1-209ENST00000640413 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
AP3S1-209ENST00000640413 RPIAP49247 311 aa10.58□□□□□ -0.72
AP3S1-209ENST00000640413 BRICD5Q6PL45 260 aa10.56□□□□□ -0.72
AP3S1-209ENST00000640413 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
AP3S1-209ENST00000640413 CD2BP2O95400 341 aaKnown RBP10.55□□□□□ -0.72
AP3S1-209ENST00000640413 LMOD2Q6P5Q4 547 aa10.55□□□□□ -0.72
AP3S1-209ENST00000640413 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
AP3S1-209ENST00000640413 GPIHBP1Q8IV16 184 aa10.55□□□□□ -0.72
AP3S1-209ENST00000640413 TOR4AQ9NXH8 423 aa10.54□□□□□ -0.72
AP3S1-209ENST00000640413 DACH1Q9UI36 760 aa10.54□□□□□ -0.72
AP3S1-209ENST00000640413 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
AP3S1-209ENST00000640413 CYP4X1Q8N118 509 aa10.52□□□□□ -0.73
AP3S1-209ENST00000640413 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
AP3S1-209ENST00000640413 MSS51Q4VC12 460 aa10.49□□□□□ -0.73
AP3S1-209ENST00000640413 AVPP01185 164 aa10.48□□□□□ -0.73
AP3S1-209ENST00000640413 GRIPAP1Q4V328 841 aa10.48□□□□□ -0.73
AP3S1-209ENST00000640413 AXIN1O15169 862 aa10.47□□□□□ -0.73
AP3S1-209ENST00000640413 HAP1P54257 671 aaPredicted RBP10.47□□□□□ -0.73
AP3S1-209ENST00000640413 CRIPAKQ8N1N5 446 aa10.47□□□□□ -0.73
AP3S1-209ENST00000640413 TTC24A2A3L6 582 aaPredicted RBP10.46□□□□□ -0.73
AP3S1-209ENST00000640413 CD46P15529 392 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms