RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 NAIPQ13075 1403 aa24.93■■□□□ 1.58
COLCA2-207ENST00000639470 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
COLCA2-207ENST00000639470 MYO5BQ9ULV0 1848 aa24.92■■□□□ 1.58
COLCA2-207ENST00000639470 TMEM131LA2VDJ0 1609 aa24.92■■□□□ 1.58
COLCA2-207ENST00000639470 RIMS2Q9UQ26 1411 aa24.92■■□□□ 1.58
COLCA2-207ENST00000639470 TOM1O60784 492 aa24.91■■□□□ 1.58
COLCA2-207ENST00000639470 BCANQ96GW7 911 aa24.89■■□□□ 1.58
COLCA2-207ENST00000639470 ILDR2Q71H61 639 aa24.87■■□□□ 1.57
COLCA2-207ENST00000639470 PPP1R15AO75807 674 aaPredicted RBP24.84■■□□□ 1.57
COLCA2-207ENST00000639470 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
COLCA2-207ENST00000639470 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
COLCA2-207ENST00000639470 PLEKHG1Q9ULL1 1385 aa24.83■■□□□ 1.57
COLCA2-207ENST00000639470 KCNA6P17658 529 aa24.83■■□□□ 1.57
COLCA2-207ENST00000639470 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
COLCA2-207ENST00000639470 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
COLCA2-207ENST00000639470 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
COLCA2-207ENST00000639470 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
COLCA2-207ENST00000639470 NWD1Q149M9 1564 aa24.76■■□□□ 1.55
COLCA2-207ENST00000639470 SPHKAPQ2M3C7 1700 aa24.75■■□□□ 1.55
COLCA2-207ENST00000639470 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
COLCA2-207ENST00000639470 FOXD1Q16676 465 aa24.72■■□□□ 1.55
COLCA2-207ENST00000639470 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
COLCA2-207ENST00000639470 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
COLCA2-207ENST00000639470 NKTRP30414 1462 aaKnown RBP24.7■■□□□ 1.55
COLCA2-207ENST00000639470 HDGFP51858 240 aaKnown RBP24.7■■□□□ 1.54
COLCA2-207ENST00000639470 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.54
COLCA2-207ENST00000639470 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
COLCA2-207ENST00000639470 TRPM2O94759 1503 aa24.68■■□□□ 1.54
COLCA2-207ENST00000639470 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
COLCA2-207ENST00000639470 MED1Q15648 1581 aaPredicted RBP24.67■■□□□ 1.54
COLCA2-207ENST00000639470 NRXN3Q9Y4C0 1643 aa24.65■■□□□ 1.54
COLCA2-207ENST00000639470 CHD2O14647 1828 aaKnown RBP24.65■■□□□ 1.54
COLCA2-207ENST00000639470 NEXMIFQ5QGS0 1516 aa24.62■■□□□ 1.53
COLCA2-207ENST00000639470 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
COLCA2-207ENST00000639470 METP08581 1390 aa24.61■■□□□ 1.53
COLCA2-207ENST00000639470 DIP2AQ14689 1571 aa24.6■■□□□ 1.53
COLCA2-207ENST00000639470 MSH6P52701 1360 aa24.6■■□□□ 1.53
COLCA2-207ENST00000639470 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
COLCA2-207ENST00000639470 SETBP1Q9Y6X0 1596 aa24.59■■□□□ 1.53
COLCA2-207ENST00000639470 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
COLCA2-207ENST00000639470 C14orf37Q86TY3 774 aa24.56■■□□□ 1.52
COLCA2-207ENST00000639470 SLAIN2Q9P270 581 aa24.55■■□□□ 1.52
COLCA2-207ENST00000639470 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
COLCA2-207ENST00000639470 MPHOSPH9Q99550 1183 aa24.52■■□□□ 1.52
COLCA2-207ENST00000639470 XRN1Q8IZH2 1706 aaKnown RBP24.51■■□□□ 1.51
COLCA2-207ENST00000639470 KIF1BO60333 1816 aa24.49■■□□□ 1.51
COLCA2-207ENST00000639470 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.48■■□□□ 1.51
COLCA2-207ENST00000639470 SOCS7O14512 581 aa24.47■■□□□ 1.51
COLCA2-207ENST00000639470 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
COLCA2-207ENST00000639470 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
COLCA2-207ENST00000639470 NCOA3Q9Y6Q9 1424 aa24.46■■□□□ 1.51
COLCA2-207ENST00000639470 C19orf44Q9H6X5 657 aa24.46■■□□□ 1.51
COLCA2-207ENST00000639470 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
COLCA2-207ENST00000639470 RAB3GAP2Q9H2M9 1393 aa24.43■■□□□ 1.5
COLCA2-207ENST00000639470 ADGRF5Q8IZF2 1346 aa24.43■■□□□ 1.5
COLCA2-207ENST00000639470 ATF3P18847 181 aa24.43■■□□□ 1.5
COLCA2-207ENST00000639470 RGS17Q9UGC6 210 aaPredicted RBP24.43■■□□□ 1.5
COLCA2-207ENST00000639470 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
COLCA2-207ENST00000639470 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
COLCA2-207ENST00000639470 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
COLCA2-207ENST00000639470 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
COLCA2-207ENST00000639470 CADPS2Q86UW7 1296 aa24.41■■□□□ 1.5
COLCA2-207ENST00000639470 ROBO2Q9HCK4 1378 aa24.41■■□□□ 1.5
COLCA2-207ENST00000639470 PPLO60437 1756 aa24.39■■□□□ 1.5
COLCA2-207ENST00000639470 PHLPP1O60346 1717 aa24.39■■□□□ 1.5
COLCA2-207ENST00000639470 BRINP3Q76B58 766 aa24.39■■□□□ 1.49
COLCA2-207ENST00000639470 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
COLCA2-207ENST00000639470 MST1RQ04912 1400 aa24.37■■□□□ 1.49
COLCA2-207ENST00000639470 COL16A1Q07092 1604 aaPredicted RBP24.37■■□□□ 1.49
COLCA2-207ENST00000639470 DDX17Q92841 729 aaKnown RBP24.37■■□□□ 1.49
COLCA2-207ENST00000639470 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
COLCA2-207ENST00000639470 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
COLCA2-207ENST00000639470 DCCP43146 1447 aa24.33■■□□□ 1.49
COLCA2-207ENST00000639470 ASXL1Q8IXJ9 1541 aa24.31■■□□□ 1.48
COLCA2-207ENST00000639470 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
COLCA2-207ENST00000639470 TMEM132EQ6IEE7 984 aa24.31■■□□□ 1.48
COLCA2-207ENST00000639470 AHDC1Q5TGY3 1603 aaPredicted RBP24.31■■□□□ 1.48
COLCA2-207ENST00000639470 JCADQ9P266 1359 aa24.3■■□□□ 1.48
COLCA2-207ENST00000639470 STK26Q9P289 416 aa24.3■■□□□ 1.48
COLCA2-207ENST00000639470 LRP6O75581 1613 aa24.3■■□□□ 1.48
COLCA2-207ENST00000639470 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
COLCA2-207ENST00000639470 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
COLCA2-207ENST00000639470 ANKRD30BQ9BXX2 1392 aa24.26■■□□□ 1.47
COLCA2-207ENST00000639470 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
COLCA2-207ENST00000639470 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
COLCA2-207ENST00000639470 PIK3C2GO75747 1445 aa24.25■■□□□ 1.47
COLCA2-207ENST00000639470 C1orf167Q5SNV9 1468 aa24.25■■□□□ 1.47
COLCA2-207ENST00000639470 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
COLCA2-207ENST00000639470 PRAG1Q86YV5 1406 aa24.24■■□□□ 1.47
COLCA2-207ENST00000639470 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-207ENST00000639470 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-207ENST00000639470 CFAP70Q5T0N1 1121 aa24.2■■□□□ 1.46
COLCA2-207ENST00000639470 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-207ENST00000639470 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
COLCA2-207ENST00000639470 NHSL1Q5SYE7 1610 aa24.18■■□□□ 1.46
COLCA2-207ENST00000639470 NUTM2FA1L443 756 aa24.18■■□□□ 1.46
COLCA2-207ENST00000639470 NRXN1Q9ULB1 1477 aa24.16■■□□□ 1.46
COLCA2-207ENST00000639470 TECPR2O15040 1411 aa24.16■■□□□ 1.46
COLCA2-207ENST00000639470 SPATA31A6Q5VVP1 1343 aa24.15■■□□□ 1.46
COLCA2-207ENST00000639470 SHPRHQ149N8 1683 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms