RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 TK2O00142 265 aa12.85□□□□□ -0.35
FAM49B-230ENST00000639004 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
FAM49B-230ENST00000639004 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
FAM49B-230ENST00000639004 CD46P15529 392 aa12.84□□□□□ -0.35
FAM49B-230ENST00000639004 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
FAM49B-230ENST00000639004 SULF1Q8IWU6 871 aa12.84□□□□□ -0.35
FAM49B-230ENST00000639004 BHMG1C9JSJ3 638 aaPredicted RBP12.83□□□□□ -0.36
FAM49B-230ENST00000639004 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
FAM49B-230ENST00000639004 SH3D19Q5HYK7 790 aa12.82□□□□□ -0.36
FAM49B-230ENST00000639004 SWT1Q5T5J6 900 aaKnown RBP12.81□□□□□ -0.36
FAM49B-230ENST00000639004 ADGRD1Q6QNK2 874 aa12.81□□□□□ -0.36
FAM49B-230ENST00000639004 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
FAM49B-230ENST00000639004 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
FAM49B-230ENST00000639004 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
FAM49B-230ENST00000639004 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
FAM49B-230ENST00000639004 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
FAM49B-230ENST00000639004 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
FAM49B-230ENST00000639004 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
FAM49B-230ENST00000639004 HRO43593 1189 aa12.76□□□□□ -0.37
FAM49B-230ENST00000639004 RDH13Q8NBN7 331 aa12.76□□□□□ -0.37
FAM49B-230ENST00000639004 TIMELESSQ9UNS1 1208 aa12.76□□□□□ -0.37
FAM49B-230ENST00000639004 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
FAM49B-230ENST00000639004 MRPL50Q8N5N7 158 aaKnown RBP12.75□□□□□ -0.37
FAM49B-230ENST00000639004 SPIRE2Q8WWL2 714 aa12.75□□□□□ -0.37
FAM49B-230ENST00000639004 SLC10A3P09131 477 aa12.74□□□□□ -0.37
FAM49B-230ENST00000639004 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
FAM49B-230ENST00000639004 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
FAM49B-230ENST00000639004 ZFRQ96KR1 1074 aaKnown RBP12.74□□□□□ -0.37
FAM49B-230ENST00000639004 ANKRD13DQ6ZTN6 518 aa12.73□□□□□ -0.37
FAM49B-230ENST00000639004 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
FAM49B-230ENST00000639004 GCGRP47871 477 aa12.71□□□□□ -0.37
FAM49B-230ENST00000639004 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
FAM49B-230ENST00000639004 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
FAM49B-230ENST00000639004 SLF2Q8IX21 1173 aa12.71□□□□□ -0.37
FAM49B-230ENST00000639004 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
FAM49B-230ENST00000639004 CLK2P49760 499 aaKnown RBP12.7□□□□□ -0.38
FAM49B-230ENST00000639004 KRTAP3-3Q9BYR6 98 aa12.7□□□□□ -0.38
FAM49B-230ENST00000639004 KRTAP3-2Q9BYR7 98 aa12.7□□□□□ -0.38
FAM49B-230ENST00000639004 SLC4A3P48751 1232 aa12.68□□□□□ -0.38
FAM49B-230ENST00000639004 KDM4AO75164 1064 aa12.67□□□□□ -0.38
FAM49B-230ENST00000639004 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
FAM49B-230ENST00000639004 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
FAM49B-230ENST00000639004 LIMD1Q9UGP4 676 aa12.67□□□□□ -0.38
FAM49B-230ENST00000639004 MOXD2PA6NHM9 499 aa12.66□□□□□ -0.38
FAM49B-230ENST00000639004 RNF40O75150 1001 aa12.66□□□□□ -0.38
FAM49B-230ENST00000639004 RIC3Q7Z5B4 369 aa12.66□□□□□ -0.38
FAM49B-230ENST00000639004 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
FAM49B-230ENST00000639004 SPTLC1O15269 473 aa12.65□□□□□ -0.38
FAM49B-230ENST00000639004 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
FAM49B-230ENST00000639004 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
FAM49B-230ENST00000639004 STAC3Q96MF2 364 aa12.65□□□□□ -0.38
FAM49B-230ENST00000639004 NDUFV2P19404 249 aa12.64□□□□□ -0.39
FAM49B-230ENST00000639004 USP46P62068 366 aa12.64□□□□□ -0.39
FAM49B-230ENST00000639004 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.64□□□□□ -0.39
FAM49B-230ENST00000639004 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
FAM49B-230ENST00000639004 CFHP08603 1231 aa12.63□□□□□ -0.39
FAM49B-230ENST00000639004 GOLGA8CPA6NN73 597 aa12.62□□□□□ -0.39
FAM49B-230ENST00000639004 HOXA2O43364 376 aa12.62□□□□□ -0.39
FAM49B-230ENST00000639004 TUSC1Q2TAM9 212 aa12.62□□□□□ -0.39
FAM49B-230ENST00000639004 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
FAM49B-230ENST00000639004 GJA5P36382 358 aa12.61□□□□□ -0.39
FAM49B-230ENST00000639004 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
FAM49B-230ENST00000639004 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
FAM49B-230ENST00000639004 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
FAM49B-230ENST00000639004 SPNS2Q8IVW8 549 aa12.59□□□□□ -0.39
FAM49B-230ENST00000639004 BCAMP50895 628 aa12.58□□□□□ -0.4
FAM49B-230ENST00000639004 FUT2Q10981 343 aa12.58□□□□□ -0.4
FAM49B-230ENST00000639004 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
FAM49B-230ENST00000639004 HLA-CQ95604 372 aa12.58□□□□□ -0.4
FAM49B-230ENST00000639004 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
FAM49B-230ENST00000639004 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
FAM49B-230ENST00000639004 KMT5BQ4FZB7 885 aa12.57□□□□□ -0.4
FAM49B-230ENST00000639004 WNT2BQ93097 391 aa12.57□□□□□ -0.4
FAM49B-230ENST00000639004 FDX1P10109 184 aa12.56□□□□□ -0.4
FAM49B-230ENST00000639004 GUCA2AQ02747 115 aa12.56□□□□□ -0.4
FAM49B-230ENST00000639004 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
FAM49B-230ENST00000639004 RFC5P40937 340 aa12.55□□□□□ -0.4
FAM49B-230ENST00000639004 QPCTQ16769 361 aa12.55□□□□□ -0.4
FAM49B-230ENST00000639004 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
FAM49B-230ENST00000639004 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
FAM49B-230ENST00000639004 LILRB3O75022 631 aa12.54□□□□□ -0.4
FAM49B-230ENST00000639004 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
FAM49B-230ENST00000639004 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
FAM49B-230ENST00000639004 PPP4CP60510 307 aa12.53□□□□□ -0.4
FAM49B-230ENST00000639004 FLIIQ13045 1269 aa12.53□□□□□ -0.4
FAM49B-230ENST00000639004 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
FAM49B-230ENST00000639004 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
FAM49B-230ENST00000639004 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.41
FAM49B-230ENST00000639004 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
FAM49B-230ENST00000639004 RTL5Q5HYW3 569 aaPredicted RBP12.5□□□□□ -0.41
FAM49B-230ENST00000639004 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
FAM49B-230ENST00000639004 HRCP23327 699 aa12.49□□□□□ -0.41
FAM49B-230ENST00000639004 APLP1P51693 650 aa12.49□□□□□ -0.41
FAM49B-230ENST00000639004 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
FAM49B-230ENST00000639004 MCM6Q14566 821 aa12.48□□□□□ -0.41
FAM49B-230ENST00000639004 PUS10Q3MIT2 529 aaKnown RBP12.48□□□□□ -0.41
FAM49B-230ENST00000639004 MORN1Q5T089 497 aa12.48□□□□□ -0.41
FAM49B-230ENST00000639004 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
FAM49B-230ENST00000639004 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
FAM49B-230ENST00000639004 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms