RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 DZIP1LQ8IYY4 767 aaKnown RBP17.91■□□□□ 0.46
SCARB2-208ENST00000638372 BRD4O60885 1362 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-208ENST00000638372 CDK13Q14004 1512 aaKnown RBP17.9■□□□□ 0.46
SCARB2-208ENST00000638372 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
SCARB2-208ENST00000638372 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
SCARB2-208ENST00000638372 GORABQ5T7V8 394 aa17.89■□□□□ 0.45
SCARB2-208ENST00000638372 PANK1Q8TE04 598 aa17.89■□□□□ 0.45
SCARB2-208ENST00000638372 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
SCARB2-208ENST00000638372 TEFQ10587 303 aa17.89■□□□□ 0.45
SCARB2-208ENST00000638372 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
SCARB2-208ENST00000638372 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
SCARB2-208ENST00000638372 WDR97A6NE52 1622 aa17.88■□□□□ 0.45
SCARB2-208ENST00000638372 TCP11L2Q8N4U5 519 aa17.88■□□□□ 0.45
SCARB2-208ENST00000638372 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
SCARB2-208ENST00000638372 CCDC9Q9Y3X0 531 aaKnown RBP17.88■□□□□ 0.45
SCARB2-208ENST00000638372 DAPK1P53355 1430 aa17.87■□□□□ 0.45
SCARB2-208ENST00000638372 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
SCARB2-208ENST00000638372 HDAC5Q9UQL6 1122 aa17.87■□□□□ 0.45
SCARB2-208ENST00000638372 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
SCARB2-208ENST00000638372 RILPL2Q969X0 211 aa17.86■□□□□ 0.45
SCARB2-208ENST00000638372 EPRSP07814 1512 aaKnown RBP17.86■□□□□ 0.45
SCARB2-208ENST00000638372 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
SCARB2-208ENST00000638372 TAF7LQ5H9L4 462 aa17.86■□□□□ 0.45
SCARB2-208ENST00000638372 PNISRQ8TF01 805 aaKnown RBP17.85■□□□□ 0.45
SCARB2-208ENST00000638372 NUTM2GQ5VZR2 741 aa17.85■□□□□ 0.45
SCARB2-208ENST00000638372 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-208ENST00000638372 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-208ENST00000638372 GPATCH3Q96I76 525 aa17.84■□□□□ 0.45
SCARB2-208ENST00000638372 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.45
SCARB2-208ENST00000638372 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.83■□□□□ 0.45
SCARB2-208ENST00000638372 MSNP26038 577 aaKnown RBP17.83■□□□□ 0.44
SCARB2-208ENST00000638372 PRAM1Q96QH2 718 aa17.82■□□□□ 0.44
SCARB2-208ENST00000638372 PSME1Q06323 249 aa17.82■□□□□ 0.44
SCARB2-208ENST00000638372 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
SCARB2-208ENST00000638372 LNPKQ9C0E8 428 aa17.82■□□□□ 0.44
SCARB2-208ENST00000638372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCARB2-208ENST00000638372 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
SCARB2-208ENST00000638372 GNL2Q13823 731 aaKnown RBP17.81■□□□□ 0.44
SCARB2-208ENST00000638372 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
SCARB2-208ENST00000638372 ST18O60284 1047 aa17.8■□□□□ 0.44
SCARB2-208ENST00000638372 API5Q9BZZ5 524 aaKnown RBP17.8■□□□□ 0.44
SCARB2-208ENST00000638372 FANCIQ9NVI1 1328 aa17.8■□□□□ 0.44
SCARB2-208ENST00000638372 ISY1Q9ULR0 285 aaKnown RBP17.79■□□□□ 0.44
SCARB2-208ENST00000638372 HECW1Q76N89 1606 aa17.79■□□□□ 0.44
SCARB2-208ENST00000638372 DRC7Q8IY82 874 aa17.79■□□□□ 0.44
SCARB2-208ENST00000638372 PCF11O94913 1555 aaKnown RBP17.79■□□□□ 0.44
SCARB2-208ENST00000638372 GNAI1P63096 354 aa17.79■□□□□ 0.44
SCARB2-208ENST00000638372 AKNAQ7Z591 1439 aa17.78■□□□□ 0.44
SCARB2-208ENST00000638372 GOLGA6L3A6NEY3 463 aa17.78■□□□□ 0.44
SCARB2-208ENST00000638372 NLRP6P59044 892 aa17.78■□□□□ 0.44
SCARB2-208ENST00000638372 PLB1Q6P1J6 1458 aa17.78■□□□□ 0.44
SCARB2-208ENST00000638372 TXNDC2Q86VQ3 553 aa17.77■□□□□ 0.44
SCARB2-208ENST00000638372 FOXD4L6Q3SYB3 417 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-208ENST00000638372 FOXD4L3Q6VB84 417 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-208ENST00000638372 KIF16BQ96L93 1317 aa17.77■□□□□ 0.44
SCARB2-208ENST00000638372 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.43
SCARB2-208ENST00000638372 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
SCARB2-208ENST00000638372 NRDCO43847 1150 aa17.76■□□□□ 0.43
SCARB2-208ENST00000638372 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
SCARB2-208ENST00000638372 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
SCARB2-208ENST00000638372 SUPT6HQ7KZ85 1726 aaKnown RBP17.76■□□□□ 0.43
SCARB2-208ENST00000638372 GOLGA6L6A8MZA4 724 aa17.76■□□□□ 0.43
SCARB2-208ENST00000638372 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
SCARB2-208ENST00000638372 BCAR3O75815 825 aa17.75■□□□□ 0.43
SCARB2-208ENST00000638372 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
SCARB2-208ENST00000638372 EXOSC9Q06265 439 aaKnown RBP17.74■□□□□ 0.43
SCARB2-208ENST00000638372 TSR2Q969E8 191 aaKnown RBP17.74■□□□□ 0.43
SCARB2-208ENST00000638372 PTMSP20962 102 aa17.73■□□□□ 0.43
SCARB2-208ENST00000638372 ANKRD30BQ9BXX2 1392 aa17.73■□□□□ 0.43
SCARB2-208ENST00000638372 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
SCARB2-208ENST00000638372 ROCK1Q13464 1354 aa17.72■□□□□ 0.43
SCARB2-208ENST00000638372 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
SCARB2-208ENST00000638372 TTC5Q8N0Z6 440 aa17.72■□□□□ 0.43
SCARB2-208ENST00000638372 GTF2E1P29083 439 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-208ENST00000638372 NEXNQ0ZGT2 675 aa17.71■□□□□ 0.43
SCARB2-208ENST00000638372 ABCC5O15440 1437 aa17.71■□□□□ 0.43
SCARB2-208ENST00000638372 EVA1CP58658 441 aa17.71■□□□□ 0.43
SCARB2-208ENST00000638372 SYAP1Q96A49 352 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-208ENST00000638372 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
SCARB2-208ENST00000638372 SLC52A1Q9NWF4 448 aa17.7■□□□□ 0.42
SCARB2-208ENST00000638372 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
SCARB2-208ENST00000638372 ERBINQ96RT1 1412 aa17.7■□□□□ 0.42
SCARB2-208ENST00000638372 TOMM22Q9NS69 142 aa17.7■□□□□ 0.42
SCARB2-208ENST00000638372 DDX49Q9Y6V7 483 aaKnown RBP17.69■□□□□ 0.42
SCARB2-208ENST00000638372 CHAF1AQ13111 956 aaPredicted RBP17.68■□□□□ 0.42
SCARB2-208ENST00000638372 DIAPH3Q9NSV4 1193 aa17.68■□□□□ 0.42
SCARB2-208ENST00000638372 MAGI1Q96QZ7 1491 aaPredicted RBP17.68■□□□□ 0.42
SCARB2-208ENST00000638372 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
SCARB2-208ENST00000638372 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
SCARB2-208ENST00000638372 REC8O95072 547 aa17.67■□□□□ 0.42
SCARB2-208ENST00000638372 ABTB2Q8N961 1025 aa17.67■□□□□ 0.42
SCARB2-208ENST00000638372 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-208ENST00000638372 NLRP2Q9NX02 1062 aa17.67■□□□□ 0.42
SCARB2-208ENST00000638372 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
SCARB2-208ENST00000638372 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
SCARB2-208ENST00000638372 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
SCARB2-208ENST00000638372 KIAA2012Q0VF49 1180 aa17.65■□□□□ 0.42
SCARB2-208ENST00000638372 GSE1Q14687 1217 aa17.65■□□□□ 0.42
SCARB2-208ENST00000638372 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
SCARB2-208ENST00000638372 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms