RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 RSPH4AQ5TD94 716 aa9.76□□□□□ -0.85
CRNDE-213ENST00000635991 MARVELD3Q96A59 401 aa9.76□□□□□ -0.85
CRNDE-213ENST00000635991 VPS9D1Q9Y2B5 631 aa9.76□□□□□ -0.85
CRNDE-213ENST00000635991 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
CRNDE-213ENST00000635991 TK2O00142 265 aa9.75□□□□□ -0.85
CRNDE-213ENST00000635991 FAM98CQ17RN3 349 aaKnown RBP9.75□□□□□ -0.85
CRNDE-213ENST00000635991 DMRTA1Q5VZB9 504 aa9.75□□□□□ -0.85
CRNDE-213ENST00000635991 LAPTM4BQ86VI4 370 aa9.75□□□□□ -0.85
CRNDE-213ENST00000635991 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.75□□□□□ -0.85
CRNDE-213ENST00000635991 NBPF3Q9H094 633 aa9.75□□□□□ -0.85
CRNDE-213ENST00000635991 GJA5P36382 358 aa9.74□□□□□ -0.85
CRNDE-213ENST00000635991 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
CRNDE-213ENST00000635991 TUSC1Q2TAM9 212 aa9.74□□□□□ -0.85
CRNDE-213ENST00000635991 AXIN2Q9Y2T1 843 aa9.74□□□□□ -0.85
CRNDE-213ENST00000635991 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
CRNDE-213ENST00000635991 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
CRNDE-213ENST00000635991 SPIRE2Q8WWL2 714 aa9.73□□□□□ -0.85
CRNDE-213ENST00000635991 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
CRNDE-213ENST00000635991 RDH13Q8NBN7 331 aa9.72□□□□□ -0.85
CRNDE-213ENST00000635991 POLR3EQ9NVU0 708 aa9.72□□□□□ -0.85
CRNDE-213ENST00000635991 SEPT9Q9UHD8 586 aaPredicted RBP9.72□□□□□ -0.85
CRNDE-213ENST00000635991 USP46P62068 366 aa9.71□□□□□ -0.86
CRNDE-213ENST00000635991 SWT1Q5T5J6 900 aaKnown RBP9.71□□□□□ -0.86
CRNDE-213ENST00000635991 FAM163AQ96GL9 167 aaPredicted RBP9.71□□□□□ -0.86
CRNDE-213ENST00000635991 SPTLC1O15269 473 aa9.7□□□□□ -0.86
CRNDE-213ENST00000635991 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
CRNDE-213ENST00000635991 PROCA1Q8NCQ7 364 aaPredicted RBP9.7□□□□□ -0.86
CRNDE-213ENST00000635991 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
CRNDE-213ENST00000635991 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
CRNDE-213ENST00000635991 ZMYND15Q9H091 742 aa9.69□□□□□ -0.86
CRNDE-213ENST00000635991 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
CRNDE-213ENST00000635991 KDM4AO75164 1064 aa9.68□□□□□ -0.86
CRNDE-213ENST00000635991 GCGRP47871 477 aa9.68□□□□□ -0.86
CRNDE-213ENST00000635991 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
CRNDE-213ENST00000635991 RSBN1LQ6PCB5 846 aaPredicted RBP9.68□□□□□ -0.86
CRNDE-213ENST00000635991 LSM11P83369 360 aaKnown RBP eCLIP9.67□□□□□ -0.86
CRNDE-213ENST00000635991 NECTIN2Q92692 538 aa9.67□□□□□ -0.86
CRNDE-213ENST00000635991 LIMD1Q9UGP4 676 aa9.67□□□□□ -0.86
CRNDE-213ENST00000635991 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
CRNDE-213ENST00000635991 MOXD2PA6NHM9 499 aa9.65□□□□□ -0.86
CRNDE-213ENST00000635991 SLC10A3P09131 477 aa9.65□□□□□ -0.86
CRNDE-213ENST00000635991 MCM6Q14566 821 aa9.65□□□□□ -0.86
CRNDE-213ENST00000635991 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
CRNDE-213ENST00000635991 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
CRNDE-213ENST00000635991 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
CRNDE-213ENST00000635991 BANK1Q8NDB2 785 aa9.65□□□□□ -0.86
CRNDE-213ENST00000635991 HOXA2O43364 376 aa9.64□□□□□ -0.87
CRNDE-213ENST00000635991 TMEM259Q4ZIN3 620 aa9.64□□□□□ -0.87
CRNDE-213ENST00000635991 PRPF38BQ5VTL8 546 aaKnown RBP9.64□□□□□ -0.87
CRNDE-213ENST00000635991 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
CRNDE-213ENST00000635991 MRPL50Q8N5N7 158 aaKnown RBP9.64□□□□□ -0.87
CRNDE-213ENST00000635991 ZFRQ96KR1 1074 aaKnown RBP9.64□□□□□ -0.87
CRNDE-213ENST00000635991 RFC5P40937 340 aa9.63□□□□□ -0.87
CRNDE-213ENST00000635991 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
CRNDE-213ENST00000635991 SPDYE5A6NIY4 337 aa9.61□□□□□ -0.87
CRNDE-213ENST00000635991 HRO43593 1189 aa9.61□□□□□ -0.87
CRNDE-213ENST00000635991 A6NJR5 290 aa9.6□□□□□ -0.87
CRNDE-213ENST00000635991 SOCS7O14512 581 aa9.6□□□□□ -0.87
CRNDE-213ENST00000635991 LILRB3O75022 631 aa9.6□□□□□ -0.87
CRNDE-213ENST00000635991 UBTFP17480 764 aaKnown RBP9.6□□□□□ -0.87
CRNDE-213ENST00000635991 NDUFV2P19404 249 aa9.6□□□□□ -0.87
CRNDE-213ENST00000635991 KMT5BQ4FZB7 885 aa9.6□□□□□ -0.87
CRNDE-213ENST00000635991 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
CRNDE-213ENST00000635991 CFHP08603 1231 aa9.59□□□□□ -0.87
CRNDE-213ENST00000635991 FDX1P10109 184 aa9.59□□□□□ -0.87
CRNDE-213ENST00000635991 ZBTB3Q9H5J0 574 aa9.59□□□□□ -0.87
CRNDE-213ENST00000635991 RNF40O75150 1001 aa9.58□□□□□ -0.88
CRNDE-213ENST00000635991 STAC3Q96MF2 364 aa9.58□□□□□ -0.88
CRNDE-213ENST00000635991 PRR14Q9BWN1 585 aa9.58□□□□□ -0.88
CRNDE-213ENST00000635991 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.58□□□□□ -0.88
CRNDE-213ENST00000635991 QPCTQ16769 361 aa9.57□□□□□ -0.88
CRNDE-213ENST00000635991 ANKK1Q8NFD2 765 aa9.57□□□□□ -0.88
CRNDE-213ENST00000635991 APBB1O00213 710 aa9.56□□□□□ -0.88
CRNDE-213ENST00000635991 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
CRNDE-213ENST00000635991 FUT2Q10981 343 aa9.56□□□□□ -0.88
CRNDE-213ENST00000635991 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
CRNDE-213ENST00000635991 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
CRNDE-213ENST00000635991 GOLGA8CPA6NN73 597 aa9.55□□□□□ -0.88
CRNDE-213ENST00000635991 NUTM2BA6NNL0 878 aaPredicted RBP9.55□□□□□ -0.88
CRNDE-213ENST00000635991 NUTM2EB1AL46 878 aaPredicted RBP9.55□□□□□ -0.88
CRNDE-213ENST00000635991 NUTM2DQ5VT03 806 aaPredicted RBP9.55□□□□□ -0.88
CRNDE-213ENST00000635991 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
CRNDE-213ENST00000635991 NUTM2AQ8IVF1 878 aaPredicted RBP9.55□□□□□ -0.88
CRNDE-213ENST00000635991 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
CRNDE-213ENST00000635991 HRCP23327 699 aa9.54□□□□□ -0.88
CRNDE-213ENST00000635991 MTMR2Q13614 643 aa9.54□□□□□ -0.88
CRNDE-213ENST00000635991 PCDHGC3Q9UN70 934 aa9.54□□□□□ -0.88
CRNDE-213ENST00000635991 SOWAHBA6NEL2 793 aa9.53□□□□□ -0.88
CRNDE-213ENST00000635991 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
CRNDE-213ENST00000635991 RAD21O60216 631 aa9.53□□□□□ -0.88
CRNDE-213ENST00000635991 ANKRD13DQ6ZTN6 518 aa9.53□□□□□ -0.88
CRNDE-213ENST00000635991 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
CRNDE-213ENST00000635991 CABLES1Q8TDN4 633 aa9.52□□□□□ -0.89
CRNDE-213ENST00000635991 GUCA2AQ02747 115 aa9.51□□□□□ -0.89
CRNDE-213ENST00000635991 AP1G2O75843 785 aa9.5□□□□□ -0.89
CRNDE-213ENST00000635991 MORN1Q5T089 497 aa9.5□□□□□ -0.89
CRNDE-213ENST00000635991 HELBQ8NG08 1087 aaPredicted RBP9.5□□□□□ -0.89
CRNDE-213ENST00000635991 HLA-CQ95604 372 aa9.5□□□□□ -0.89
CRNDE-213ENST00000635991 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
CRNDE-213ENST00000635991 PRM3Q9NNZ6 103 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms