RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 MYO5BQ9ULV0 1848 aa22.28■■□□□ 1.16
HSPG2-214ENST00000635682 RPRD2Q5VT52 1461 aaKnown RBP22.28■■□□□ 1.16
HSPG2-214ENST00000635682 TMEM94Q12767 1356 aa22.27■■□□□ 1.16
HSPG2-214ENST00000635682 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
HSPG2-214ENST00000635682 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
HSPG2-214ENST00000635682 PPP1R15AO75807 674 aaPredicted RBP22.23■■□□□ 1.15
HSPG2-214ENST00000635682 UNC13BO14795 1591 aa22.23■■□□□ 1.15
HSPG2-214ENST00000635682 GCC2Q8IWJ2 1684 aa22.23■■□□□ 1.15
HSPG2-214ENST00000635682 NUTM2DQ5VT03 806 aaPredicted RBP22.22■■□□□ 1.15
HSPG2-214ENST00000635682 RIMS2Q9UQ26 1411 aa22.22■■□□□ 1.15
HSPG2-214ENST00000635682 ZFYVE9O95405 1425 aa22.21■■□□□ 1.15
HSPG2-214ENST00000635682 TMEM131LA2VDJ0 1609 aa22.2■■□□□ 1.14
HSPG2-214ENST00000635682 E9PCH4 1651 aa22.2■■□□□ 1.14
HSPG2-214ENST00000635682 HDGFP51858 240 aaKnown RBP22.19■■□□□ 1.14
HSPG2-214ENST00000635682 NUP155O75694 1391 aa22.19■■□□□ 1.14
HSPG2-214ENST00000635682 PLEKHG1Q9ULL1 1385 aa22.18■■□□□ 1.14
HSPG2-214ENST00000635682 FAM135BQ49AJ0 1406 aa22.17■■□□□ 1.14
HSPG2-214ENST00000635682 IQGAP3Q86VI3 1631 aa22.15■■□□□ 1.14
HSPG2-214ENST00000635682 NWD1Q149M9 1564 aa22.14■■□□□ 1.13
HSPG2-214ENST00000635682 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
HSPG2-214ENST00000635682 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.13
HSPG2-214ENST00000635682 CHD2O14647 1828 aaKnown RBP22.13■■□□□ 1.13
HSPG2-214ENST00000635682 TBX22Q9Y458 520 aa22.13■■□□□ 1.13
HSPG2-214ENST00000635682 MSH6P52701 1360 aa22.12■■□□□ 1.13
HSPG2-214ENST00000635682 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
HSPG2-214ENST00000635682 SLAIN2Q9P270 581 aa22.1■■□□□ 1.13
HSPG2-214ENST00000635682 HFM1A2PYH4 1435 aa22.08■■□□□ 1.13
HSPG2-214ENST00000635682 ADAMTS13Q76LX8 1427 aa22.08■■□□□ 1.13
HSPG2-214ENST00000635682 TRIM52Q96A61 297 aa22.08■■□□□ 1.13
HSPG2-214ENST00000635682 RGS17Q9UGC6 210 aaPredicted RBP22.08■■□□□ 1.13
HSPG2-214ENST00000635682 NAIPQ13075 1403 aa22.06■■□□□ 1.12
HSPG2-214ENST00000635682 C14orf37Q86TY3 774 aa22.06■■□□□ 1.12
HSPG2-214ENST00000635682 ZNF326Q5BKZ1 582 aaKnown RBP22.02■■□□□ 1.12
HSPG2-214ENST00000635682 AMOTL2Q9Y2J4 779 aa22.01■■□□□ 1.11
HSPG2-214ENST00000635682 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
HSPG2-214ENST00000635682 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
HSPG2-214ENST00000635682 PHLPP1O60346 1717 aa21.99■■□□□ 1.11
HSPG2-214ENST00000635682 DIP2AQ14689 1571 aa21.99■■□□□ 1.11
HSPG2-214ENST00000635682 PIK3R4Q99570 1358 aa21.99■■□□□ 1.11
HSPG2-214ENST00000635682 PTPRUQ92729 1446 aa21.98■■□□□ 1.11
HSPG2-214ENST00000635682 C19orf44Q9H6X5 657 aa21.98■■□□□ 1.11
HSPG2-214ENST00000635682 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
HSPG2-214ENST00000635682 ATF3P18847 181 aa21.97■■□□□ 1.11
HSPG2-214ENST00000635682 TRPM2O94759 1503 aa21.96■■□□□ 1.11
HSPG2-214ENST00000635682 POTEAQ6S8J7 498 aa21.96■■□□□ 1.11
HSPG2-214ENST00000635682 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.96■■□□□ 1.11
HSPG2-214ENST00000635682 CADPS2Q86UW7 1296 aa21.95■■□□□ 1.1
HSPG2-214ENST00000635682 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
HSPG2-214ENST00000635682 SETD5Q9C0A6 1442 aa21.93■■□□□ 1.1
HSPG2-214ENST00000635682 NRXN3Q9Y4C0 1643 aa21.93■■□□□ 1.1
HSPG2-214ENST00000635682 JCADQ9P266 1359 aa21.92■■□□□ 1.1
HSPG2-214ENST00000635682 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
HSPG2-214ENST00000635682 METP08581 1390 aa21.9■■□□□ 1.1
HSPG2-214ENST00000635682 COL16A1Q07092 1604 aaPredicted RBP21.89■■□□□ 1.09
HSPG2-214ENST00000635682 SETBP1Q9Y6X0 1596 aa21.89■■□□□ 1.09
HSPG2-214ENST00000635682 KIF1BO60333 1816 aa21.86■■□□□ 1.09
HSPG2-214ENST00000635682 BRINP3Q76B58 766 aa21.86■■□□□ 1.09
HSPG2-214ENST00000635682 XRN1Q8IZH2 1706 aaKnown RBP21.86■■□□□ 1.09
HSPG2-214ENST00000635682 NEXMIFQ5QGS0 1516 aa21.85■■□□□ 1.09
HSPG2-214ENST00000635682 RAB3GAP2Q9H2M9 1393 aa21.83■■□□□ 1.08
HSPG2-214ENST00000635682 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
HSPG2-214ENST00000635682 MEX3CQ5U5Q3 659 aaKnown RBP21.82■■□□□ 1.08
HSPG2-214ENST00000635682 LRP6O75581 1613 aa21.81■■□□□ 1.08
HSPG2-214ENST00000635682 SPATA31A6Q5VVP1 1343 aa21.8■■□□□ 1.08
HSPG2-214ENST00000635682 FOXD1Q16676 465 aa21.8■■□□□ 1.08
HSPG2-214ENST00000635682 DCCP43146 1447 aa21.8■■□□□ 1.08
HSPG2-214ENST00000635682 NUTM2BA6NNL0 878 aaPredicted RBP21.79■■□□□ 1.08
HSPG2-214ENST00000635682 NUTM2EB1AL46 878 aaPredicted RBP21.79■■□□□ 1.08
HSPG2-214ENST00000635682 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
HSPG2-214ENST00000635682 NUTM2AQ8IVF1 878 aaPredicted RBP21.79■■□□□ 1.08
HSPG2-214ENST00000635682 MPHOSPH9Q99550 1183 aa21.79■■□□□ 1.08
HSPG2-214ENST00000635682 MST1RQ04912 1400 aa21.79■■□□□ 1.08
HSPG2-214ENST00000635682 DDX17Q92841 729 aaKnown RBP21.78■■□□□ 1.08
HSPG2-214ENST00000635682 ASXL1Q8IXJ9 1541 aa21.76■■□□□ 1.07
HSPG2-214ENST00000635682 SHPRHQ149N8 1683 aa21.75■■□□□ 1.07
HSPG2-214ENST00000635682 ADGRL3Q9HAR2 1447 aa21.75■■□□□ 1.07
HSPG2-214ENST00000635682 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
HSPG2-214ENST00000635682 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
HSPG2-214ENST00000635682 HRCP23327 699 aa21.73■■□□□ 1.07
HSPG2-214ENST00000635682 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
HSPG2-214ENST00000635682 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
HSPG2-214ENST00000635682 ZNF772Q68DY9 489 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-214ENST00000635682 CCDC144AA2RUR9 1427 aa21.71■■□□□ 1.07
HSPG2-214ENST00000635682 TRIM26Q12899 539 aaPredicted RBP21.7■■□□□ 1.06
HSPG2-214ENST00000635682 LRRC59Q96AG4 307 aaKnown RBP21.7■■□□□ 1.06
HSPG2-214ENST00000635682 NHSL1Q5SYE7 1610 aa21.69■■□□□ 1.06
HSPG2-214ENST00000635682 PPLO60437 1756 aa21.69■■□□□ 1.06
HSPG2-214ENST00000635682 RGL3Q3MIN7 710 aa21.69■■□□□ 1.06
HSPG2-214ENST00000635682 C1orf167Q5SNV9 1468 aa21.68■■□□□ 1.06
HSPG2-214ENST00000635682 PTCH1Q13635 1447 aa21.67■■□□□ 1.06
HSPG2-214ENST00000635682 ORAI2Q96SN7 254 aa21.67■■□□□ 1.06
HSPG2-214ENST00000635682 ADGRF5Q8IZF2 1346 aa21.66■■□□□ 1.06
HSPG2-214ENST00000635682 AFF2P51816 1311 aa21.64■■□□□ 1.05
HSPG2-214ENST00000635682 PNPLA6Q8IY17 1366 aa21.63■■□□□ 1.05
HSPG2-214ENST00000635682 RXRBP28702 533 aa21.63■■□□□ 1.05
HSPG2-214ENST00000635682 STK26Q9P289 416 aa21.63■■□□□ 1.05
HSPG2-214ENST00000635682 C8orf37Q96NL8 207 aa21.62■■□□□ 1.05
HSPG2-214ENST00000635682 ADAMTS2O95450 1211 aa21.59■■□□□ 1.05
HSPG2-214ENST00000635682 TMEM132EQ6IEE7 984 aa21.59■■□□□ 1.05
HSPG2-214ENST00000635682 SPATA31E1Q6ZUB1 1445 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms