RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 KCNA6P17658 529 aa19.26■□□□□ 0.67
PTPN11-206ENST00000635652 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
PTPN11-206ENST00000635652 XIRP1Q702N8 1843 aaKnown RBP19.25■□□□□ 0.67
PTPN11-206ENST00000635652 NUP155O75694 1391 aa19.25■□□□□ 0.67
PTPN11-206ENST00000635652 PROSER2Q86WR7 435 aaPredicted RBP19.24■□□□□ 0.67
PTPN11-206ENST00000635652 E9PCH4 1651 aa19.24■□□□□ 0.67
PTPN11-206ENST00000635652 TMEM94Q12767 1356 aa19.23■□□□□ 0.67
PTPN11-206ENST00000635652 RBM33Q96EV2 1170 aaKnown RBP19.23■□□□□ 0.67
PTPN11-206ENST00000635652 RIMS2Q9UQ26 1411 aa19.22■□□□□ 0.67
PTPN11-206ENST00000635652 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
PTPN11-206ENST00000635652 IQGAP3Q86VI3 1631 aa19.22■□□□□ 0.67
PTPN11-206ENST00000635652 MED1Q15648 1581 aaPredicted RBP19.21■□□□□ 0.67
PTPN11-206ENST00000635652 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
PTPN11-206ENST00000635652 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
PTPN11-206ENST00000635652 NUTM2DQ5VT03 806 aaPredicted RBP19.19■□□□□ 0.66
PTPN11-206ENST00000635652 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.19■□□□□ 0.66
PTPN11-206ENST00000635652 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
PTPN11-206ENST00000635652 NKTRP30414 1462 aaKnown RBP19.15■□□□□ 0.66
PTPN11-206ENST00000635652 CHD2O14647 1828 aaKnown RBP19.14■□□□□ 0.65
PTPN11-206ENST00000635652 TBX22Q9Y458 520 aa19.14■□□□□ 0.65
PTPN11-206ENST00000635652 NWD1Q149M9 1564 aa19.14■□□□□ 0.65
PTPN11-206ENST00000635652 FAM135BQ49AJ0 1406 aa19.13■□□□□ 0.65
PTPN11-206ENST00000635652 MSH6P52701 1360 aa19.12■□□□□ 0.65
PTPN11-206ENST00000635652 RRBP1Q9P2E9 1410 aaKnown RBP19.11■□□□□ 0.65
PTPN11-206ENST00000635652 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
PTPN11-206ENST00000635652 ZNF326Q5BKZ1 582 aaKnown RBP19.09■□□□□ 0.65
PTPN11-206ENST00000635652 SPHKAPQ2M3C7 1700 aa19.08■□□□□ 0.65
PTPN11-206ENST00000635652 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
PTPN11-206ENST00000635652 SLAIN2Q9P270 581 aa19.08■□□□□ 0.64
PTPN11-206ENST00000635652 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.64
PTPN11-206ENST00000635652 NAIPQ13075 1403 aa19.06■□□□□ 0.64
PTPN11-206ENST00000635652 DIP2AQ14689 1571 aa19.05■□□□□ 0.64
PTPN11-206ENST00000635652 PIK3R4Q99570 1358 aa19.05■□□□□ 0.64
PTPN11-206ENST00000635652 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
PTPN11-206ENST00000635652 AMOTL2Q9Y2J4 779 aa19.04■□□□□ 0.64
PTPN11-206ENST00000635652 TRPM2O94759 1503 aa19.02■□□□□ 0.64
PTPN11-206ENST00000635652 NCOA3Q9Y6Q9 1424 aa19.01■□□□□ 0.63
PTPN11-206ENST00000635652 ATF3P18847 181 aa19.01■□□□□ 0.63
PTPN11-206ENST00000635652 C19orf44Q9H6X5 657 aa19.01■□□□□ 0.63
PTPN11-206ENST00000635652 CADPS2Q86UW7 1296 aa18.99■□□□□ 0.63
PTPN11-206ENST00000635652 PHLPP1O60346 1717 aa18.99■□□□□ 0.63
PTPN11-206ENST00000635652 CLTCL1P53675 1640 aa18.99■□□□□ 0.63
PTPN11-206ENST00000635652 KIF1BO60333 1816 aa18.98■□□□□ 0.63
PTPN11-206ENST00000635652 PTPRUQ92729 1446 aa18.98■□□□□ 0.63
PTPN11-206ENST00000635652 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
PTPN11-206ENST00000635652 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
PTPN11-206ENST00000635652 RGS17Q9UGC6 210 aaPredicted RBP18.97■□□□□ 0.63
PTPN11-206ENST00000635652 HFM1A2PYH4 1435 aa18.97■□□□□ 0.63
PTPN11-206ENST00000635652 SETBP1Q9Y6X0 1596 aa18.96■□□□□ 0.63
PTPN11-206ENST00000635652 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
PTPN11-206ENST00000635652 METP08581 1390 aa18.93■□□□□ 0.62
PTPN11-206ENST00000635652 NEXMIFQ5QGS0 1516 aa18.93■□□□□ 0.62
PTPN11-206ENST00000635652 JCADQ9P266 1359 aa18.93■□□□□ 0.62
PTPN11-206ENST00000635652 VGFO15240 615 aaPredicted RBP18.91■□□□□ 0.62
PTPN11-206ENST00000635652 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
PTPN11-206ENST00000635652 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
PTPN11-206ENST00000635652 FOXD1Q16676 465 aa18.88■□□□□ 0.61
PTPN11-206ENST00000635652 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
PTPN11-206ENST00000635652 BRINP3Q76B58 766 aa18.87■□□□□ 0.61
PTPN11-206ENST00000635652 DCCP43146 1447 aa18.86■□□□□ 0.61
PTPN11-206ENST00000635652 RPGRIP1LQ68CZ1 1315 aa18.86■□□□□ 0.61
PTPN11-206ENST00000635652 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
PTPN11-206ENST00000635652 MEX3CQ5U5Q3 659 aaKnown RBP18.84■□□□□ 0.61
PTPN11-206ENST00000635652 SPATA31A6Q5VVP1 1343 aa18.83■□□□□ 0.61
PTPN11-206ENST00000635652 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
PTPN11-206ENST00000635652 MST1RQ04912 1400 aa18.82■□□□□ 0.6
PTPN11-206ENST00000635652 ADGRL3Q9HAR2 1447 aa18.82■□□□□ 0.6
PTPN11-206ENST00000635652 RGL3Q3MIN7 710 aa18.81■□□□□ 0.6
PTPN11-206ENST00000635652 PPLO60437 1756 aa18.81■□□□□ 0.6
PTPN11-206ENST00000635652 ASXL1Q8IXJ9 1541 aa18.8■□□□□ 0.6
PTPN11-206ENST00000635652 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
PTPN11-206ENST00000635652 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
PTPN11-206ENST00000635652 NUTM2BA6NNL0 878 aaPredicted RBP18.79■□□□□ 0.6
PTPN11-206ENST00000635652 NUTM2EB1AL46 878 aaPredicted RBP18.79■□□□□ 0.6
PTPN11-206ENST00000635652 NUTM2AQ8IVF1 878 aaPredicted RBP18.79■□□□□ 0.6
PTPN11-206ENST00000635652 SETD1AO15047 1707 aaKnown RBP18.79■□□□□ 0.6
PTPN11-206ENST00000635652 SHPRHQ149N8 1683 aa18.79■□□□□ 0.6
PTPN11-206ENST00000635652 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
PTPN11-206ENST00000635652 LRP6O75581 1613 aa18.78■□□□□ 0.6
PTPN11-206ENST00000635652 DDX17Q92841 729 aaKnown RBP18.77■□□□□ 0.6
PTPN11-206ENST00000635652 PTCH1Q13635 1447 aa18.76■□□□□ 0.59
PTPN11-206ENST00000635652 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
PTPN11-206ENST00000635652 NHSL1Q5SYE7 1610 aa18.75■□□□□ 0.59
PTPN11-206ENST00000635652 ZNF772Q68DY9 489 aaPredicted RBP18.75■□□□□ 0.59
PTPN11-206ENST00000635652 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
PTPN11-206ENST00000635652 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
PTPN11-206ENST00000635652 C1orf167Q5SNV9 1468 aa18.72■□□□□ 0.59
PTPN11-206ENST00000635652 STK26Q9P289 416 aa18.72■□□□□ 0.59
PTPN11-206ENST00000635652 ACIN1Q9UKV3 1341 aaKnown RBP18.72■□□□□ 0.59
PTPN11-206ENST00000635652 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
PTPN11-206ENST00000635652 ORAI2Q96SN7 254 aa18.71■□□□□ 0.59
PTPN11-206ENST00000635652 SPATA31E1Q6ZUB1 1445 aa18.71■□□□□ 0.59
PTPN11-206ENST00000635652 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
PTPN11-206ENST00000635652 TMEM132EQ6IEE7 984 aa18.68■□□□□ 0.58
PTPN11-206ENST00000635652 IFT172Q9UG01 1749 aa18.68■□□□□ 0.58
PTPN11-206ENST00000635652 AFF2P51816 1311 aa18.67■□□□□ 0.58
PTPN11-206ENST00000635652 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
PTPN11-206ENST00000635652 WAPLQ7Z5K2 1190 aa18.66■□□□□ 0.58
PTPN11-206ENST00000635652 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
PTPN11-206ENST00000635652 RXRBP28702 533 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms