RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 MIA2Q96PC5 1412 aa5.48□□□□□ -1.53
SCARNA4.1-201ENST00000628597 SETD5Q9C0A6 1442 aa5.48□□□□□ -1.53
SCARNA4.1-201ENST00000628597 UNC13BO14795 1591 aa5.47□□□□□ -1.53
SCARNA4.1-201ENST00000628597 MPNDQ8N594 471 aa5.47□□□□□ -1.53
SCARNA4.1-201ENST00000628597 CAMKK2Q96RR4 588 aa5.47□□□□□ -1.53
SCARNA4.1-201ENST00000628597 ABCC3O15438 1527 aa5.47□□□□□ -1.53
SCARNA4.1-201ENST00000628597 NLRP1Q9C000 1473 aa5.46□□□□□ -1.53
SCARNA4.1-201ENST00000628597 PNPLA6Q8IY17 1366 aa5.46□□□□□ -1.54
SCARNA4.1-201ENST00000628597 APBA3O96018 575 aa5.46□□□□□ -1.54
SCARNA4.1-201ENST00000628597 LTKP29376 864 aa5.46□□□□□ -1.54
SCARNA4.1-201ENST00000628597 C19orf44Q9H6X5 657 aa5.46□□□□□ -1.54
SCARNA4.1-201ENST00000628597 CCDC9Q9Y3X0 531 aaKnown RBP5.46□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ATP10DQ9P241 1426 aa5.46□□□□□ -1.54
SCARNA4.1-201ENST00000628597 CHD4Q14839 1912 aa5.46□□□□□ -1.54
SCARNA4.1-201ENST00000628597 AHDC1Q5TGY3 1603 aaPredicted RBP5.45□□□□□ -1.54
SCARNA4.1-201ENST00000628597 GRIN3BO60391 1043 aa5.45□□□□□ -1.54
SCARNA4.1-201ENST00000628597 UNC5CLQ8IV45 518 aa5.45□□□□□ -1.54
SCARNA4.1-201ENST00000628597 SLC26A8Q96RN1 970 aa5.45□□□□□ -1.54
SCARNA4.1-201ENST00000628597 PARD3Q8TEW0 1356 aa5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 PRDM15P57071 1507 aaPredicted RBP5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 MAP3K1Q13233 1512 aa5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 CCDC85CA6NKD9 419 aa5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 RGS19P49795 217 aa5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 PTCH1Q13635 1447 aa5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ATF5Q9Y2D1 282 aaPredicted RBP5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 KIF14Q15058 1648 aa5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 PITPNM2Q9BZ72 1349 aa5.44□□□□□ -1.54
SCARNA4.1-201ENST00000628597 TOMM70O94826 608 aa5.43□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ZBTB7AO95365 584 aa5.43□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ABHD8Q96I13 439 aa5.43□□□□□ -1.54
SCARNA4.1-201ENST00000628597 A2MP01023 1474 aa5.43□□□□□ -1.54
SCARNA4.1-201ENST00000628597 CLTCQ00610 1675 aaKnown RBP5.43□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ITSN2Q9NZM3 1697 aa5.43□□□□□ -1.54
SCARNA4.1-201ENST00000628597 BIVM-ERCC5R4GMW8 1640 aa5.42□□□□□ -1.54
SCARNA4.1-201ENST00000628597 EP400Q96L91 3159 aa5.42□□□□□ -1.54
SCARNA4.1-201ENST00000628597 HTRA3P83110 453 aa5.42□□□□□ -1.54
SCARNA4.1-201ENST00000628597 STAG3Q9UJ98 1225 aa5.42□□□□□ -1.54
SCARNA4.1-201ENST00000628597 SPAG9O60271 1321 aaKnown RBP5.42□□□□□ -1.54
SCARNA4.1-201ENST00000628597 WASHC2CQ9Y4E1 1318 aa5.42□□□□□ -1.54
SCARNA4.1-201ENST00000628597 XIRP1Q702N8 1843 aaKnown RBP5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ABCA6Q8N139 1617 aa5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 DISP2A7MBM2 1401 aa5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 CAMSAP2Q08AD1 1489 aa5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ONECUT3O60422 494 aaPredicted RBP5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 KLHL34Q8N239 644 aa5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 CFAP44Q96MT7 982 aa5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 DIP2AQ14689 1571 aa5.41□□□□□ -1.54
SCARNA4.1-201ENST00000628597 KIF3CO14782 793 aa5.4□□□□□ -1.54
SCARNA4.1-201ENST00000628597 TRIM37O94972 964 aa5.4□□□□□ -1.54
SCARNA4.1-201ENST00000628597 PTGER2P43116 358 aa5.4□□□□□ -1.54
SCARNA4.1-201ENST00000628597 DDX17Q92841 729 aaKnown RBP5.4□□□□□ -1.54
SCARNA4.1-201ENST00000628597 ARXQ96QS3 562 aa5.4□□□□□ -1.54
SCARNA4.1-201ENST00000628597 PRDM10Q9NQV6 1147 aa5.4□□□□□ -1.54
SCARNA4.1-201ENST00000628597 TIAM1Q13009 1591 aa5.4□□□□□ -1.55
SCARNA4.1-201ENST00000628597 NCOA3Q9Y6Q9 1424 aa5.4□□□□□ -1.55
SCARNA4.1-201ENST00000628597 NKTRP30414 1462 aaKnown RBP5.39□□□□□ -1.55
SCARNA4.1-201ENST00000628597 FAM182BQ5T319 152 aa5.39□□□□□ -1.55
SCARNA4.1-201ENST00000628597 PZPP20742 1482 aa5.39□□□□□ -1.55
SCARNA4.1-201ENST00000628597 DLC1Q96QB1 1528 aa5.38□□□□□ -1.55
SCARNA4.1-201ENST00000628597 VPS72Q15906 364 aa5.38□□□□□ -1.55
SCARNA4.1-201ENST00000628597 FAM196AQ6ZSG2 479 aa5.38□□□□□ -1.55
SCARNA4.1-201ENST00000628597 C16orf71Q8IYS4 520 aaPredicted RBP5.38□□□□□ -1.55
SCARNA4.1-201ENST00000628597 CDK11AQ9UQ88 783 aaPredicted RBP5.38□□□□□ -1.55
SCARNA4.1-201ENST00000628597 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
SCARNA4.1-201ENST00000628597 PRPF38BQ5VTL8 546 aaKnown RBP5.37□□□□□ -1.55
SCARNA4.1-201ENST00000628597 GCC1Q96CN9 775 aa5.37□□□□□ -1.55
SCARNA4.1-201ENST00000628597 ARHGAP5Q13017 1502 aa5.37□□□□□ -1.55
SCARNA4.1-201ENST00000628597 KIF3BO15066 747 aa5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 SLC17A8Q8NDX2 589 aa5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 AIDAQ96BJ3 306 aa5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 MTFR1LQ9H019 292 aa5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 NCOA2Q15596 1464 aa5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 ARHGAP35Q9NRY4 1499 aa5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 ZC3H13Q5T200 1668 aaKnown RBP5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 ADGBQ8N7X0 1667 aa5.36□□□□□ -1.55
SCARNA4.1-201ENST00000628597 UTRNP46939 3433 aa5.35□□□□□ -1.55
SCARNA4.1-201ENST00000628597 NRKQ7Z2Y5 1582 aa5.35□□□□□ -1.55
SCARNA4.1-201ENST00000628597 FMN1Q68DA7 1419 aa5.35□□□□□ -1.55
SCARNA4.1-201ENST00000628597 CTCFP49711 727 aaPredicted RBP5.35□□□□□ -1.55
SCARNA4.1-201ENST00000628597 FAM98CQ17RN3 349 aaKnown RBP5.35□□□□□ -1.55
SCARNA4.1-201ENST00000628597 BCL11BQ9C0K0 894 aaPredicted RBP5.35□□□□□ -1.55
SCARNA4.1-201ENST00000628597 MROH1Q8NDA8 1641 aa5.34□□□□□ -1.55
SCARNA4.1-201ENST00000628597 NUP153P49790 1475 aaKnown RBP5.34□□□□□ -1.55
SCARNA4.1-201ENST00000628597 PDE4DIPQ5VU43 2346 aa5.34□□□□□ -1.55
SCARNA4.1-201ENST00000628597 FSTL1Q12841 308 aa5.34□□□□□ -1.55
SCARNA4.1-201ENST00000628597 RBM46Q8TBY0 533 aaKnown RBP5.34□□□□□ -1.55
SCARNA4.1-201ENST00000628597 ZNF777Q9ULD5 760 aaPredicted RBP5.34□□□□□ -1.55
SCARNA4.1-201ENST00000628597 SPHKAPQ2M3C7 1700 aa5.34□□□□□ -1.56
SCARNA4.1-201ENST00000628597 KDM5AP29375 1690 aaKnown RBP5.34□□□□□ -1.56
SCARNA4.1-201ENST00000628597 ASXL1Q8IXJ9 1541 aa5.33□□□□□ -1.56
SCARNA4.1-201ENST00000628597 MAP3K5Q99683 1374 aa5.33□□□□□ -1.56
SCARNA4.1-201ENST00000628597 HAP1P54257 671 aaPredicted RBP5.33□□□□□ -1.56
SCARNA4.1-201ENST00000628597 PDGFDQ9GZP0 370 aaPredicted RBP5.33□□□□□ -1.56
SCARNA4.1-201ENST00000628597 ATP1B4Q9UN42 357 aaPredicted RBP5.33□□□□□ -1.56
SCARNA4.1-201ENST00000628597 TMEM2Q9UHN6 1383 aa5.32□□□□□ -1.56
SCARNA4.1-201ENST00000628597 FOXN1O15353 648 aa5.32□□□□□ -1.56
SCARNA4.1-201ENST00000628597 STK32BQ9NY57 414 aa5.32□□□□□ -1.56
SCARNA4.1-201ENST00000628597 DHX57Q6P158 1386 aaKnown RBP5.31□□□□□ -1.56
SCARNA4.1-201ENST00000628597 SOS2Q07890 1332 aaPredicted RBP5.31□□□□□ -1.56
SCARNA4.1-201ENST00000628597 ADGRB2O60241 1585 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms