RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 RNF223E7ERA6 249 aa9.8□□□□□ -0.84
VBP1-204ENST00000625964 SPRYD7Q5W111 196 aa9.8□□□□□ -0.84
VBP1-204ENST00000625964 PADI6Q6TGC4 694 aa9.8□□□□□ -0.84
VBP1-204ENST00000625964 MYT1Q01538 1121 aa9.79□□□□□ -0.84
VBP1-204ENST00000625964 EYA1Q99502 592 aa9.79□□□□□ -0.84
VBP1-204ENST00000625964 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
VBP1-204ENST00000625964 NPDC1Q9NQX5 325 aaPredicted RBP9.78□□□□□ -0.84
VBP1-204ENST00000625964 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
VBP1-204ENST00000625964 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
VBP1-204ENST00000625964 EMID1Q96A84 441 aaPredicted RBP9.75□□□□□ -0.85
VBP1-204ENST00000625964 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
VBP1-204ENST00000625964 DNAJB2P25686 324 aa9.72□□□□□ -0.85
VBP1-204ENST00000625964 ZNF697Q5TEC3 545 aa9.72□□□□□ -0.85
VBP1-204ENST00000625964 ACTN4O43707 911 aaKnown RBP9.71□□□□□ -0.86
VBP1-204ENST00000625964 GDF9O60383 454 aa9.7□□□□□ -0.86
VBP1-204ENST00000625964 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
VBP1-204ENST00000625964 FAM187AA6NFU0 413 aa9.69□□□□□ -0.86
VBP1-204ENST00000625964 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.69□□□□□ -0.86
VBP1-204ENST00000625964 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
VBP1-204ENST00000625964 RBM46Q8TBY0 533 aaKnown RBP9.68□□□□□ -0.86
VBP1-204ENST00000625964 POTECB2RU33 542 aa9.67□□□□□ -0.86
VBP1-204ENST00000625964 TLL1O43897 1013 aa9.67□□□□□ -0.86
VBP1-204ENST00000625964 S1PR4O95977 384 aa9.67□□□□□ -0.86
VBP1-204ENST00000625964 LMOD2Q6P5Q4 547 aa9.67□□□□□ -0.86
VBP1-204ENST00000625964 TMEM134Q9H6X4 195 aa9.67□□□□□ -0.86
VBP1-204ENST00000625964 ADH1BP00325 375 aa9.66□□□□□ -0.86
VBP1-204ENST00000625964 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
VBP1-204ENST00000625964 NR1I2O75469 434 aa9.66□□□□□ -0.86
VBP1-204ENST00000625964 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
VBP1-204ENST00000625964 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
VBP1-204ENST00000625964 AAASQ9NRG9 546 aa9.63□□□□□ -0.87
VBP1-204ENST00000625964 CFHP08603 1231 aa9.62□□□□□ -0.87
VBP1-204ENST00000625964 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
VBP1-204ENST00000625964 PTGDRQ13258 359 aa9.61□□□□□ -0.87
VBP1-204ENST00000625964 CRIPAKQ8N1N5 446 aa9.61□□□□□ -0.87
VBP1-204ENST00000625964 ADGRG1Q9Y653 693 aa9.61□□□□□ -0.87
VBP1-204ENST00000625964 RCCD1A6NED2 376 aa9.6□□□□□ -0.87
VBP1-204ENST00000625964 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
VBP1-204ENST00000625964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.57□□□□□ -0.88
VBP1-204ENST00000625964 AVPP01185 164 aa9.56□□□□□ -0.88
VBP1-204ENST00000625964 RPIAP49247 311 aa9.56□□□□□ -0.88
VBP1-204ENST00000625964 PLA2G2CQ5R387 149 aa9.56□□□□□ -0.88
VBP1-204ENST00000625964 RSPH4AQ5TD94 716 aa9.56□□□□□ -0.88
VBP1-204ENST00000625964 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
VBP1-204ENST00000625964 ARHGEF1Q92888 912 aaKnown RBP9.56□□□□□ -0.88
VBP1-204ENST00000625964 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
VBP1-204ENST00000625964 SLC10A3P09131 477 aa9.56□□□□□ -0.88
VBP1-204ENST00000625964 CTC1Q2NKJ3 1217 aa9.55□□□□□ -0.88
VBP1-204ENST00000625964 FOXC1Q12948 553 aa9.54□□□□□ -0.88
VBP1-204ENST00000625964 SPSB2Q99619 263 aa9.54□□□□□ -0.88
VBP1-204ENST00000625964 WFS1O76024 890 aa9.53□□□□□ -0.88
VBP1-204ENST00000625964 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
VBP1-204ENST00000625964 MLLT3P42568 568 aaPredicted RBP9.53□□□□□ -0.88
VBP1-204ENST00000625964 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
VBP1-204ENST00000625964 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.88
VBP1-204ENST00000625964 TOR4AQ9NXH8 423 aa9.52□□□□□ -0.88
VBP1-204ENST00000625964 STK17AQ9UEE5 414 aa9.52□□□□□ -0.88
VBP1-204ENST00000625964 AXIN1O15169 862 aa9.51□□□□□ -0.89
VBP1-204ENST00000625964 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
VBP1-204ENST00000625964 OATP04181 439 aa9.51□□□□□ -0.89
VBP1-204ENST00000625964 CYP4X1Q8N118 509 aa9.5□□□□□ -0.89
VBP1-204ENST00000625964 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
VBP1-204ENST00000625964 NUTM2FA1L443 756 aa9.48□□□□□ -0.89
VBP1-204ENST00000625964 WIPF1O43516 503 aa9.48□□□□□ -0.89
VBP1-204ENST00000625964 FCHSD2O94868 740 aa9.48□□□□□ -0.89
VBP1-204ENST00000625964 INSM1Q01101 510 aaPredicted RBP9.48□□□□□ -0.89
VBP1-204ENST00000625964 AMER1Q5JTC6 1135 aaPredicted RBP9.48□□□□□ -0.89
VBP1-204ENST00000625964 GMPR2Q9P2T1 348 aaKnown RBP9.48□□□□□ -0.89
VBP1-204ENST00000625964 PXYLP1Q8TE99 480 aa9.47□□□□□ -0.89
VBP1-204ENST00000625964 DACH1Q9UI36 760 aa9.47□□□□□ -0.89
VBP1-204ENST00000625964 FAM161AQ3B820 660 aa9.46□□□□□ -0.89
VBP1-204ENST00000625964 PUS10Q3MIT2 529 aaKnown RBP9.46□□□□□ -0.89
VBP1-204ENST00000625964 NFX1Q12986 1120 aaKnown RBP9.46□□□□□ -0.9
VBP1-204ENST00000625964 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
VBP1-204ENST00000625964 FCF1Q9Y324 198 aaKnown RBP9.45□□□□□ -0.9
VBP1-204ENST00000625964 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
VBP1-204ENST00000625964 MORN1Q5T089 497 aa9.42□□□□□ -0.9
VBP1-204ENST00000625964 THAP11Q96EK4 314 aa9.42□□□□□ -0.9
VBP1-204ENST00000625964 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
VBP1-204ENST00000625964 TTC24A2A3L6 582 aaPredicted RBP9.41□□□□□ -0.9
VBP1-204ENST00000625964 ZBTB24O43167 697 aaPredicted RBP9.41□□□□□ -0.9
VBP1-204ENST00000625964 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
VBP1-204ENST00000625964 METTL3Q86U44 580 aaKnown RBP9.4□□□□□ -0.91
VBP1-204ENST00000625964 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.91
VBP1-204ENST00000625964 FAM160A2Q8N612 972 aaPredicted RBP9.39□□□□□ -0.91
VBP1-204ENST00000625964 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
VBP1-204ENST00000625964 SENP2Q9HC62 589 aa9.39□□□□□ -0.91
VBP1-204ENST00000625964 HIC1Q14526 733 aa9.38□□□□□ -0.91
VBP1-204ENST00000625964 WNT7AO00755 349 aa9.37□□□□□ -0.91
VBP1-204ENST00000625964 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
VBP1-204ENST00000625964 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
VBP1-204ENST00000625964 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
VBP1-204ENST00000625964 FUT2Q10981 343 aa9.36□□□□□ -0.91
VBP1-204ENST00000625964 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
VBP1-204ENST00000625964 ATP13A2Q9NQ11 1180 aa9.36□□□□□ -0.91
VBP1-204ENST00000625964 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
VBP1-204ENST00000625964 BRICD5Q6PL45 260 aa9.35□□□□□ -0.91
VBP1-204ENST00000625964 KIFC2Q96AC6 838 aa9.35□□□□□ -0.91
VBP1-204ENST00000625964 SMPD1P17405 629 aa9.34□□□□□ -0.91
VBP1-204ENST00000625964 SULF1Q8IWU6 871 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms