RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 POLR3EQ9NVU0 708 aa5.65□□□□□ -1.5
SCARNA4-202ENST00000625402 LIMD1Q9UGP4 676 aa5.65□□□□□ -1.5
SCARNA4-202ENST00000625402 CLK2P49760 499 aaKnown RBP5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 SKIV2LQ15477 1246 aaKnown RBP5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 ERICH6Q7L0X2 663 aa5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 SPIRE2Q8WWL2 714 aa5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 HS3ST6Q96QI5 342 aa5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 SLC4A5Q9BY07 1137 aa5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 RABGEF1Q9UJ41 708 aa5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 VPS9D1Q9Y2B5 631 aa5.64□□□□□ -1.51
SCARNA4-202ENST00000625402 SLC10A3P09131 477 aa5.63□□□□□ -1.51
SCARNA4-202ENST00000625402 ZNF687Q8N1G0 1237 aa5.63□□□□□ -1.51
SCARNA4-202ENST00000625402 KCNH8Q96L42 1107 aa5.63□□□□□ -1.51
SCARNA4-202ENST00000625402 PBX2P40425 430 aa5.62□□□□□ -1.51
SCARNA4-202ENST00000625402 MCM6Q14566 821 aa5.62□□□□□ -1.51
SCARNA4-202ENST00000625402 SWT1Q5T5J6 900 aaKnown RBP5.62□□□□□ -1.51
SCARNA4-202ENST00000625402 RSPH6AQ9H0K4 717 aa5.62□□□□□ -1.51
SCARNA4-202ENST00000625402 MOXD2PA6NHM9 499 aa5.61□□□□□ -1.51
SCARNA4-202ENST00000625402 BHMG1C9JSJ3 638 aaPredicted RBP5.61□□□□□ -1.51
SCARNA4-202ENST00000625402 RSBN1LQ6PCB5 846 aaPredicted RBP5.61□□□□□ -1.51
SCARNA4-202ENST00000625402 SULF1Q8IWU6 871 aa5.61□□□□□ -1.51
SCARNA4-202ENST00000625402 RDH13Q8NBN7 331 aa5.61□□□□□ -1.51
SCARNA4-202ENST00000625402 HLA-CQ95604 372 aa5.61□□□□□ -1.51
SCARNA4-202ENST00000625402 SUPT5HO00267 1087 aaKnown RBP5.6□□□□□ -1.51
SCARNA4-202ENST00000625402 NDUFV2P19404 249 aa5.6□□□□□ -1.51
SCARNA4-202ENST00000625402 QPCTQ16769 361 aa5.6□□□□□ -1.51
SCARNA4-202ENST00000625402 FAM98CQ17RN3 349 aaKnown RBP5.6□□□□□ -1.51
SCARNA4-202ENST00000625402 SPTLC1O15269 473 aa5.59□□□□□ -1.51
SCARNA4-202ENST00000625402 GUCA2AQ02747 115 aa5.59□□□□□ -1.51
SCARNA4-202ENST00000625402 SAMD7Q7Z3H4 446 aa5.59□□□□□ -1.51
SCARNA4-202ENST00000625402 RIC3Q7Z5B4 369 aa5.59□□□□□ -1.51
SCARNA4-202ENST00000625402 PCDHB15Q9Y5E8 787 aa5.59□□□□□ -1.51
SCARNA4-202ENST00000625402 HOXA2O43364 376 aa5.58□□□□□ -1.52
SCARNA4-202ENST00000625402 RFC5P40937 340 aa5.58□□□□□ -1.52
SCARNA4-202ENST00000625402 GCGRP47871 477 aa5.58□□□□□ -1.52
SCARNA4-202ENST00000625402 LSM11P83369 360 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCARNA4-202ENST00000625402 CSPP1Q1MSJ5 1256 aa5.58□□□□□ -1.52
SCARNA4-202ENST00000625402 NUTM1Q86Y26 1132 aa5.58□□□□□ -1.52
SCARNA4-202ENST00000625402 ZMYND15Q9H091 742 aa5.58□□□□□ -1.52
SCARNA4-202ENST00000625402 POTEMA6NI47 508 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 TK2O00142 265 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 HRO43593 1189 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 KDM4AO75164 1064 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 FLIIQ13045 1269 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 PPP2R2DQ66LE6 453 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 ADGRD1Q6QNK2 874 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 POTEGQ6S5H5 508 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 CABLES1Q8TDN4 633 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 CLUAP1Q96AJ1 413 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 C1orf115Q9H7X2 142 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 PCDHGC3Q9UN70 934 aa5.57□□□□□ -1.52
SCARNA4-202ENST00000625402 CFHP08603 1231 aa5.56□□□□□ -1.52
SCARNA4-202ENST00000625402 DIXDC1Q155Q3 683 aa5.56□□□□□ -1.52
SCARNA4-202ENST00000625402 TUSC1Q2TAM9 212 aa5.56□□□□□ -1.52
SCARNA4-202ENST00000625402 LAPTM4BQ86VI4 370 aa5.56□□□□□ -1.52
SCARNA4-202ENST00000625402 POM121Q96HA1 1249 aa5.56□□□□□ -1.52
SCARNA4-202ENST00000625402 ZFRQ96KR1 1074 aaKnown RBP5.56□□□□□ -1.52
SCARNA4-202ENST00000625402 NBPF3Q9H094 633 aa5.56□□□□□ -1.52
SCARNA4-202ENST00000625402 LILRB3O75022 631 aa5.55□□□□□ -1.52
SCARNA4-202ENST00000625402 RNF40O75150 1001 aa5.55□□□□□ -1.52
SCARNA4-202ENST00000625402 FUT2Q10981 343 aa5.55□□□□□ -1.52
SCARNA4-202ENST00000625402 RTL5Q5HYW3 569 aaPredicted RBP5.55□□□□□ -1.52
SCARNA4-202ENST00000625402 SNRKQ9NRH2 765 aa5.55□□□□□ -1.52
SCARNA4-202ENST00000625402 ATP1B4Q9UN42 357 aaPredicted RBP5.55□□□□□ -1.52
SCARNA4-202ENST00000625402 GJA5P36382 358 aa5.54□□□□□ -1.52
SCARNA4-202ENST00000625402 USP46P62068 366 aa5.54□□□□□ -1.52
SCARNA4-202ENST00000625402 MTMR14Q8NCE2 650 aa5.54□□□□□ -1.52
SCARNA4-202ENST00000625402 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
SCARNA4-202ENST00000625402 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
SCARNA4-202ENST00000625402 FDX1P10109 184 aa5.53□□□□□ -1.52
SCARNA4-202ENST00000625402 HRCP23327 699 aa5.53□□□□□ -1.52
SCARNA4-202ENST00000625402 SLF2Q8IX21 1173 aa5.53□□□□□ -1.52
SCARNA4-202ENST00000625402 MRPL50Q8N5N7 158 aaKnown RBP5.53□□□□□ -1.52
SCARNA4-202ENST00000625402 SPDYE5A6NIY4 337 aa5.52□□□□□ -1.53
SCARNA4-202ENST00000625402 ARID3CA6NKF2 412 aa5.52□□□□□ -1.53
SCARNA4-202ENST00000625402 UBTFP17480 764 aaKnown RBP5.52□□□□□ -1.53
SCARNA4-202ENST00000625402 A6NJR5 290 aa5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 USP17L8P0C7I0 530 aa5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 BCAMP50895 628 aa5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 PRPF38BQ5VTL8 546 aaKnown RBP5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 ANKRD13DQ6ZTN6 518 aa5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 SYMPKQ92797 1274 aaKnown RBP5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 LRCH3Q96II8 777 aa5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 COG6Q9Y2V7 657 aa5.51□□□□□ -1.53
SCARNA4-202ENST00000625402 CFAP99D6REC4 459 aa5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 GPR37L1O60883 481 aa5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 AP1G2O75843 785 aa5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 PUS10Q3MIT2 529 aaKnown RBP5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 RSPH4AQ5TD94 716 aa5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 CDAN1Q8IWY9 1227 aa5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 FNBP4Q8N3X1 1017 aaPredicted RBP5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 BANK1Q8NDB2 785 aa5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 ZBTB3Q9H5J0 574 aa5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 HMX1Q9NP08 348 aaPredicted RBP5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.5□□□□□ -1.53
SCARNA4-202ENST00000625402 SOWAHBA6NEL2 793 aa5.49□□□□□ -1.53
SCARNA4-202ENST00000625402 APLP1P51693 650 aa5.49□□□□□ -1.53
SCARNA4-202ENST00000625402 TMEM259Q4ZIN3 620 aa5.49□□□□□ -1.53
SCARNA4-202ENST00000625402 MORN1Q5T089 497 aa5.49□□□□□ -1.53
SCARNA4-202ENST00000625402 PROSER2Q86WR7 435 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms