RNA–Protein interactions for RNA: ENST00000622308.4

SPPL2B-214, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best)

Gene SPPL2B, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-214ENST00000622308 RPRD2Q5VT52 1461 aaKnown RBP26.71■■□□□ 1.87
SPPL2B-214ENST00000622308 FAM50AQ14320 339 aaKnown RBP26.71■■□□□ 1.87
SPPL2B-214ENST00000622308 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
SPPL2B-214ENST00000622308 POTEAQ6S8J7 498 aa26.67■■□□□ 1.86
SPPL2B-214ENST00000622308 BCANQ96GW7 911 aa26.67■■□□□ 1.86
SPPL2B-214ENST00000622308 PLEKHG1Q9ULL1 1385 aa26.67■■□□□ 1.86
SPPL2B-214ENST00000622308 ROBO1Q9Y6N7 1651 aa26.66■■□□□ 1.86
SPPL2B-214ENST00000622308 RIMS2Q9UQ26 1411 aa26.65■■□□□ 1.86
SPPL2B-214ENST00000622308 MSH6P52701 1360 aa26.64■■□□□ 1.86
SPPL2B-214ENST00000622308 SLAIN2Q9P270 581 aa26.64■■□□□ 1.86
SPPL2B-214ENST00000622308 TBX22Q9Y458 520 aa26.61■■□□□ 1.85
SPPL2B-214ENST00000622308 TMEM131LA2VDJ0 1609 aa26.6■■□□□ 1.85
SPPL2B-214ENST00000622308 PPP1R15AO75807 674 aaPredicted RBP26.59■■□□□ 1.85
SPPL2B-214ENST00000622308 HDGFP51858 240 aaKnown RBP26.58■■□□□ 1.85
SPPL2B-214ENST00000622308 ADAMTS13Q76LX8 1427 aa26.56■■□□□ 1.84
SPPL2B-214ENST00000622308 NUTM2DQ5VT03 806 aaPredicted RBP26.55■■□□□ 1.84
SPPL2B-214ENST00000622308 CHGAP10645 457 aaKnown RBP26.54■■□□□ 1.84
SPPL2B-214ENST00000622308 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.54■■□□□ 1.843e-6■■□□□ 14.2
SPPL2B-214ENST00000622308 UNC13BO14795 1591 aa26.54■■□□□ 1.84
SPPL2B-214ENST00000622308 GCC2Q8IWJ2 1684 aa26.54■■□□□ 1.84
SPPL2B-214ENST00000622308 JCADQ9P266 1359 aa26.53■■□□□ 1.84
SPPL2B-214ENST00000622308 NCOA3Q9Y6Q9 1424 aa26.53■■□□□ 1.84
SPPL2B-214ENST00000622308 CHD2O14647 1828 aaKnown RBP26.53■■□□□ 1.84
SPPL2B-214ENST00000622308 MYO5BQ9ULV0 1848 aa26.52■■□□□ 1.84
SPPL2B-214ENST00000622308 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
SPPL2B-214ENST00000622308 E9PCH4 1651 aa26.47■■□□□ 1.83
SPPL2B-214ENST00000622308 PHLPP1O60346 1717 aa26.47■■□□□ 1.83
SPPL2B-214ENST00000622308 PIK3R4Q99570 1358 aa26.46■■□□□ 1.83
SPPL2B-214ENST00000622308 C19orf44Q9H6X5 657 aa26.46■■□□□ 1.83
SPPL2B-214ENST00000622308 COL16A1Q07092 1604 aaPredicted RBP26.45■■□□□ 1.82
SPPL2B-214ENST00000622308 C14orf37Q86TY3 774 aa26.44■■□□□ 1.82
SPPL2B-214ENST00000622308 PTPRUQ92729 1446 aa26.44■■□□□ 1.82
SPPL2B-214ENST00000622308 NUP155O75694 1391 aa26.44■■□□□ 1.82
SPPL2B-214ENST00000622308 IQGAP3Q86VI3 1631 aa26.43■■□□□ 1.82
SPPL2B-214ENST00000622308 CADPS2Q86UW7 1296 aa26.43■■□□□ 1.82
SPPL2B-214ENST00000622308 DIP2AQ14689 1571 aa26.42■■□□□ 1.82
SPPL2B-214ENST00000622308 AMOTL2Q9Y2J4 779 aa26.42■■□□□ 1.82
SPPL2B-214ENST00000622308 LRP6O75581 1613 aa26.42■■□□□ 1.82
SPPL2B-214ENST00000622308 SPATA31A6Q5VVP1 1343 aa26.39■■□□□ 1.82
SPPL2B-214ENST00000622308 ATF3P18847 181 aa26.39■■□□□ 1.82
SPPL2B-214ENST00000622308 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.37■■□□□ 1.81
SPPL2B-214ENST00000622308 AHDC1Q5TGY3 1603 aaPredicted RBP26.36■■□□□ 1.81
SPPL2B-214ENST00000622308 ITGAEP38570 1179 aa26.36■■□□□ 1.81
SPPL2B-214ENST00000622308 BRINP3Q76B58 766 aa26.36■■□□□ 1.81
SPPL2B-214ENST00000622308 TRPM2O94759 1503 aa26.35■■□□□ 1.81
SPPL2B-214ENST00000622308 SETD1AO15047 1707 aaKnown RBP26.31■■□□□ 1.8
SPPL2B-214ENST00000622308 NRXN3Q9Y4C0 1643 aa26.3■■□□□ 1.8
SPPL2B-214ENST00000622308 METP08581 1390 aa26.3■■□□□ 1.8
SPPL2B-214ENST00000622308 MEX3CQ5U5Q3 659 aaKnown RBP26.29■■□□□ 1.8
SPPL2B-214ENST00000622308 ZNF772Q68DY9 489 aaPredicted RBP26.29■■□□□ 1.8
SPPL2B-214ENST00000622308 DCCP43146 1447 aa26.29■■□□□ 1.8
SPPL2B-214ENST00000622308 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
SPPL2B-214ENST00000622308 PPARGC1BQ86YN6 1023 aaKnown RBP26.27■■□□□ 1.8
SPPL2B-214ENST00000622308 XRN1Q8IZH2 1706 aaKnown RBP26.26■■□□□ 1.79
SPPL2B-214ENST00000622308 MST1RQ04912 1400 aa26.26■■□□□ 1.79
SPPL2B-214ENST00000622308 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
SPPL2B-214ENST00000622308 ZNF326Q5BKZ1 582 aaKnown RBP26.24■■□□□ 1.79
SPPL2B-214ENST00000622308 ASXL1Q8IXJ9 1541 aa26.24■■□□□ 1.79
SPPL2B-214ENST00000622308 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
SPPL2B-214ENST00000622308 UPF1Q92900 1129 aaKnown RBP eCLIP26.22■■□□□ 1.79
SPPL2B-214ENST00000622308 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
SPPL2B-214ENST00000622308 NUTM2BA6NNL0 878 aaPredicted RBP26.21■■□□□ 1.79
SPPL2B-214ENST00000622308 NUTM2EB1AL46 878 aaPredicted RBP26.21■■□□□ 1.79
SPPL2B-214ENST00000622308 NUTM2AQ8IVF1 878 aaPredicted RBP26.21■■□□□ 1.79
SPPL2B-214ENST00000622308 SPHKAPQ2M3C7 1700 aa26.19■■□□□ 1.78
SPPL2B-214ENST00000622308 DDX17Q92841 729 aaKnown RBP26.18■■□□□ 1.78
SPPL2B-214ENST00000622308 ADGRL3Q9HAR2 1447 aa26.17■■□□□ 1.78
SPPL2B-214ENST00000622308 RXRBP28702 533 aa26.17■■□□□ 1.78
SPPL2B-214ENST00000622308 NEXMIFQ5QGS0 1516 aa26.17■■□□□ 1.78
SPPL2B-214ENST00000622308 LRRC59Q96AG4 307 aaKnown RBP26.15■■□□□ 1.78
SPPL2B-214ENST00000622308 AFF2P51816 1311 aa26.14■■□□□ 1.78
SPPL2B-214ENST00000622308 CLTCL1P53675 1640 aa26.14■■□□□ 1.78
SPPL2B-214ENST00000622308 NHSL1Q5SYE7 1610 aa26.13■■□□□ 1.77
SPPL2B-214ENST00000622308 PNPLA6Q8IY17 1366 aa26.11■■□□□ 1.77
SPPL2B-214ENST00000622308 NAIPQ13075 1403 aa26.11■■□□□ 1.77
SPPL2B-214ENST00000622308 CDK12Q9NYV4 1490 aaPredicted RBP26.11■■□□□ 1.77
SPPL2B-214ENST00000622308 C1orf167Q5SNV9 1468 aa26.09■■□□□ 1.77
SPPL2B-214ENST00000622308 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
SPPL2B-214ENST00000622308 ROBO2Q9HCK4 1378 aa26.07■■□□□ 1.76
SPPL2B-214ENST00000622308 NALCNQ8IZF0 1738 aa26.06■■□□□ 1.76
SPPL2B-214ENST00000622308 C8orf37Q96NL8 207 aa26.06■■□□□ 1.76
SPPL2B-214ENST00000622308 PTCH1Q13635 1447 aa26.05■■□□□ 1.76
SPPL2B-214ENST00000622308 VGFO15240 615 aaPredicted RBP26.04■■□□□ 1.76
SPPL2B-214ENST00000622308 QTRT2Q9H974 415 aaKnown RBP26.04■■□□□ 1.76
SPPL2B-214ENST00000622308 ORAI2Q96SN7 254 aa26.03■■□□□ 1.76
SPPL2B-214ENST00000622308 RGS12O14924 1447 aa26.01■■□□□ 1.75
SPPL2B-214ENST00000622308 SOS2Q07890 1332 aaPredicted RBP26.01■■□□□ 1.75
SPPL2B-214ENST00000622308 PRAG1Q86YV5 1406 aa26.01■■□□□ 1.75
SPPL2B-214ENST00000622308 RBM6P78332 1123 aaKnown RBP26■■□□□ 1.75
SPPL2B-214ENST00000622308 RPGRIP1LQ68CZ1 1315 aa25.99■■□□□ 1.75
SPPL2B-214ENST00000622308 ADAMTS2O95450 1211 aa25.99■■□□□ 1.75
SPPL2B-214ENST00000622308 LAMC1P11047 1609 aa25.98■■□□□ 1.75
SPPL2B-214ENST00000622308 NGLY1Q96IV0 654 aa25.96■■□□□ 1.75
SPPL2B-214ENST00000622308 HFM1A2PYH4 1435 aa25.96■■□□□ 1.75
SPPL2B-214ENST00000622308 KIF1BO60333 1816 aa25.95■■□□□ 1.74
SPPL2B-214ENST00000622308 SLC4A1APQ9BWU0 796 aaKnown RBP25.94■■□□□ 1.74
SPPL2B-214ENST00000622308 FNBP4Q8N3X1 1017 aaPredicted RBP25.9■■□□□ 1.74
SPPL2B-214ENST00000622308 FOXD1Q16676 465 aa25.88■■□□□ 1.73
SPPL2B-214ENST00000622308 USP21Q9UK80 565 aa25.88■■□□□ 1.73
SPPL2B-214ENST00000622308 ADGRF5Q8IZF2 1346 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms