RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ANKRD20A12PQ8NF67 263 aa14.09□□□□□ -0.15
CLTC-215ENST00000621829 VPS37CA5D8V6 355 aaPredicted RBP14.09□□□□□ -0.15
CLTC-215ENST00000621829 CT47B1P0C2W7 299 aaPredicted RBP14.09□□□□□ -0.15
CLTC-215ENST00000621829 NUCB2P80303 420 aa14.09□□□□□ -0.15
CLTC-215ENST00000621829 TRIM5Q9C035 493 aa14.09□□□□□ -0.15
CLTC-215ENST00000621829 TNNT1P13805 278 aa14.08□□□□□ -0.16
CLTC-215ENST00000621829 ZNF330Q9Y3S2 320 aaPredicted RBP14.08□□□□□ -0.16
CLTC-215ENST00000621829 PDE3BQ13370 1112 aa14.08□□□□□ -0.16
CLTC-215ENST00000621829 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
CLTC-215ENST00000621829 TSPY26PQ9H489 355 aa14.07□□□□□ -0.16
CLTC-215ENST00000621829 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
CLTC-215ENST00000621829 RRP7AQ9Y3A4 280 aaKnown RBP14.07□□□□□ -0.16
CLTC-215ENST00000621829 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
CLTC-215ENST00000621829 C22orf23Q9BZE7 217 aa14.06□□□□□ -0.16
CLTC-215ENST00000621829 IPO4Q8TEX9 1081 aaKnown RBP14.06□□□□□ -0.16
CLTC-215ENST00000621829 STK31Q9BXU1 1019 aa14.06□□□□□ -0.16
CLTC-215ENST00000621829 ABCC9O60706 1549 aa14.06□□□□□ -0.16
CLTC-215ENST00000621829 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
CLTC-215ENST00000621829 ANO2Q9NQ90 1003 aa14.06□□□□□ -0.16
CLTC-215ENST00000621829 USP8P40818 1118 aa14.05□□□□□ -0.16
CLTC-215ENST00000621829 BBXQ8WY36 941 aaPredicted RBP14.05□□□□□ -0.16
CLTC-215ENST00000621829 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
CLTC-215ENST00000621829 GRPEL1Q9HAV7 217 aa14.05□□□□□ -0.16
CLTC-215ENST00000621829 HOOK1Q9UJC3 728 aaKnown RBP14.05□□□□□ -0.16
CLTC-215ENST00000621829 ZBED9Q6R2W3 1325 aa14.05□□□□□ -0.16
CLTC-215ENST00000621829 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
CLTC-215ENST00000621829 SMC2O95347 1197 aa14.04□□□□□ -0.16
CLTC-215ENST00000621829 SMC3Q9UQE7 1217 aa14.03□□□□□ -0.16
CLTC-215ENST00000621829 FAM193AP78312 1265 aa14.03□□□□□ -0.16
CLTC-215ENST00000621829 PDCL2Q8N4E4 241 aa14.03□□□□□ -0.16
CLTC-215ENST00000621829 RSPH4AQ5TD94 716 aa14.03□□□□□ -0.16
CLTC-215ENST00000621829 REC8O95072 547 aa14.03□□□□□ -0.16
CLTC-215ENST00000621829 AKAP17AQ02040 695 aaKnown RBP14.03□□□□□ -0.16
CLTC-215ENST00000621829 CCDC27Q2M243 656 aa14.02□□□□□ -0.16
CLTC-215ENST00000621829 NAT10Q9H0A0 1025 aaKnown RBP14.02□□□□□ -0.16
CLTC-215ENST00000621829 ESPNB1AK53 854 aa14.02□□□□□ -0.17
CLTC-215ENST00000621829 PRPF40AO75400 957 aaKnown RBP14.02□□□□□ -0.17
CLTC-215ENST00000621829 CCDC112Q8NEF3 446 aa14.02□□□□□ -0.17
CLTC-215ENST00000621829 HSP90AB2PQ58FF8 381 aa14.01□□□□□ -0.17
CLTC-215ENST00000621829 FAM177A1Q8N128 213 aaPredicted RBP14.01□□□□□ -0.17
CLTC-215ENST00000621829 TRIM29Q14134 588 aa14.01□□□□□ -0.17
CLTC-215ENST00000621829 CCDC73Q6ZRK6 1079 aa14□□□□□ -0.17
CLTC-215ENST00000621829 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
CLTC-215ENST00000621829 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
CLTC-215ENST00000621829 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
CLTC-215ENST00000621829 GOLGA6L7A0A1B0GV03 622 aa13.99□□□□□ -0.17
CLTC-215ENST00000621829 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
CLTC-215ENST00000621829 ZRSR2Q15696 482 aaKnown RBP13.99□□□□□ -0.17
CLTC-215ENST00000621829 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
CLTC-215ENST00000621829 GOLGA6L10A6NI86 522 aa13.98□□□□□ -0.17
CLTC-215ENST00000621829 PDCL3Q9H2J4 239 aa13.98□□□□□ -0.17
CLTC-215ENST00000621829 STK26Q9P289 416 aa13.98□□□□□ -0.17
CLTC-215ENST00000621829 LETM1O95202 739 aaPredicted RBP13.98□□□□□ -0.17
CLTC-215ENST00000621829 FMNL2Q96PY5 1086 aa13.98□□□□□ -0.17
CLTC-215ENST00000621829 PLEKHD1A6NEE1 506 aa13.97□□□□□ -0.17
CLTC-215ENST00000621829 CT47A1Q5JQC4 288 aaPredicted RBP13.97□□□□□ -0.17
CLTC-215ENST00000621829 EIF3JO75822 258 aaKnown RBP13.97□□□□□ -0.17
CLTC-215ENST00000621829 CLASRPQ8N2M8 674 aaKnown RBP13.97□□□□□ -0.17
CLTC-215ENST00000621829 ENOX2Q16206 610 aaKnown RBP13.97□□□□□ -0.17
CLTC-215ENST00000621829 ELL2O00472 640 aaPredicted RBP13.96□□□□□ -0.17
CLTC-215ENST00000621829 ODF2Q5BJF6 829 aa13.96□□□□□ -0.17
CLTC-215ENST00000621829 CCDC102AQ96A19 550 aa13.96□□□□□ -0.17
CLTC-215ENST00000621829 ZKSCAN2Q63HK3 967 aa13.96□□□□□ -0.17
CLTC-215ENST00000621829 RAB3GAP2Q9H2M9 1393 aa13.96□□□□□ -0.17
CLTC-215ENST00000621829 PHLDB1Q86UU1 1377 aa13.96□□□□□ -0.17
CLTC-215ENST00000621829 CCP110O43303 1012 aa13.96□□□□□ -0.18
CLTC-215ENST00000621829 ZKSCAN1P17029 563 aaPredicted RBP13.96□□□□□ -0.18
CLTC-215ENST00000621829 TRIM34Q9BYJ4 488 aa13.96□□□□□ -0.18
CLTC-215ENST00000621829 MYO6Q9UM54 1294 aa13.96□□□□□ -0.18
CLTC-215ENST00000621829 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
CLTC-215ENST00000621829 CCDC47Q96A33 483 aaKnown RBP13.95□□□□□ -0.18
CLTC-215ENST00000621829 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
CLTC-215ENST00000621829 CALCOCO1Q9P1Z2 691 aa13.95□□□□□ -0.18
CLTC-215ENST00000621829 NEFHP12036 1026 aa13.95□□□□□ -0.18
CLTC-215ENST00000621829 SDF4Q9BRK5 362 aa13.95□□□□□ -0.18
CLTC-215ENST00000621829 SYNE3Q6ZMZ3 975 aa13.95□□□□□ -0.18
CLTC-215ENST00000621829 KIF15Q9NS87 1388 aa13.95□□□□□ -0.18
CLTC-215ENST00000621829 CPLX1O14810 134 aa13.95□□□□□ -0.18
CLTC-215ENST00000621829 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
CLTC-215ENST00000621829 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
CLTC-215ENST00000621829 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
CLTC-215ENST00000621829 INTS3Q68E01 1043 aaKnown RBP13.94□□□□□ -0.18
CLTC-215ENST00000621829 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
CLTC-215ENST00000621829 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
CLTC-215ENST00000621829 LRRCC1Q9C099 1032 aa13.94□□□□□ -0.18
CLTC-215ENST00000621829 ZFYVE27Q5T4F4 411 aa13.94□□□□□ -0.18
CLTC-215ENST00000621829 LNPKQ9C0E8 428 aa13.94□□□□□ -0.18
CLTC-215ENST00000621829 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
CLTC-215ENST00000621829 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
CLTC-215ENST00000621829 TAX1BP1Q86VP1 789 aa13.93□□□□□ -0.18
CLTC-215ENST00000621829 EPS15P42566 896 aa13.93□□□□□ -0.18
CLTC-215ENST00000621829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.18
CLTC-215ENST00000621829 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
CLTC-215ENST00000621829 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
CLTC-215ENST00000621829 ANKRD62A6NC57 917 aa13.92□□□□□ -0.18
CLTC-215ENST00000621829 POLR3GO15318 223 aaPredicted RBP13.92□□□□□ -0.18
CLTC-215ENST00000621829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.183e-6■■■■■ 33.4
CLTC-215ENST00000621829 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
CLTC-215ENST00000621829 PPP4R3BQ5MIZ7 849 aa13.92□□□□□ -0.18
CLTC-215ENST00000621829 MBD3O95983 291 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms