RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 RRBP1Q9P2E9 1410 aaKnown RBP36.48■■■■□ 3.43
ATXN3-253ENST00000621269 KCNA6P17658 529 aa36.47■■■■□ 3.43
ATXN3-253ENST00000621269 TMEM131LA2VDJ0 1609 aa36.46■■■■□ 3.43
ATXN3-253ENST00000621269 RIMS2Q9UQ26 1411 aa36.45■■■■□ 3.43
ATXN3-253ENST00000621269 ZFYVE9O95405 1425 aa36.44■■■■□ 3.42
ATXN3-253ENST00000621269 SENP3Q9H4L4 574 aaPredicted RBP36.43■■■■□ 3.42
ATXN3-253ENST00000621269 ILDR2Q71H61 639 aa36.42■■■■□ 3.42
ATXN3-253ENST00000621269 PLEKHG1Q9ULL1 1385 aa36.41■■■■□ 3.42
ATXN3-253ENST00000621269 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.41■■■■□ 3.42
ATXN3-253ENST00000621269 MYO5BQ9ULV0 1848 aa36.41■■■■□ 3.42
ATXN3-253ENST00000621269 PROSER2Q86WR7 435 aaPredicted RBP36.39■■■■□ 3.42
ATXN3-253ENST00000621269 TMEM94Q12767 1356 aa36.38■■■■□ 3.41
ATXN3-253ENST00000621269 XIRP1Q702N8 1843 aaKnown RBP36.35■■■■□ 3.41
ATXN3-253ENST00000621269 NUTM2DQ5VT03 806 aaPredicted RBP36.31■■■■□ 3.4
ATXN3-253ENST00000621269 NKTRP30414 1462 aaKnown RBP36.31■■■■□ 3.4
ATXN3-253ENST00000621269 NAIPQ13075 1403 aa36.3■■■■□ 3.4
ATXN3-253ENST00000621269 NWD1Q149M9 1564 aa36.3■■■■□ 3.4
ATXN3-253ENST00000621269 RBM33Q96EV2 1170 aaKnown RBP36.29■■■■□ 3.4
ATXN3-253ENST00000621269 TBX22Q9Y458 520 aa36.29■■■■□ 3.4
ATXN3-253ENST00000621269 SPHKAPQ2M3C7 1700 aa36.23■■■■□ 3.39
ATXN3-253ENST00000621269 MED1Q15648 1581 aaPredicted RBP36.22■■■■□ 3.39
ATXN3-253ENST00000621269 MSH6P52701 1360 aa36.19■■■■□ 3.38
ATXN3-253ENST00000621269 SOCS7O14512 581 aa36.19■■■■□ 3.38
ATXN3-253ENST00000621269 ZNF326Q5BKZ1 582 aaKnown RBP36.19■■■■□ 3.38
ATXN3-253ENST00000621269 TRIM52Q96A61 297 aa36.19■■■■□ 3.38
ATXN3-253ENST00000621269 CHD2O14647 1828 aaKnown RBP36.19■■■■□ 3.38
ATXN3-253ENST00000621269 HFM1A2PYH4 1435 aa36.18■■■■□ 3.38
ATXN3-253ENST00000621269 FAM135BQ49AJ0 1406 aa36.18■■■■□ 3.38
ATXN3-253ENST00000621269 ADAMTS13Q76LX8 1427 aa36.18■■■■□ 3.38
ATXN3-253ENST00000621269 DIP2AQ14689 1571 aa36.17■■■■□ 3.38
ATXN3-253ENST00000621269 PIK3R4Q99570 1358 aa36.15■■■■□ 3.38
ATXN3-253ENST00000621269 C14orf37Q86TY3 774 aa36.1■■■■□ 3.37
ATXN3-253ENST00000621269 TRPM2O94759 1503 aa36.09■■■■□ 3.37
ATXN3-253ENST00000621269 PHF23Q9BUL5 403 aaPredicted RBP36.09■■■■□ 3.37
ATXN3-253ENST00000621269 NCOA3Q9Y6Q9 1424 aa36.08■■■■□ 3.37
ATXN3-253ENST00000621269 SLAIN2Q9P270 581 aa36.08■■■■□ 3.37
ATXN3-253ENST00000621269 CLTCL1P53675 1640 aa36.07■■■■□ 3.36
ATXN3-253ENST00000621269 SLC4A1APQ9BWU0 796 aaKnown RBP36.06■■■■□ 3.36
ATXN3-253ENST00000621269 ROBO1Q9Y6N7 1651 aa36.05■■■■□ 3.36
ATXN3-253ENST00000621269 AMOTL2Q9Y2J4 779 aa36.05■■■■□ 3.36
ATXN3-253ENST00000621269 SETBP1Q9Y6X0 1596 aa36.01■■■■□ 3.35
ATXN3-253ENST00000621269 C19orf44Q9H6X5 657 aa35.98■■■■□ 3.35
ATXN3-253ENST00000621269 PTPRUQ92729 1446 aa35.98■■■■□ 3.35
ATXN3-253ENST00000621269 NRXN3Q9Y4C0 1643 aa35.97■■■■□ 3.35
ATXN3-253ENST00000621269 KIF1BO60333 1816 aa35.97■■■■□ 3.35
ATXN3-253ENST00000621269 ATF3P18847 181 aa35.96■■■■□ 3.35
ATXN3-253ENST00000621269 NEXMIFQ5QGS0 1516 aa35.95■■■■□ 3.35
ATXN3-253ENST00000621269 CADPS2Q86UW7 1296 aa35.95■■■■□ 3.35
ATXN3-253ENST00000621269 METP08581 1390 aa35.9■■■■□ 3.34
ATXN3-253ENST00000621269 VGFO15240 615 aaPredicted RBP35.9■■■■□ 3.34
ATXN3-253ENST00000621269 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.88■■■■□ 3.34
ATXN3-253ENST00000621269 RPGRIP1LQ68CZ1 1315 aa35.86■■■■□ 3.33
ATXN3-253ENST00000621269 XRN1Q8IZH2 1706 aaKnown RBP35.86■■■■□ 3.33
ATXN3-253ENST00000621269 FOXD1Q16676 465 aa35.85■■■■□ 3.33
ATXN3-253ENST00000621269 PHLPP1O60346 1717 aa35.85■■■■□ 3.33
ATXN3-253ENST00000621269 MPHOSPH9Q99550 1183 aa35.8■■■■□ 3.32
ATXN3-253ENST00000621269 DCCP43146 1447 aa35.79■■■■□ 3.32
ATXN3-253ENST00000621269 JCADQ9P266 1359 aa35.78■■■■□ 3.32
ATXN3-253ENST00000621269 CCDC144AA2RUR9 1427 aa35.76■■■■□ 3.32
ATXN3-253ENST00000621269 ACIN1Q9UKV3 1341 aaKnown RBP35.76■■■■□ 3.31
ATXN3-253ENST00000621269 RGS17Q9UGC6 210 aaPredicted RBP35.74■■■■□ 3.31
ATXN3-253ENST00000621269 COL16A1Q07092 1604 aaPredicted RBP35.72■■■■□ 3.31
ATXN3-253ENST00000621269 BRINP3Q76B58 766 aa35.71■■■■□ 3.31
ATXN3-253ENST00000621269 PPLO60437 1756 aa35.69■■■■□ 3.3
ATXN3-253ENST00000621269 SETD5Q9C0A6 1442 aa35.69■■■■□ 3.3
ATXN3-253ENST00000621269 ADGRL3Q9HAR2 1447 aa35.69■■■■□ 3.3
ATXN3-253ENST00000621269 AHDC1Q5TGY3 1603 aaPredicted RBP35.68■■■■□ 3.3
ATXN3-253ENST00000621269 RGL3Q3MIN7 710 aa35.68■■■■□ 3.3
ATXN3-253ENST00000621269 MST1RQ04912 1400 aa35.66■■■■□ 3.3
ATXN3-253ENST00000621269 SETD1AO15047 1707 aaKnown RBP35.64■■■■□ 3.3
ATXN3-253ENST00000621269 PTCH1Q13635 1447 aa35.64■■■■□ 3.3
ATXN3-253ENST00000621269 SPATA31A6Q5VVP1 1343 aa35.62■■■■□ 3.29
ATXN3-253ENST00000621269 ASXL1Q8IXJ9 1541 aa35.62■■■■□ 3.29
ATXN3-253ENST00000621269 SPATA31E1Q6ZUB1 1445 aa35.61■■■■□ 3.29
ATXN3-253ENST00000621269 ROBO2Q9HCK4 1378 aa35.61■■■■□ 3.29
ATXN3-253ENST00000621269 NALCNQ8IZF0 1738 aa35.6■■■■□ 3.29
ATXN3-253ENST00000621269 ADGRF5Q8IZF2 1346 aa35.59■■■■□ 3.29
ATXN3-253ENST00000621269 ANKRD30BQ9BXX2 1392 aa35.59■■■■□ 3.29
ATXN3-253ENST00000621269 POTEAQ6S8J7 498 aa35.56■■■■□ 3.28
ATXN3-253ENST00000621269 PRAG1Q86YV5 1406 aa35.56■■■■□ 3.28
ATXN3-253ENST00000621269 MEX3CQ5U5Q3 659 aaKnown RBP35.55■■■■□ 3.28
ATXN3-253ENST00000621269 RAB3GAP2Q9H2M9 1393 aa35.53■■■■□ 3.28
ATXN3-253ENST00000621269 SHPRHQ149N8 1683 aa35.52■■■■□ 3.28
ATXN3-253ENST00000621269 C1orf167Q5SNV9 1468 aa35.49■■■■□ 3.27
ATXN3-253ENST00000621269 LRRC59Q96AG4 307 aaKnown RBP35.49■■■■□ 3.27
ATXN3-253ENST00000621269 LRP6O75581 1613 aa35.49■■■■□ 3.27
ATXN3-253ENST00000621269 NHSL1Q5SYE7 1610 aa35.49■■■■□ 3.27
ATXN3-253ENST00000621269 IFT172Q9UG01 1749 aa35.48■■■■□ 3.27
ATXN3-253ENST00000621269 STK26Q9P289 416 aa35.47■■■■□ 3.27
ATXN3-253ENST00000621269 DDX17Q92841 729 aaKnown RBP35.46■■■■□ 3.27
ATXN3-253ENST00000621269 NUTM2BA6NNL0 878 aaPredicted RBP35.45■■■■□ 3.27
ATXN3-253ENST00000621269 NUTM2EB1AL46 878 aaPredicted RBP35.45■■■■□ 3.27
ATXN3-253ENST00000621269 NUTM2AQ8IVF1 878 aaPredicted RBP35.45■■■■□ 3.27
ATXN3-253ENST00000621269 PIK3C2GO75747 1445 aa35.43■■■■□ 3.26
ATXN3-253ENST00000621269 LRPPRCP42704 1394 aaKnown RBP35.41■■■■□ 3.26
ATXN3-253ENST00000621269 TMEM132EQ6IEE7 984 aa35.41■■■■□ 3.26
ATXN3-253ENST00000621269 ORAI2Q96SN7 254 aa35.41■■■■□ 3.26
ATXN3-253ENST00000621269 ZNF772Q68DY9 489 aaPredicted RBP35.4■■■■□ 3.26
ATXN3-253ENST00000621269 TECPR2O15040 1411 aa35.38■■■■□ 3.25
ATXN3-253ENST00000621269 ABCC11Q96J66 1382 aa35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms