RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 RRBP1Q9P2E9 1410 aaKnown RBP36.48■■■■□ 3.43
ATXN3-252ENST00000620536 KCNA6P17658 529 aa36.47■■■■□ 3.43
ATXN3-252ENST00000620536 TMEM131LA2VDJ0 1609 aa36.46■■■■□ 3.43
ATXN3-252ENST00000620536 RIMS2Q9UQ26 1411 aa36.45■■■■□ 3.43
ATXN3-252ENST00000620536 ZFYVE9O95405 1425 aa36.44■■■■□ 3.42
ATXN3-252ENST00000620536 SENP3Q9H4L4 574 aaPredicted RBP36.43■■■■□ 3.42
ATXN3-252ENST00000620536 ILDR2Q71H61 639 aa36.42■■■■□ 3.42
ATXN3-252ENST00000620536 PLEKHG1Q9ULL1 1385 aa36.41■■■■□ 3.42
ATXN3-252ENST00000620536 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.41■■■■□ 3.42
ATXN3-252ENST00000620536 MYO5BQ9ULV0 1848 aa36.41■■■■□ 3.42
ATXN3-252ENST00000620536 PROSER2Q86WR7 435 aaPredicted RBP36.39■■■■□ 3.42
ATXN3-252ENST00000620536 TMEM94Q12767 1356 aa36.38■■■■□ 3.41
ATXN3-252ENST00000620536 XIRP1Q702N8 1843 aaKnown RBP36.35■■■■□ 3.41
ATXN3-252ENST00000620536 NUTM2DQ5VT03 806 aaPredicted RBP36.31■■■■□ 3.4
ATXN3-252ENST00000620536 NKTRP30414 1462 aaKnown RBP36.31■■■■□ 3.4
ATXN3-252ENST00000620536 NAIPQ13075 1403 aa36.3■■■■□ 3.4
ATXN3-252ENST00000620536 NWD1Q149M9 1564 aa36.3■■■■□ 3.4
ATXN3-252ENST00000620536 RBM33Q96EV2 1170 aaKnown RBP36.29■■■■□ 3.4
ATXN3-252ENST00000620536 TBX22Q9Y458 520 aa36.29■■■■□ 3.4
ATXN3-252ENST00000620536 SPHKAPQ2M3C7 1700 aa36.23■■■■□ 3.39
ATXN3-252ENST00000620536 MED1Q15648 1581 aaPredicted RBP36.22■■■■□ 3.39
ATXN3-252ENST00000620536 MSH6P52701 1360 aa36.19■■■■□ 3.38
ATXN3-252ENST00000620536 SOCS7O14512 581 aa36.19■■■■□ 3.38
ATXN3-252ENST00000620536 ZNF326Q5BKZ1 582 aaKnown RBP36.19■■■■□ 3.38
ATXN3-252ENST00000620536 TRIM52Q96A61 297 aa36.19■■■■□ 3.38
ATXN3-252ENST00000620536 CHD2O14647 1828 aaKnown RBP36.19■■■■□ 3.38
ATXN3-252ENST00000620536 HFM1A2PYH4 1435 aa36.18■■■■□ 3.38
ATXN3-252ENST00000620536 FAM135BQ49AJ0 1406 aa36.18■■■■□ 3.38
ATXN3-252ENST00000620536 ADAMTS13Q76LX8 1427 aa36.18■■■■□ 3.38
ATXN3-252ENST00000620536 DIP2AQ14689 1571 aa36.17■■■■□ 3.38
ATXN3-252ENST00000620536 PIK3R4Q99570 1358 aa36.15■■■■□ 3.38
ATXN3-252ENST00000620536 C14orf37Q86TY3 774 aa36.1■■■■□ 3.37
ATXN3-252ENST00000620536 TRPM2O94759 1503 aa36.09■■■■□ 3.37
ATXN3-252ENST00000620536 PHF23Q9BUL5 403 aaPredicted RBP36.09■■■■□ 3.37
ATXN3-252ENST00000620536 NCOA3Q9Y6Q9 1424 aa36.08■■■■□ 3.37
ATXN3-252ENST00000620536 SLAIN2Q9P270 581 aa36.08■■■■□ 3.37
ATXN3-252ENST00000620536 CLTCL1P53675 1640 aa36.07■■■■□ 3.36
ATXN3-252ENST00000620536 SLC4A1APQ9BWU0 796 aaKnown RBP36.06■■■■□ 3.36
ATXN3-252ENST00000620536 ROBO1Q9Y6N7 1651 aa36.05■■■■□ 3.36
ATXN3-252ENST00000620536 AMOTL2Q9Y2J4 779 aa36.05■■■■□ 3.36
ATXN3-252ENST00000620536 SETBP1Q9Y6X0 1596 aa36.01■■■■□ 3.35
ATXN3-252ENST00000620536 C19orf44Q9H6X5 657 aa35.98■■■■□ 3.35
ATXN3-252ENST00000620536 PTPRUQ92729 1446 aa35.98■■■■□ 3.35
ATXN3-252ENST00000620536 NRXN3Q9Y4C0 1643 aa35.97■■■■□ 3.35
ATXN3-252ENST00000620536 KIF1BO60333 1816 aa35.97■■■■□ 3.35
ATXN3-252ENST00000620536 ATF3P18847 181 aa35.96■■■■□ 3.35
ATXN3-252ENST00000620536 NEXMIFQ5QGS0 1516 aa35.95■■■■□ 3.35
ATXN3-252ENST00000620536 CADPS2Q86UW7 1296 aa35.95■■■■□ 3.35
ATXN3-252ENST00000620536 METP08581 1390 aa35.9■■■■□ 3.34
ATXN3-252ENST00000620536 VGFO15240 615 aaPredicted RBP35.9■■■■□ 3.34
ATXN3-252ENST00000620536 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.88■■■■□ 3.34
ATXN3-252ENST00000620536 RPGRIP1LQ68CZ1 1315 aa35.86■■■■□ 3.33
ATXN3-252ENST00000620536 XRN1Q8IZH2 1706 aaKnown RBP35.86■■■■□ 3.33
ATXN3-252ENST00000620536 FOXD1Q16676 465 aa35.85■■■■□ 3.33
ATXN3-252ENST00000620536 PHLPP1O60346 1717 aa35.85■■■■□ 3.33
ATXN3-252ENST00000620536 MPHOSPH9Q99550 1183 aa35.8■■■■□ 3.32
ATXN3-252ENST00000620536 DCCP43146 1447 aa35.79■■■■□ 3.32
ATXN3-252ENST00000620536 JCADQ9P266 1359 aa35.78■■■■□ 3.32
ATXN3-252ENST00000620536 CCDC144AA2RUR9 1427 aa35.76■■■■□ 3.32
ATXN3-252ENST00000620536 ACIN1Q9UKV3 1341 aaKnown RBP35.76■■■■□ 3.31
ATXN3-252ENST00000620536 RGS17Q9UGC6 210 aaPredicted RBP35.74■■■■□ 3.31
ATXN3-252ENST00000620536 COL16A1Q07092 1604 aaPredicted RBP35.72■■■■□ 3.31
ATXN3-252ENST00000620536 BRINP3Q76B58 766 aa35.71■■■■□ 3.31
ATXN3-252ENST00000620536 PPLO60437 1756 aa35.69■■■■□ 3.3
ATXN3-252ENST00000620536 SETD5Q9C0A6 1442 aa35.69■■■■□ 3.3
ATXN3-252ENST00000620536 ADGRL3Q9HAR2 1447 aa35.69■■■■□ 3.3
ATXN3-252ENST00000620536 AHDC1Q5TGY3 1603 aaPredicted RBP35.68■■■■□ 3.3
ATXN3-252ENST00000620536 RGL3Q3MIN7 710 aa35.68■■■■□ 3.3
ATXN3-252ENST00000620536 MST1RQ04912 1400 aa35.66■■■■□ 3.3
ATXN3-252ENST00000620536 SETD1AO15047 1707 aaKnown RBP35.64■■■■□ 3.3
ATXN3-252ENST00000620536 PTCH1Q13635 1447 aa35.64■■■■□ 3.3
ATXN3-252ENST00000620536 SPATA31A6Q5VVP1 1343 aa35.62■■■■□ 3.29
ATXN3-252ENST00000620536 ASXL1Q8IXJ9 1541 aa35.62■■■■□ 3.29
ATXN3-252ENST00000620536 SPATA31E1Q6ZUB1 1445 aa35.61■■■■□ 3.29
ATXN3-252ENST00000620536 ROBO2Q9HCK4 1378 aa35.61■■■■□ 3.29
ATXN3-252ENST00000620536 NALCNQ8IZF0 1738 aa35.6■■■■□ 3.29
ATXN3-252ENST00000620536 ADGRF5Q8IZF2 1346 aa35.59■■■■□ 3.29
ATXN3-252ENST00000620536 ANKRD30BQ9BXX2 1392 aa35.59■■■■□ 3.29
ATXN3-252ENST00000620536 POTEAQ6S8J7 498 aa35.56■■■■□ 3.28
ATXN3-252ENST00000620536 PRAG1Q86YV5 1406 aa35.56■■■■□ 3.28
ATXN3-252ENST00000620536 MEX3CQ5U5Q3 659 aaKnown RBP35.55■■■■□ 3.28
ATXN3-252ENST00000620536 RAB3GAP2Q9H2M9 1393 aa35.53■■■■□ 3.28
ATXN3-252ENST00000620536 SHPRHQ149N8 1683 aa35.52■■■■□ 3.28
ATXN3-252ENST00000620536 C1orf167Q5SNV9 1468 aa35.49■■■■□ 3.27
ATXN3-252ENST00000620536 LRRC59Q96AG4 307 aaKnown RBP35.49■■■■□ 3.27
ATXN3-252ENST00000620536 LRP6O75581 1613 aa35.49■■■■□ 3.27
ATXN3-252ENST00000620536 NHSL1Q5SYE7 1610 aa35.49■■■■□ 3.27
ATXN3-252ENST00000620536 IFT172Q9UG01 1749 aa35.48■■■■□ 3.27
ATXN3-252ENST00000620536 STK26Q9P289 416 aa35.47■■■■□ 3.27
ATXN3-252ENST00000620536 DDX17Q92841 729 aaKnown RBP35.46■■■■□ 3.27
ATXN3-252ENST00000620536 NUTM2BA6NNL0 878 aaPredicted RBP35.45■■■■□ 3.27
ATXN3-252ENST00000620536 NUTM2EB1AL46 878 aaPredicted RBP35.45■■■■□ 3.27
ATXN3-252ENST00000620536 NUTM2AQ8IVF1 878 aaPredicted RBP35.45■■■■□ 3.27
ATXN3-252ENST00000620536 PIK3C2GO75747 1445 aa35.43■■■■□ 3.26
ATXN3-252ENST00000620536 LRPPRCP42704 1394 aaKnown RBP35.41■■■■□ 3.26
ATXN3-252ENST00000620536 TMEM132EQ6IEE7 984 aa35.41■■■■□ 3.26
ATXN3-252ENST00000620536 ORAI2Q96SN7 254 aa35.41■■■■□ 3.26
ATXN3-252ENST00000620536 ZNF772Q68DY9 489 aaPredicted RBP35.4■■■■□ 3.26
ATXN3-252ENST00000620536 TECPR2O15040 1411 aa35.38■■■■□ 3.25
ATXN3-252ENST00000620536 ABCC11Q96J66 1382 aa35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms