RNA–Protein interactions for RNA: ENST00000620412.4

PMPCA-210, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-210ENST00000620412 SLC26A8Q96RN1 970 aa32.06■■■□□ 2.72
PMPCA-210ENST00000620412 ALKQ9UM73 1620 aa32.04■■■□□ 2.72
PMPCA-210ENST00000620412 SPHKAPQ2M3C7 1700 aa32.03■■■□□ 2.72
PMPCA-210ENST00000620412 SETD5Q9C0A6 1442 aa32.02■■■□□ 2.72
PMPCA-210ENST00000620412 BCANQ96GW7 911 aa32.02■■■□□ 2.72
PMPCA-210ENST00000620412 KCNA6P17658 529 aa31.97■■■□□ 2.71
PMPCA-210ENST00000620412 ADGRB3O60242 1522 aa31.96■■■□□ 2.71
PMPCA-210ENST00000620412 CHGAP10645 457 aaKnown RBP31.94■■■□□ 2.7
PMPCA-210ENST00000620412 RBM33Q96EV2 1170 aaKnown RBP31.94■■■□□ 2.7
PMPCA-210ENST00000620412 TRPM2O94759 1503 aa31.92■■■□□ 2.7
PMPCA-210ENST00000620412 PROSER2Q86WR7 435 aaPredicted RBP31.92■■■□□ 2.7
PMPCA-210ENST00000620412 PPP1R15AO75807 674 aaPredicted RBP31.91■■■□□ 2.7
PMPCA-210ENST00000620412 TMEM94Q12767 1356 aa31.91■■■□□ 2.7
PMPCA-210ENST00000620412 HRCP23327 699 aa31.89■■■□□ 2.7
PMPCA-210ENST00000620412 HDGFP51858 240 aaKnown RBP31.89■■■□□ 2.7
PMPCA-210ENST00000620412 RAB3GAP2Q9H2M9 1393 aa31.89■■■□□ 2.7
PMPCA-210ENST00000620412 TMEM131LA2VDJ0 1609 aa31.87■■■□□ 2.69
PMPCA-210ENST00000620412 MED1Q15648 1581 aaPredicted RBP31.86■■■□□ 2.69
PMPCA-210ENST00000620412 RIMS2Q9UQ26 1411 aa31.86■■■□□ 2.69
PMPCA-210ENST00000620412 ZFYVE9O95405 1425 aa31.84■■■□□ 2.69
PMPCA-210ENST00000620412 NUTM2DQ5VT03 806 aaPredicted RBP31.84■■■□□ 2.69
PMPCA-210ENST00000620412 TRIM52Q96A61 297 aa31.84■■■□□ 2.69
PMPCA-210ENST00000620412 PLEKHG1Q9ULL1 1385 aa31.82■■■□□ 2.69
PMPCA-210ENST00000620412 MYO5BQ9ULV0 1848 aa31.82■■■□□ 2.68
PMPCA-210ENST00000620412 PHF23Q9BUL5 403 aaPredicted RBP31.81■■■□□ 2.68
PMPCA-210ENST00000620412 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.8■■■□□ 2.68
PMPCA-210ENST00000620412 SLC4A1APQ9BWU0 796 aaKnown RBP31.8■■■□□ 2.68
PMPCA-210ENST00000620412 CLTCL1P53675 1640 aa31.79■■■□□ 2.68
PMPCA-210ENST00000620412 XIRP1Q702N8 1843 aaKnown RBP31.78■■■□□ 2.68
PMPCA-210ENST00000620412 KIF1BO60333 1816 aa31.75■■■□□ 2.67
PMPCA-210ENST00000620412 TBX22Q9Y458 520 aa31.75■■■□□ 2.67
PMPCA-210ENST00000620412 FAM135BQ49AJ0 1406 aa31.75■■■□□ 2.67
PMPCA-210ENST00000620412 MPHOSPH9Q99550 1183 aa31.72■■■□□ 2.67
PMPCA-210ENST00000620412 NKTRP30414 1462 aaKnown RBP31.72■■■□□ 2.67
PMPCA-210ENST00000620412 MSH6P52701 1360 aa31.69■■■□□ 2.66
PMPCA-210ENST00000620412 NWD1Q149M9 1564 aa31.69■■■□□ 2.66
PMPCA-210ENST00000620412 SLAIN2Q9P270 581 aa31.67■■■□□ 2.66
PMPCA-210ENST00000620412 ADAMTS13Q76LX8 1427 aa31.65■■■□□ 2.66
PMPCA-210ENST00000620412 C14orf37Q86TY3 774 aa31.64■■■□□ 2.66
PMPCA-210ENST00000620412 TRIM26Q12899 539 aaPredicted RBP31.62■■■□□ 2.65
PMPCA-210ENST00000620412 ZNF326Q5BKZ1 582 aaKnown RBP31.62■■■□□ 2.65
PMPCA-210ENST00000620412 CCDC144AA2RUR9 1427 aa31.6■■■□□ 2.65
PMPCA-210ENST00000620412 AMOTL2Q9Y2J4 779 aa31.58■■■□□ 2.65
PMPCA-210ENST00000620412 NEXMIFQ5QGS0 1516 aa31.57■■■□□ 2.64
PMPCA-210ENST00000620412 ROBO1Q9Y6N7 1651 aa31.57■■■□□ 2.64
PMPCA-210ENST00000620412 CHD2O14647 1828 aaKnown RBP31.56■■■□□ 2.64
PMPCA-210ENST00000620412 PIK3R4Q99570 1358 aa31.56■■■□□ 2.64
PMPCA-210ENST00000620412 RGS17Q9UGC6 210 aaPredicted RBP31.55■■■□□ 2.64
PMPCA-210ENST00000620412 DIP2AQ14689 1571 aa31.55■■■□□ 2.64
PMPCA-210ENST00000620412 NCOA3Q9Y6Q9 1424 aa31.52■■■□□ 2.64
PMPCA-210ENST00000620412 C19orf44Q9H6X5 657 aa31.52■■■□□ 2.64
PMPCA-210ENST00000620412 PPLO60437 1756 aa31.52■■■□□ 2.64
PMPCA-210ENST00000620412 PTPRUQ92729 1446 aa31.5■■■□□ 2.63
PMPCA-210ENST00000620412 IFT172Q9UG01 1749 aa31.5■■■□□ 2.63
PMPCA-210ENST00000620412 ATF3P18847 181 aa31.5■■■□□ 2.63
PMPCA-210ENST00000620412 FOXD1Q16676 465 aa31.5■■■□□ 2.63
PMPCA-210ENST00000620412 SETBP1Q9Y6X0 1596 aa31.5■■■□□ 2.63
PMPCA-210ENST00000620412 SPATA31E1Q6ZUB1 1445 aa31.49■■■□□ 2.63
PMPCA-210ENST00000620412 ANKRD30BQ9BXX2 1392 aa31.49■■■□□ 2.63
PMPCA-210ENST00000620412 CADPS2Q86UW7 1296 aa31.48■■■□□ 2.63
PMPCA-210ENST00000620412 RPGRIP1LQ68CZ1 1315 aa31.46■■■□□ 2.63
PMPCA-210ENST00000620412 NRXN3Q9Y4C0 1643 aa31.46■■■□□ 2.63
PMPCA-210ENST00000620412 METP08581 1390 aa31.43■■■□□ 2.62
PMPCA-210ENST00000620412 JCADQ9P266 1359 aa31.4■■■□□ 2.62
PMPCA-210ENST00000620412 POTEAQ6S8J7 498 aa31.39■■■□□ 2.62
PMPCA-210ENST00000620412 PHLPP1O60346 1717 aa31.36■■■□□ 2.61
PMPCA-210ENST00000620412 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.35■■■□□ 2.61
PMPCA-210ENST00000620412 SETD1AO15047 1707 aaKnown RBP31.35■■■□□ 2.61
PMPCA-210ENST00000620412 BRINP3Q76B58 766 aa31.34■■■□□ 2.61
PMPCA-210ENST00000620412 MYOM2P54296 1465 aa31.32■■■□□ 2.6
PMPCA-210ENST00000620412 VGFO15240 615 aaPredicted RBP31.31■■■□□ 2.6
PMPCA-210ENST00000620412 COL16A1Q07092 1604 aaPredicted RBP31.27■■■□□ 2.6
PMPCA-210ENST00000620412 NRXN1Q9ULB1 1477 aa31.27■■■□□ 2.6
PMPCA-210ENST00000620412 XRN1Q8IZH2 1706 aaKnown RBP31.27■■■□□ 2.6
PMPCA-210ENST00000620412 DCCP43146 1447 aa31.26■■■□□ 2.6
PMPCA-210ENST00000620412 DHX57Q6P158 1386 aaKnown RBP31.25■■■□□ 2.59
PMPCA-210ENST00000620412 SPATA31A6Q5VVP1 1343 aa31.24■■■□□ 2.59
PMPCA-210ENST00000620412 LAMC1P11047 1609 aa31.24■■■□□ 2.59
PMPCA-210ENST00000620412 MEX3CQ5U5Q3 659 aaKnown RBP31.24■■■□□ 2.59
PMPCA-210ENST00000620412 PIK3C2GO75747 1445 aa31.23■■■□□ 2.59
PMPCA-210ENST00000620412 PRAG1Q86YV5 1406 aa31.23■■■□□ 2.59
PMPCA-210ENST00000620412 AHDC1Q5TGY3 1603 aaPredicted RBP31.22■■■□□ 2.59
PMPCA-210ENST00000620412 MST1RQ04912 1400 aa31.22■■■□□ 2.59
PMPCA-210ENST00000620412 STAC3Q96MF2 364 aa31.21■■■□□ 2.59
PMPCA-210ENST00000620412 ADGRL3Q9HAR2 1447 aa31.19■■■□□ 2.58
PMPCA-210ENST00000620412 NUTM2BA6NNL0 878 aaPredicted RBP31.19■■■□□ 2.58
PMPCA-210ENST00000620412 NUTM2EB1AL46 878 aaPredicted RBP31.19■■■□□ 2.58
PMPCA-210ENST00000620412 NUTM2AQ8IVF1 878 aaPredicted RBP31.19■■■□□ 2.58
PMPCA-210ENST00000620412 LRP6O75581 1613 aa31.18■■■□□ 2.58
PMPCA-210ENST00000620412 DDX17Q92841 729 aaKnown RBP31.18■■■□□ 2.58
PMPCA-210ENST00000620412 ASXL1Q8IXJ9 1541 aa31.16■■■□□ 2.58
PMPCA-210ENST00000620412 RGL3Q3MIN7 710 aa31.16■■■□□ 2.58
PMPCA-210ENST00000620412 ROBO2Q9HCK4 1378 aa31.16■■■□□ 2.58
PMPCA-210ENST00000620412 LRRC59Q96AG4 307 aaKnown RBP31.12■■■□□ 2.57
PMPCA-210ENST00000620412 ADGRF5Q8IZF2 1346 aa31.12■■■□□ 2.57
PMPCA-210ENST00000620412 KNDC1Q76NI1 1749 aa31.11■■■□□ 2.57
PMPCA-210ENST00000620412 PTCH1Q13635 1447 aa31.1■■■□□ 2.57
PMPCA-210ENST00000620412 ZNF772Q68DY9 489 aaPredicted RBP31.09■■■□□ 2.57
PMPCA-210ENST00000620412 C1orf167Q5SNV9 1468 aa31.07■■■□□ 2.56
PMPCA-210ENST00000620412 ORAI2Q96SN7 254 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms