RNA–Protein interactions for RNA: ENST00000619426.4

PSMB3-211, Transcript of proteasome subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB3, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-211ENST00000619426 MED1Q15648 1581 aaPredicted RBP18.02■□□□□ 0.48
PSMB3-211ENST00000619426 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
PSMB3-211ENST00000619426 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
PSMB3-211ENST00000619426 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
PSMB3-211ENST00000619426 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
PSMB3-211ENST00000619426 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
PSMB3-211ENST00000619426 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
PSMB3-211ENST00000619426 NUP155O75694 1391 aa17.97■□□□□ 0.47
PSMB3-211ENST00000619426 TMEM94Q12767 1356 aa17.97■□□□□ 0.47
PSMB3-211ENST00000619426 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
PSMB3-211ENST00000619426 PLEKHG1Q9ULL1 1385 aa17.96■□□□□ 0.47
PSMB3-211ENST00000619426 KCNA6P17658 529 aa17.95■□□□□ 0.46
PSMB3-211ENST00000619426 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
PSMB3-211ENST00000619426 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
PSMB3-211ENST00000619426 NAIPQ13075 1403 aa17.92■□□□□ 0.46
PSMB3-211ENST00000619426 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
PSMB3-211ENST00000619426 NUTM2DQ5VT03 806 aaPredicted RBP17.92■□□□□ 0.46
PSMB3-211ENST00000619426 ROBO1Q9Y6N7 1651 aa17.92■□□□□ 0.46
PSMB3-211ENST00000619426 NRXN3Q9Y4C0 1643 aa17.91■□□□□ 0.46
PSMB3-211ENST00000619426 CLTCL1P53675 1640 aa17.9■□□□□ 0.46
PSMB3-211ENST00000619426 SOCS7O14512 581 aa17.9■□□□□ 0.46
PSMB3-211ENST00000619426 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
PSMB3-211ENST00000619426 BCANQ96GW7 911 aa17.89■□□□□ 0.45
PSMB3-211ENST00000619426 DIP2AQ14689 1571 aa17.88■□□□□ 0.45
PSMB3-211ENST00000619426 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
PSMB3-211ENST00000619426 FAM135BQ49AJ0 1406 aa17.87■□□□□ 0.45
PSMB3-211ENST00000619426 TRPM2O94759 1503 aa17.85■□□□□ 0.45
PSMB3-211ENST00000619426 PTPRUQ92729 1446 aa17.85■□□□□ 0.45
PSMB3-211ENST00000619426 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
PSMB3-211ENST00000619426 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
PSMB3-211ENST00000619426 KIF1BO60333 1816 aa17.84■□□□□ 0.45
PSMB3-211ENST00000619426 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
PSMB3-211ENST00000619426 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.45
PSMB3-211ENST00000619426 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
PSMB3-211ENST00000619426 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.44
PSMB3-211ENST00000619426 HFM1A2PYH4 1435 aa17.82■□□□□ 0.44
PSMB3-211ENST00000619426 HDGFP51858 240 aaKnown RBP17.82■□□□□ 0.44
PSMB3-211ENST00000619426 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
PSMB3-211ENST00000619426 MSH6P52701 1360 aa17.8■□□□□ 0.44
PSMB3-211ENST00000619426 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
PSMB3-211ENST00000619426 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
PSMB3-211ENST00000619426 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
PSMB3-211ENST00000619426 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
PSMB3-211ENST00000619426 RGS17Q9UGC6 210 aaPredicted RBP17.76■□□□□ 0.43
PSMB3-211ENST00000619426 METP08581 1390 aa17.76■□□□□ 0.43
PSMB3-211ENST00000619426 SLAIN2Q9P270 581 aa17.75■□□□□ 0.43
PSMB3-211ENST00000619426 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
PSMB3-211ENST00000619426 ZNF326Q5BKZ1 582 aaKnown RBP17.74■□□□□ 0.43
PSMB3-211ENST00000619426 PPLO60437 1756 aa17.74■□□□□ 0.43
PSMB3-211ENST00000619426 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
PSMB3-211ENST00000619426 NALCNQ8IZF0 1738 aa17.72■□□□□ 0.43
PSMB3-211ENST00000619426 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
PSMB3-211ENST00000619426 AHDC1Q5TGY3 1603 aaPredicted RBP17.7■□□□□ 0.42
PSMB3-211ENST00000619426 FOXD1Q16676 465 aa17.7■□□□□ 0.42
PSMB3-211ENST00000619426 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
PSMB3-211ENST00000619426 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
PSMB3-211ENST00000619426 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
PSMB3-211ENST00000619426 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
PSMB3-211ENST00000619426 SHPRHQ149N8 1683 aa17.66■□□□□ 0.42
PSMB3-211ENST00000619426 LRP6O75581 1613 aa17.65■□□□□ 0.42
PSMB3-211ENST00000619426 NHSL1Q5SYE7 1610 aa17.65■□□□□ 0.42
PSMB3-211ENST00000619426 DCCP43146 1447 aa17.65■□□□□ 0.42
PSMB3-211ENST00000619426 MST1RQ04912 1400 aa17.65■□□□□ 0.42
PSMB3-211ENST00000619426 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
PSMB3-211ENST00000619426 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
PSMB3-211ENST00000619426 ATF3P18847 181 aa17.64■□□□□ 0.41
PSMB3-211ENST00000619426 JCADQ9P266 1359 aa17.64■□□□□ 0.41
PSMB3-211ENST00000619426 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
PSMB3-211ENST00000619426 BRINP3Q76B58 766 aa17.63■□□□□ 0.41
PSMB3-211ENST00000619426 ADGRL3Q9HAR2 1447 aa17.63■□□□□ 0.41
PSMB3-211ENST00000619426 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
PSMB3-211ENST00000619426 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
PSMB3-211ENST00000619426 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
PSMB3-211ENST00000619426 PRAG1Q86YV5 1406 aa17.59■□□□□ 0.41
PSMB3-211ENST00000619426 RPGRIP1LQ68CZ1 1315 aa17.58■□□□□ 0.4
PSMB3-211ENST00000619426 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
PSMB3-211ENST00000619426 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.4
PSMB3-211ENST00000619426 ADGRF5Q8IZF2 1346 aa17.57■□□□□ 0.4
PSMB3-211ENST00000619426 DDX17Q92841 729 aaKnown RBP17.57■□□□□ 0.4
PSMB3-211ENST00000619426 CCDC144AA2RUR9 1427 aa17.56■□□□□ 0.4
PSMB3-211ENST00000619426 LAMC1P11047 1609 aa17.55■□□□□ 0.4
PSMB3-211ENST00000619426 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
PSMB3-211ENST00000619426 SETD5Q9C0A6 1442 aa17.54■□□□□ 0.4
PSMB3-211ENST00000619426 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
PSMB3-211ENST00000619426 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
PSMB3-211ENST00000619426 RGL3Q3MIN7 710 aa17.53■□□□□ 0.4
PSMB3-211ENST00000619426 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
PSMB3-211ENST00000619426 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
PSMB3-211ENST00000619426 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
PSMB3-211ENST00000619426 ORAI2Q96SN7 254 aa17.48■□□□□ 0.39
PSMB3-211ENST00000619426 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
PSMB3-211ENST00000619426 TECPR2O15040 1411 aa17.47■□□□□ 0.39
PSMB3-211ENST00000619426 ANKRD30BQ9BXX2 1392 aa17.47■□□□□ 0.39
PSMB3-211ENST00000619426 NRXN1Q9ULB1 1477 aa17.46■□□□□ 0.39
PSMB3-211ENST00000619426 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
PSMB3-211ENST00000619426 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
PSMB3-211ENST00000619426 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
PSMB3-211ENST00000619426 TMEM132EQ6IEE7 984 aa17.46■□□□□ 0.39
PSMB3-211ENST00000619426 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
PSMB3-211ENST00000619426 LRPPRCP42704 1394 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms