RNA–Protein interactions for RNA: ENST00000618570.1

UBE2NL-201, Transcript of ubiquitin conjugating enzyme E2 N like (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene UBE2NL, Length 1,185 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NL-201ENST00000618570 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
UBE2NL-201ENST00000618570 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
UBE2NL-201ENST00000618570 NECTIN2Q92692 538 aa13.97□□□□□ -0.17
UBE2NL-201ENST00000618570 APLP1P51693 650 aa13.94□□□□□ -0.18
UBE2NL-201ENST00000618570 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
UBE2NL-201ENST00000618570 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
UBE2NL-201ENST00000618570 IRF6O14896 467 aa13.89□□□□□ -0.19
UBE2NL-201ENST00000618570 KCNC4Q03721 635 aa13.89□□□□□ -0.19
UBE2NL-201ENST00000618570 TJAP1Q5JTD0 557 aa13.89□□□□□ -0.19
UBE2NL-201ENST00000618570 MINK1Q8N4C8 1332 aaPredicted RBP13.89□□□□□ -0.19
UBE2NL-201ENST00000618570 SLC10A3P09131 477 aa13.87□□□□□ -0.19
UBE2NL-201ENST00000618570 NLRP7Q8WX94 980 aa13.87□□□□□ -0.19
UBE2NL-201ENST00000618570 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
UBE2NL-201ENST00000618570 PRR14Q9BWN1 585 aa13.86□□□□□ -0.19
UBE2NL-201ENST00000618570 MTRQ99707 1265 aa13.85□□□□□ -0.19
UBE2NL-201ENST00000618570 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
UBE2NL-201ENST00000618570 A0A0G2JS52 829 aa13.83□□□□□ -0.2
UBE2NL-201ENST00000618570 ZMYND10O75800 440 aa13.82□□□□□ -0.2
UBE2NL-201ENST00000618570 IL21Q9HBE4 155 aa13.82□□□□□ -0.2
UBE2NL-201ENST00000618570 CFHP08603 1231 aa13.81□□□□□ -0.2
UBE2NL-201ENST00000618570 CCDC102AQ96A19 550 aa13.81□□□□□ -0.2
UBE2NL-201ENST00000618570 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
UBE2NL-201ENST00000618570 KMT5BQ4FZB7 885 aa13.8□□□□□ -0.2
UBE2NL-201ENST00000618570 BARGINQ6ZT62 677 aa13.8□□□□□ -0.2
UBE2NL-201ENST00000618570 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
UBE2NL-201ENST00000618570 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
UBE2NL-201ENST00000618570 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
UBE2NL-201ENST00000618570 COPS2P61201 443 aa13.77□□□□□ -0.21
UBE2NL-201ENST00000618570 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
UBE2NL-201ENST00000618570 SULF1Q8IWU6 871 aa13.76□□□□□ -0.21
UBE2NL-201ENST00000618570 BLOC1S3Q6QNY0 202 aa13.74□□□□□ -0.21
UBE2NL-201ENST00000618570 KRI1Q8N9T8 703 aaKnown RBP13.74□□□□□ -0.21
UBE2NL-201ENST00000618570 RDH13Q8NBN7 331 aa13.74□□□□□ -0.21
UBE2NL-201ENST00000618570 MDM2Q00987 491 aaPredicted RBP13.72□□□□□ -0.21
UBE2NL-201ENST00000618570 ZPR1O75312 459 aa13.71□□□□□ -0.21
UBE2NL-201ENST00000618570 RGS20O76081 388 aa13.71□□□□□ -0.21
UBE2NL-201ENST00000618570 BCANQ96GW7 911 aa13.71□□□□□ -0.21
UBE2NL-201ENST00000618570 GCGRP47871 477 aa13.7□□□□□ -0.22
UBE2NL-201ENST00000618570 NKX2-3Q8TAU0 364 aa13.7□□□□□ -0.22
UBE2NL-201ENST00000618570 TMUB1Q9BVT8 246 aa13.68□□□□□ -0.22
UBE2NL-201ENST00000618570 CD46P15529 392 aa13.67□□□□□ -0.22
UBE2NL-201ENST00000618570 CLCN1P35523 988 aa13.67□□□□□ -0.22
UBE2NL-201ENST00000618570 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
UBE2NL-201ENST00000618570 NR1I2O75469 434 aa13.64□□□□□ -0.23
UBE2NL-201ENST00000618570 FUT2Q10981 343 aa13.64□□□□□ -0.23
UBE2NL-201ENST00000618570 PUS10Q3MIT2 529 aaKnown RBP13.64□□□□□ -0.23
UBE2NL-201ENST00000618570 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
UBE2NL-201ENST00000618570 FAM217BQ9NTX9 383 aaPredicted RBP13.63□□□□□ -0.23
UBE2NL-201ENST00000618570 AMHR2Q16671 573 aa13.62□□□□□ -0.23
UBE2NL-201ENST00000618570 SCUBE3Q8IX30 993 aa13.62□□□□□ -0.23
UBE2NL-201ENST00000618570 REPIN1Q9BWE0 567 aaKnown RBP13.62□□□□□ -0.23
UBE2NL-201ENST00000618570 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
UBE2NL-201ENST00000618570 MORN1Q5T089 497 aa13.61□□□□□ -0.23
UBE2NL-201ENST00000618570 TLL1O43897 1013 aa13.6□□□□□ -0.23
UBE2NL-201ENST00000618570 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.6□□□□□ -0.23
UBE2NL-201ENST00000618570 AK7Q96M32 723 aa13.59□□□□□ -0.23
UBE2NL-201ENST00000618570 TRIM66O15016 1216 aa13.56□□□□□ -0.24
UBE2NL-201ENST00000618570 KDM4AO75164 1064 aa13.55□□□□□ -0.24
UBE2NL-201ENST00000618570 ADH1BP00325 375 aa13.55□□□□□ -0.24
UBE2NL-201ENST00000618570 GGCXP38435 758 aa13.55□□□□□ -0.24
UBE2NL-201ENST00000618570 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
UBE2NL-201ENST00000618570 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
UBE2NL-201ENST00000618570 GRIPAP1Q4V328 841 aa13.54□□□□□ -0.24
UBE2NL-201ENST00000618570 SSTR3P32745 418 aaPredicted RBP13.53□□□□□ -0.24
UBE2NL-201ENST00000618570 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
UBE2NL-201ENST00000618570 SLC24A3Q9HC58 644 aa13.52□□□□□ -0.25
UBE2NL-201ENST00000618570 USP46P62068 366 aa13.51□□□□□ -0.25
UBE2NL-201ENST00000618570 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
UBE2NL-201ENST00000618570 SPSB2Q99619 263 aa13.51□□□□□ -0.25
UBE2NL-201ENST00000618570 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
UBE2NL-201ENST00000618570 RNF223E7ERA6 249 aa13.5□□□□□ -0.25
UBE2NL-201ENST00000618570 S1PR4O95977 384 aa13.5□□□□□ -0.25
UBE2NL-201ENST00000618570 PARP9Q8IXQ6 854 aa13.5□□□□□ -0.25
UBE2NL-201ENST00000618570 FMNL1O95466 1100 aaPredicted RBP13.48□□□□□ -0.25
UBE2NL-201ENST00000618570 BRICD5Q6PL45 260 aa13.48□□□□□ -0.25
UBE2NL-201ENST00000618570 SLC6A16Q9GZN6 736 aa13.48□□□□□ -0.25
UBE2NL-201ENST00000618570 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
UBE2NL-201ENST00000618570 HOXA2O43364 376 aa13.46□□□□□ -0.25
UBE2NL-201ENST00000618570 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
UBE2NL-201ENST00000618570 HLA-CQ95604 372 aa13.45□□□□□ -0.26
UBE2NL-201ENST00000618570 V9GY48 417 aaPredicted RBP13.45□□□□□ -0.26
UBE2NL-201ENST00000618570 PPEF1O14829 653 aaPredicted RBP13.44□□□□□ -0.26
UBE2NL-201ENST00000618570 PDE4DQ08499 809 aa13.44□□□□□ -0.26
UBE2NL-201ENST00000618570 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
UBE2NL-201ENST00000618570 FAM160A2Q8N612 972 aaPredicted RBP13.44□□□□□ -0.26
UBE2NL-201ENST00000618570 ANKLE1Q8NAG6 615 aa13.44□□□□□ -0.26
UBE2NL-201ENST00000618570 Q3C1V9 767 aa13.43□□□□□ -0.26
UBE2NL-201ENST00000618570 MS4A1P11836 297 aa13.41□□□□□ -0.26
UBE2NL-201ENST00000618570 SPIRE2Q8WWL2 714 aa13.41□□□□□ -0.26
UBE2NL-201ENST00000618570 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
UBE2NL-201ENST00000618570 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
UBE2NL-201ENST00000618570 GUCA2AQ02747 115 aa13.39□□□□□ -0.27
UBE2NL-201ENST00000618570 MSS51Q4VC12 460 aa13.39□□□□□ -0.27
UBE2NL-201ENST00000618570 IRX2Q9BZI1 471 aaPredicted RBP13.39□□□□□ -0.27
UBE2NL-201ENST00000618570 PRDM9Q9NQV7 894 aa13.37□□□□□ -0.27
UBE2NL-201ENST00000618570 USB1Q9BQ65 265 aaKnown RBP13.36□□□□□ -0.27
UBE2NL-201ENST00000618570 SLC19A1P41440 591 aa13.35□□□□□ -0.27
UBE2NL-201ENST00000618570 PLA2G2CQ5R387 149 aa13.35□□□□□ -0.27
UBE2NL-201ENST00000618570 FDX1P10109 184 aa13.34□□□□□ -0.27
UBE2NL-201ENST00000618570 PCDHGC3Q9UN70 934 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms