RNA–Protein interactions for RNA: ENST00000618462.4

PDE4DIP-246, Transcript of phosphodiesterase 4D interacting protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-246ENST00000618462 CARMIL1Q5VZK9 1371 aa9.85□□□□□ -0.83
PDE4DIP-246ENST00000618462 RNF214Q8ND24 703 aa9.85□□□□□ -0.83
PDE4DIP-246ENST00000618462 CCDC9Q9Y3X0 531 aaKnown RBP9.85□□□□□ -0.83
PDE4DIP-246ENST00000618462 PANK3Q9H999 370 aa9.85□□□□□ -0.83
PDE4DIP-246ENST00000618462 MARCH6O60337 910 aa9.85□□□□□ -0.83
PDE4DIP-246ENST00000618462 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
PDE4DIP-246ENST00000618462 ACBD3Q9H3P7 528 aa9.84□□□□□ -0.83
PDE4DIP-246ENST00000618462 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
PDE4DIP-246ENST00000618462 H0YHG0 523 aa9.84□□□□□ -0.83
PDE4DIP-246ENST00000618462 TERF2IPQ9NYB0 399 aa9.84□□□□□ -0.83
PDE4DIP-246ENST00000618462 CHMP4CQ96CF2 233 aa9.84□□□□□ -0.83
PDE4DIP-246ENST00000618462 VPS37CA5D8V6 355 aaPredicted RBP9.84□□□□□ -0.84
PDE4DIP-246ENST00000618462 FRAT2O75474 233 aaPredicted RBP9.84□□□□□ -0.84
PDE4DIP-246ENST00000618462 AKAP17AQ02040 695 aaKnown RBP9.84□□□□□ -0.84
PDE4DIP-246ENST00000618462 CAVIN1Q6NZI2 390 aaKnown RBP9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 ANKRD20A12PQ8NF67 263 aa9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 CUX2O14529 1486 aa9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 VPS53Q5VIR6 699 aa9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 ZKSCAN1P17029 563 aaPredicted RBP9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 RDXP35241 583 aaKnown RBP9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 HOOK1Q9UJC3 728 aaKnown RBP9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 DDX19BQ9UMR2 479 aa9.83□□□□□ -0.84
PDE4DIP-246ENST00000618462 SMC3Q9UQE7 1217 aa9.82□□□□□ -0.84
PDE4DIP-246ENST00000618462 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
PDE4DIP-246ENST00000618462 GGT6Q6P531 493 aa9.82□□□□□ -0.84
PDE4DIP-246ENST00000618462 RUFY2Q8WXA3 655 aa9.82□□□□□ -0.84
PDE4DIP-246ENST00000618462 ANO2Q9NQ90 1003 aa9.82□□□□□ -0.84
PDE4DIP-246ENST00000618462 APAF1O14727 1248 aa9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 LNPKQ9C0E8 428 aa9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 TRIM29Q14134 588 aa9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 CPLX2Q6PUV4 134 aaKnown RBP9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 INTS3Q68E01 1043 aaKnown RBP9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 HMGN5P82970 282 aaKnown RBP9.81□□□□□ -0.84
PDE4DIP-246ENST00000618462 MLECQ14165 292 aa9.8□□□□□ -0.84
PDE4DIP-246ENST00000618462 ANKRD30AQ9BXX3 1397 aa9.8□□□□□ -0.84
PDE4DIP-246ENST00000618462 CCDC173Q0VFZ6 552 aa9.8□□□□□ -0.84
PDE4DIP-246ENST00000618462 DZIP1LQ8IYY4 767 aaKnown RBP9.8□□□□□ -0.84
PDE4DIP-246ENST00000618462 NAP1L1P55209 391 aaKnown RBP9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 SYNE3Q6ZMZ3 975 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 SKIDA1Q1XH10 827 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 TRIM5Q9C035 493 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 USP47Q96K76 1375 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 CDR1P51861 262 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 LEKR1Q6ZMV7 388 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 CCDC191Q8NCU4 936 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 NAT10Q9H0A0 1025 aaKnown RBP9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 CPLX1O14810 134 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 FOSBP53539 338 aa9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 MEX3CQ5U5Q3 659 aaKnown RBP9.79□□□□□ -0.84
PDE4DIP-246ENST00000618462 CCDC73Q6ZRK6 1079 aa9.78□□□□□ -0.84
PDE4DIP-246ENST00000618462 PDILTQ8N807 584 aa9.78□□□□□ -0.84
PDE4DIP-246ENST00000618462 AMPHP49418 695 aa9.78□□□□□ -0.84
PDE4DIP-246ENST00000618462 SPC24Q8NBT2 197 aa9.78□□□□□ -0.84
PDE4DIP-246ENST00000618462 RNF20Q5VTR2 975 aa9.78□□□□□ -0.84
PDE4DIP-246ENST00000618462 NACADO15069 1562 aa9.77□□□□□ -0.84
PDE4DIP-246ENST00000618462 TTLL5Q6EMB2 1281 aa9.77□□□□□ -0.84
PDE4DIP-246ENST00000618462 LTV1Q96GA3 475 aaPredicted RBP9.77□□□□□ -0.85
PDE4DIP-246ENST00000618462 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.85
PDE4DIP-246ENST00000618462 UQCRHP07919 91 aa9.77□□□□□ -0.85
PDE4DIP-246ENST00000618462 LRRFIP1Q32MZ4 808 aaKnown RBP9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 SDF4Q9BRK5 362 aa9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 TSPY26PQ9H489 355 aa9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 PANK1Q8TE04 598 aa9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 MAPK8IP2Q13387 824 aaPredicted RBP9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 CAGE1Q8TC20 777 aa9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 C9orf78Q9NZ63 289 aaPredicted RBP9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 TRAK1Q9UPV9 953 aa9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 DCTN1Q14203 1278 aa9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 LETM1O95202 739 aaPredicted RBP9.76□□□□□ -0.85
PDE4DIP-246ENST00000618462 MBD3O95983 291 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 CCDC27Q2M243 656 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 HSP90AB3PQ58FF7 597 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 HOMEZQ8IX15 550 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 CCDC47Q96A33 483 aaKnown RBP9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 ERCC4Q92889 916 aaPredicted RBP9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 TSPYL1Q9H0U9 437 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 USP8P40818 1118 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 GRPEL1Q9HAV7 217 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 OLFM4Q6UX06 510 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 ROCK1Q13464 1354 aa9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 IFIT2P09913 472 aaKnown RBP9.75□□□□□ -0.85
PDE4DIP-246ENST00000618462 TRDNQ13061 729 aa9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 AXDND1Q5T1B0 1012 aaPredicted RBP9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 MPNDQ8N594 471 aa9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 PLCD4Q9BRC7 762 aa9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 KIF21BO75037 1637 aa9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 ESPNB1AK53 854 aa9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
PDE4DIP-246ENST00000618462 CCDC18Q5T9S5 1454 aa9.73□□□□□ -0.85
PDE4DIP-246ENST00000618462 SMC2O95347 1197 aa9.73□□□□□ -0.85
PDE4DIP-246ENST00000618462 WIZO95785 1651 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms